Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
15:37:15 (11656): wrapper (7.7.26015): starting
15:37:15 (11656): wrapper: running run_atlas (--nthreads 5)
[2025-06-03 15:37:15] Arguments: --nthreads 5
[2025-06-03 15:37:15] Threads: 5
[2025-06-03 15:37:15] Checking for CVMFS
[2025-06-03 15:37:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:37:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:37:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:37:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:37:16] 2.13.0.0 10232 2 25352 146755 1 1 3763474 6144001 0 130560 0 0 0.000 1290 638 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-03 15:37:16] CVMFS is ok
[2025-06-03 15:37:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:37:16] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-03 15:37:16] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-03 15:37:16] Further information can be found at the LHC@home message board.
[2025-06-03 15:37:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:37:16] Checking for apptainer binary...
[2025-06-03 15:37:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:37:16] Running /usr/bin/apptainer --version
[2025-06-03 15:37:17] apptainer version 1.3.4
[2025-06-03 15:37:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:37:18] riotskates
[2025-06-03 15:37:18] apptainer works
[2025-06-03 15:37:18] Set ATHENA_PROC_NUMBER=5
[2025-06-03 15:37:18] Set ATHENA_CORE_NUMBER=5
[2025-06-03 15:37:18] Starting ATLAS job with PandaID=6677677570
[2025-06-03 15:37:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:37:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:37:11]  storage_token=
[2025-06-03 16:37:11]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6677677570/log.45006595._037380.job.log.tgz.1
[2025-06-03 16:37:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/cd/log.45006595._037380.job.log.tgz.1
[2025-06-03 16:37:11]  workdir=None
[2025-06-03 16:37:11] ]
[2025-06-03 16:37:11] 2025-06-03 21:36:40,934 | INFO     | transferring file log.45006595._037380.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6677677570/log.45006595._037380.job.log.tgz.1 to /var/lib/boinc
[2025-06-03 16:37:11] 2025-06-03 21:36:40,934 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6677677570/log.45006595._037380.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-03 16:37:11] 2025-06-03 21:36:40,960 | INFO     | adding to output.list: log.45006595._037380.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/cd/log.45006595._037380.job.log.tg
[2025-06-03 16:37:11] 2025-06-03 21:36:40,960 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 16:37:11] 2025-06-03 21:36:40,960 | INFO     | summary of transferred files:
[2025-06-03 16:37:11] 2025-06-03 21:36:40,960 | INFO     |  -- lfn=log.45006595._037380.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 16:37:11] 2025-06-03 21:36:40,961 | INFO     | stage-out finished correctly
[2025-06-03 16:37:11] 2025-06-03 21:36:41,002 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 16:37:11] 2025-06-03 21:36:41,530 | INFO     | monitor loop #274: job 0:6677677570 is in state 'finished'
[2025-06-03 16:37:11] 2025-06-03 21:36:41,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:37:11] 2025-06-03 21:36:43,139 | INFO     | job 6677677570 has state=finished
[2025-06-03 16:37:11] 2025-06-03 21:36:43,140 | INFO     | preparing for final server update for job 6677677570 in state='finished'
[2025-06-03 16:37:11] 2025-06-03 21:36:43,141 | INFO     | this job has now completed (state=finished)
[2025-06-03 16:37:11] 2025-06-03 21:36:43,141 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 16:37:11] 2025-06-03 21:36:43,141 | INFO     | log transfer has been attempted: DONE
[2025-06-03 16:37:11] 2025-06-03 21:36:43,141 | INFO     | job 6677677570 has finished - writing final server update
[2025-06-03 16:37:11] 2025-06-03 21:36:43,141 | INFO     | total number of processed events: 400 (read)
[2025-06-03 16:37:11] 2025-06-03 21:36:43,147 | INFO     | executing command: lscpu
[2025-06-03 16:37:11] 2025-06-03 21:36:43,192 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 16:37:11] 2025-06-03 21:36:44,034 | INFO     | monitor loop #275: job 0:6677677570 is in state 'finished'
[2025-06-03 16:37:11] 2025-06-03 21:36:44,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:37:11] 2025-06-03 21:36:46,537 | INFO     | monitor loop #276: job 0:6677677570 is in state 'finished'
[2025-06-03 16:37:11] 2025-06-03 21:36:46,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:37:11] 2025-06-03 21:36:49,040 | INFO     | monitor loop #277: job 0:6677677570 is in state 'finished'
[2025-06-03 16:37:11] 2025-06-03 21:36:49,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:37:11] 2025-06-03 21:36:50,164 | INFO     | PID=15708 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 16:37:11] 2025-06-03 21:36:51,543 | INFO     | monitor loop #278: job 0:6677677570 is in state 'finished'
[2025-06-03 16:37:11] 2025-06-03 21:36:51,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:37:11] 2025-06-03 21:36:54,046 | INFO     | monitor loop #279: job 0:6677677570 is in state 'finished'
[2025-06-03 16:37:11] 2025-06-03 21:36:54,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:37:11] 2025-06-03 21:36:56,549 | INFO     | monitor loop #280: job 0:6677677570 is in state 'finished'
[2025-06-03 16:37:11] 2025-06-03 21:36:56,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:37:11] 2025-06-03 21:36:59,052 | INFO     | monitor loop #281: job 0:6677677570 is in state 'finished'
[2025-06-03 16:37:11] 2025-06-03 21:36:59,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:37:11] 2025-06-03 21:36:59,726 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 16:37:11] 2025-06-03 21:36:59,727 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6677677570/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:37:11] 2025-06-03 21:36:59,727 | INFO     | extracted standard info from prmon json
[2025-06-03 16:37:11] 2025-06-03 21:36:59,728 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:37:11] 2025-06-03 21:36:59,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:37:11] 2025-06-03 21:36:59,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:37:11] 2025-06-03 21:36:59,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:37:11] 2025-06-03 21:36:59,729 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:37:11] 2025-06-03 21:36:59,730 | INFO     | sum of square deviations: 41117050.0
[2025-06-03 16:37:11] 2025-06-03 21:36:59,730 | INFO     | sum of deviations: -6347248189.0
[2025-06-03 16:37:11] 2025-06-03 21:36:59,730 | INFO     | mean x: 1748984928.0
[2025-06-03 16:37:11] 2025-06-03 21:36:59,730 | INFO     | mean y: 2649819.529411765
[2025-06-03 16:37:11] 2025-06-03 21:36:59,730 | INFO     | -- intersect: 269993843663.35565
[2025-06-03 16:37:11] 2025-06-03 21:36:59,731 | INFO     | intersect: 269993843663.35565
[2025-06-03 16:37:11] 2025-06-03 21:36:59,731 | INFO     | chi2: 0.15241344108914776
[2025-06-03 16:37:11] 2025-06-03 21:36:59,731 | INFO     | -- intersect: 269993843663.35565
[2025-06-03 16:37:11] 2025-06-03 21:36:59,731 | INFO     | current memory leak: -154.37 B/s (using 51 data points, chi2=0.15)
[2025-06-03 16:37:11] 2025-06-03 21:36:59,732 | INFO     | ..............................
[2025-06-03 16:37:11] 2025-06-03 21:36:59,732 | INFO     | . Timing measurements:
[2025-06-03 16:37:11] 2025-06-03 21:36:59,732 | INFO     | . get job = 0 s
[2025-06-03 16:37:11] 2025-06-03 21:36:59,732 | INFO     | . initial setup = 3 s
[2025-06-03 16:37:11] 2025-06-03 21:36:59,732 | INFO     | . payload setup = 10 s
[2025-06-03 16:37:11] 2025-06-03 21:36:59,732 | INFO     | . stage-in = 0 s
[2025-06-03 16:37:11] 2025-06-03 21:36:59,732 | INFO     | . payload execution = 3501 s
[2025-06-03 16:37:11] 2025-06-03 21:36:59,732 | INFO     | . stage-out = 0 s
[2025-06-03 16:37:11] 2025-06-03 21:36:59,732 | INFO     | . log creation = 0 s
[2025-06-03 16:37:11] 2025-06-03 21:36:59,732 | INFO     | ..............................
[2025-06-03 16:37:11] 2025-06-03 21:36:59,803 | INFO     | 
[2025-06-03 16:37:11] 2025-06-03 21:36:59,803 | INFO     | job summary report
[2025-06-03 16:37:11] 2025-06-03 21:36:59,804 | INFO     | --------------------------------------------------
[2025-06-03 16:37:11] 2025-06-03 21:36:59,804 | INFO     | PanDA job id: 6677677570
[2025-06-03 16:37:11] 2025-06-03 21:36:59,804 | INFO     | task id: 45006595
[2025-06-03 16:37:11] 2025-06-03 21:36:59,804 | INFO     | errors: (none)
[2025-06-03 16:37:11] 2025-06-03 21:36:59,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:37:11] 2025-06-03 21:36:59,804 | INFO     | pilot state: finished 
[2025-06-03 16:37:11] 2025-06-03 21:36:59,804 | INFO     | transexitcode: 0
[2025-06-03 16:37:11] 2025-06-03 21:36:59,804 | INFO     | exeerrorcode: 0
[2025-06-03 16:37:11] 2025-06-03 21:36:59,804 | INFO     | exeerrordiag: 
[2025-06-03 16:37:11] 2025-06-03 21:36:59,804 | INFO     | exitcode: 0
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | exitmsg: OK
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | cpuconsumptiontime: 15495 s
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | nevents: 400
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | neventsw: 0
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | pid: 23211
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | pgrp: 23211
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | corecount: 5
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | event service: False
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | sizes: {0: 2405218, 1: 2405218, 6: 2405452, 11: 2405480, 3515: 2431014, 3516: 2431013, 3517: 2440208, 3536: 2440322}
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | --------------------------------------------------
[2025-06-03 16:37:11] 2025-06-03 21:36:59,805 | INFO     | 
[2025-06-03 16:37:11] 2025-06-03 21:36:59,806 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-03 16:37:11] 2025-06-03 21:36:59,834 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,836 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,836 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,836 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,836 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,836 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:37:11] 2025-06-03 21:36:59,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,836 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:37:11] 2025-06-03 21:36:59,836 | INFO     | job 6677677570 has completed (purged errors)
[2025-06-03 16:37:11] 2025-06-03 21:36:59,836 | INFO     | overall cleanup function is called
[2025-06-03 16:37:11] 2025-06-03 21:37:00,846 | INFO     | --- collectZombieJob: --- 10, [23211]
[2025-06-03 16:37:11] 2025-06-03 21:37:00,846 | INFO     | zombie collector waiting for pid 23211
[2025-06-03 16:37:11] 2025-06-03 21:37:00,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:37:11] 2025-06-03 21:37:00,846 | INFO     | collected zombie processes
[2025-06-03 16:37:11] 2025-06-03 21:37:00,847 | INFO     | will attempt to kill all subprocesses of pid=23211
[2025-06-03 16:37:11] 2025-06-03 21:37:00,928 | INFO     | process IDs to be killed: [23211] (in reverse order)
[2025-06-03 16:37:11] 2025-06-03 21:37:00,991 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:37:11] 2025-06-03 21:37:00,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:37:11] 2025-06-03 21:37:00,993 | INFO     | did not find any defunct processes belonging to 23211
[2025-06-03 16:37:11] 2025-06-03 21:37:00,995 | INFO     | did not find any defunct processes belonging to 23211
[2025-06-03 16:37:11] 2025-06-03 21:37:00,995 | INFO     | ready for new job
[2025-06-03 16:37:11] 2025-06-03 21:37:00,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:37:11] 2025-06-03 21:37:00,996 | INFO     | **************************************
[2025-06-03 16:37:11] 2025-06-03 21:37:00,996 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:37:11] 2025-06-03 21:37:00,996 | INFO     | **************************************
[2025-06-03 16:37:11] 2025-06-03 21:37:00,996 | INFO     | 
[2025-06-03 16:37:11] 2025-06-03 21:37:00,996 | INFO     | architecture information:
[2025-06-03 16:37:11] 2025-06-03 21:37:00,997 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:37:11] 2025-06-03 21:37:01,007 | INFO     | cat /etc/os-release:
[2025-06-03 16:37:11] NAME="CentOS Linux"
[2025-06-03 16:37:11] VERSION="7 (Core)"
[2025-06-03 16:37:11] ID="centos"
[2025-06-03 16:37:11] ID_LIKE="rhel fedora"
[2025-06-03 16:37:11] VERSION_ID="7"
[2025-06-03 16:37:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:37:11] ANSI_COLOR="0;31"
[2025-06-03 16:37:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:37:11] HOME_URL="https://www.centos.org/"
[2025-06-03 16:37:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:37:11] 
[2025-06-03 16:37:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:37:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:37:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:37:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:37:11] 
[2025-06-03 16:37:11] 2025-06-03 21:37:01,008 | INFO     | **************************************
[2025-06-03 16:37:11] 2025-06-03 21:37:01,511 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-03 16:37:11] 2025-06-03 21:37:01,535 | INFO     | sufficient remaining disk space (653226147840 B)
[2025-06-03 16:37:11] 2025-06-03 21:37:01,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:37:11] 2025-06-03 21:37:01,535 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:37:11] 2025-06-03 21:37:01,536 | INFO     | update_server=False
[2025-06-03 16:37:11] 2025-06-03 21:37:01,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:37:11] 2025-06-03 21:37:01,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:37:11] 2025-06-03 21:37:01,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:37:11] 2025-06-03 21:37:01,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:37:11] 2025-06-03 21:37:01,555 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 16:37:11] 2025-06-03 21:37:01,555 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 16:37:11] 2025-06-03 21:37:01,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:37:11] 2025-06-03 21:37:01,555 | INFO     | will abort loop
[2025-06-03 16:37:11] 2025-06-03 21:37:01,879 | INFO     | all payload control threads have been joined
[2025-06-03 16:37:11] 2025-06-03 21:37:02,125 | INFO     | all job control threads have been joined
[2025-06-03 16:37:11] 2025-06-03 21:37:02,193 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:37:11] 2025-06-03 21:37:02,193 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:37:11] 2025-06-03 21:37:02,193 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:37:11] 2025-06-03 21:37:02,253 | INFO     | all data control threads have been joined
[2025-06-03 16:37:11] 2025-06-03 21:37:02,542 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:02,542 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:02,561 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:02,842 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:02,885 | INFO     | [payload] control thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:03,117 | INFO     | [job] validate thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:03,131 | INFO     | [job] control thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:03,152 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:03,254 | INFO     | [data] control thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:03,261 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:03,292 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:03,415 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:03,484 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:03,543 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:03,727 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:05,543 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:37:11] 2025-06-03 21:37:06,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131299903031104)>', '<ExcThread(monitor, started 131299255756544)>']
[2025-06-03 16:37:11] 2025-06-03 21:37:07,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:37:11] 2025-06-03 21:37:07,221 | INFO     | [monitor] control thread has ended
[2025-06-03 16:37:11] 2025-06-03 21:37:11,382 | INFO     | all workflow threads have been joined
[2025-06-03 16:37:11] 2025-06-03 21:37:11,382 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:37:11] 2025-06-03 21:37:11,383 | INFO     | traces error code: 0
[2025-06-03 16:37:11] 2025-06-03 21:37:11,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:37:11] 2025-06-03 21:37:11,490 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:37:11] 2025-06-03 21:37:11,493 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:37:11] 2025-06-03 21:37:11,498 [wrapper] pilotpid: 15708
[2025-06-03 16:37:11] 2025-06-03 21:37:11,502 [wrapper] Pilot exit status: 0
[2025-06-03 16:37:11] 2025-06-03 21:37:11,525 [wrapper] pandaids: 6677677570
[2025-06-03 16:37:11] 2025-06-03 21:37:11,579 [wrapper] cleanup supervisor_pilot   32708 15709
[2025-06-03 16:37:11] 2025-06-03 21:37:11,584 [wrapper] Test setup, not cleaning
[2025-06-03 16:37:11] 2025-06-03 21:37:11,588 [wrapper] apfmon messages muted
[2025-06-03 16:37:11] 2025-06-03 21:37:11,593 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:37:11] 2025-06-03 21:37:11,598 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:37:11]  *** Error codes and diagnostics ***
[2025-06-03 16:37:11]     "exeErrorCode": 0,
[2025-06-03 16:37:11]     "exeErrorDiag": "",
[2025-06-03 16:37:11]     "pilotErrorCode": 0,
[2025-06-03 16:37:11]     "pilotErrorDiag": "",
[2025-06-03 16:37:11]  *** Listing of results directory ***
[2025-06-03 16:37:11] total 392612
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc    495897 Jun  3 10:35 pilot3.tar.gz
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc      5111 Jun  3 10:41 queuedata.json
[2025-06-03 16:37:11] -rwx------ 1 boinc boinc     37140 Jun  3 10:42 runpilot2-wrapper.sh
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc       100 Jun  3 15:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:37:11] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 15:37 run_atlas
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc       105 Jun  3 15:37 job.xml
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc      6816 Jun  3 15:37 init_data.xml
[2025-06-03 16:37:11] -rw-r--r-- 2 boinc boinc 215841734 Jun  3 15:37 EVNT.45006593._001502.pool.root.1
[2025-06-03 16:37:11] -rw-r--r-- 2 boinc boinc     15093 Jun  3 15:37 start_atlas.sh
[2025-06-03 16:37:11] drwxrwx--x 2 boinc boinc      4096 Jun  3 15:37 shared
[2025-06-03 16:37:11] -rw-r--r-- 2 boinc boinc    508877 Jun  3 15:37 input.tar.gz
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc         0 Jun  3 15:37 boinc_lockfile
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc      2525 Jun  3 15:37 pandaJob.out
[2025-06-03 16:37:11] -rw------- 1 boinc boinc    986853 Jun  3 15:37 agis_schedconf.cvmfs.json
[2025-06-03 16:37:11] -rw------- 1 boinc boinc   1603667 Jun  3 15:37 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:37:11] drwx------ 4 boinc boinc      4096 Jun  3 15:37 pilot3
[2025-06-03 16:37:11] -rw------- 1 boinc boinc        95 Jun  3 16:36 pilot_heartbeat.json
[2025-06-03 16:37:11] -rw------- 1 boinc boinc 181168595 Jun  3 16:36 HITS.45006595._037380.pool.root.1
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc       529 Jun  3 16:36 boinc_task_state.xml
[2025-06-03 16:37:11] -rw------- 1 boinc boinc      1014 Jun  3 16:36 memory_monitor_summary.json
[2025-06-03 16:37:11] -rw------- 1 boinc boinc    233562 Jun  3 16:36 log.45006595._037380.job.log.tgz.1
[2025-06-03 16:37:11] -rw------- 1 boinc boinc      7662 Jun  3 16:36 heartbeat.json
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc        27 Jun  3 16:37 wrapper_checkpoint.txt
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc      8192 Jun  3 16:37 boinc_mmap_file
[2025-06-03 16:37:11] -rw------- 1 boinc boinc      4547 Jun  3 16:37 pilotlog.txt
[2025-06-03 16:37:11] -rw------- 1 boinc boinc    358110 Jun  3 16:37 log.45006595._037380.job.log.1
[2025-06-03 16:37:11] -rw------- 1 boinc boinc       357 Jun  3 16:37 output.list
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc       620 Jun  3 16:37 runtime_log
[2025-06-03 16:37:11] -rw------- 1 boinc boinc    614400 Jun  3 16:37 result.tar.gz
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc      8726 Jun  3 16:37 runtime_log.err
[2025-06-03 16:37:11] -rw------- 1 boinc boinc       643 Jun  3 16:37 dR3NDmPxig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmm6YKDmnaWGjn.diag
[2025-06-03 16:37:11] -rw-r--r-- 1 boinc boinc     22328 Jun  3 16:37 stderr.txt
[2025-06-03 16:37:11] HITS file was successfully produced:
[2025-06-03 16:37:11] -rw------- 1 boinc boinc 181168595 Jun  3 16:36 shared/HITS.pool.root.1
[2025-06-03 16:37:11]  *** Contents of shared directory: ***
[2025-06-03 16:37:11] total 388832
[2025-06-03 16:37:11] -rw-r--r-- 2 boinc boinc 215841734 Jun  3 15:37 ATLAS.root_0
[2025-06-03 16:37:11] -rw-r--r-- 2 boinc boinc     15093 Jun  3 15:37 start_atlas.sh
[2025-06-03 16:37:11] -rw-r--r-- 2 boinc boinc    508877 Jun  3 15:37 input.tar.gz
[2025-06-03 16:37:11] -rw------- 1 boinc boinc 181168595 Jun  3 16:36 HITS.pool.root.1
[2025-06-03 16:37:11] -rw------- 1 boinc boinc    614400 Jun  3 16:37 result.tar.gz
16:37:13 (11656): run_atlas exited; CPU time 15502.824634
16:37:13 (11656): called boinc_finish(0)

</stderr_txt>
]]>

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