Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:41:04 (916948): wrapper (7.7.26015): starting
13:41:04 (916948): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 13:41:04] Arguments: --nthreads 12
[2025-06-03 13:41:04] Threads: 12
[2025-06-03 13:41:04] Checking for CVMFS
[2025-06-03 13:41:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:41:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:41:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:41:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:41:05] 2.11.5.0 835854 22292 238620 146755 1 400 44840408 45568000 13700 130560 0 226650747 99.818 126002244 31202 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 13:41:05] CVMFS is ok
[2025-06-03 13:41:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:41:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:41:05] Further information can be found at the LHC@home message board.
[2025-06-03 13:41:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:41:05] Checking for apptainer binary...
[2025-06-03 13:41:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:41:05] Running /usr/bin/apptainer --version
[2025-06-03 13:41:05] apptainer version 1.4.0-1.el9
[2025-06-03 13:41:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:41:05] wns0072.triumf.lcg
[2025-06-03 13:41:05] apptainer works
[2025-06-03 13:41:05] Set ATHENA_PROC_NUMBER=12
[2025-06-03 13:41:05] Set ATHENA_CORE_NUMBER=12
[2025-06-03 13:41:05] Starting ATLAS job with PandaID=6677976051
[2025-06-03 13:41:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:45:08]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:45:08] 2025-06-03 20:44:51,502 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:45:08] 2025-06-03 20:44:51,503 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677976051/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | INFO     | extracted standard info from prmon json
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | WARNING  | wrong length of table data, x=[1748983333.0], y=[1786.0] (must be same and length>=4)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | ..............................
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . Timing measurements:
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . get job = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . initial setup = 3 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . payload setup = 12 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . stage-in = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . payload execution = 36 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . stage-out = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . log creation = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | ..............................
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677976051/pilotlog.txt
[2025-06-03 13:45:08] 2025-06-03 20:44:51,548 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 13:45:08] - Log from pilotlog.txt -
[2025-06-03 13:45:08] 2025-06-03 20:44:51,502 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:45:08] 2025-06-03 20:44:51,503 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677976051/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | INFO     | extracted standard info from prmon json
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | WARNING  | wrong length of table data, x=[1748983333.0], y=[1786.0] (must be same and length>=4)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | ..............................
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . Timing measurements:
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . get job = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . initial setup = 3 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . payload setup = 12 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . stage-in = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . payload execution = 36 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . stage-out = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . log creation = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | ..............................
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677976051/pilotlog.txt
[2025-06-03 13:45:08] 2025-06-03 20:44:51,548 | WARNING  | 
[2025-06-03 13:45:08] [begin log extracts]
[2025-06-03 13:45:08] - Log from pilotlog.txt -
[2025-06-03 13:45:08] 2025-06-03 20:44:51,502 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:45:08] 2025-06-03 20:44:51,503 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677976051/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | INFO     | extracted standard info from prmon json
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:45:08] 2025-06-03 20:44:51,504 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | WARNING  | wrong length of table data, x=[1748983333.0], y=[1786.0] (must be same and length>=4)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | ..............................
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . Timing measurements:
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . get job = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . initial setup = 3 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . payload setup = 12 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . stage-in = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . payload execution = 36 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . stage-out = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | . log creation = 0 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | ..............................
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:45:08] 2025-06-03 20:44:51,505 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677976051/pilotlog.txt
[2025-06-03 13:45:08] [end log extracts]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,548 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,549 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 13:45:08] 2025-06-03 20:44:51,798 | INFO     | 
[2025-06-03 13:45:08] 2025-06-03 20:44:51,798 | INFO     | job summary report
[2025-06-03 13:45:08] 2025-06-03 20:44:51,798 | INFO     | --------------------------------------------------
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | PanDA job id: 6677976051
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | task id: 45006595
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 13:42:30,758 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | pilot state: failed 
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | transexitcode: 65
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | exeerrorcode: 65
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | exitcode: 65
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | nevents: 0
[2025-06-03 13:45:08] 2025-06-03 20:44:51,799 | INFO     | neventsw: 0
[2025-06-03 13:45:08] 2025-06-03 20:44:51,800 | INFO     | pid: 935172
[2025-06-03 13:45:08] 2025-06-03 20:44:51,800 | INFO     | pgrp: 935172
[2025-06-03 13:45:08] 2025-06-03 20:44:51,800 | INFO     | corecount: 12
[2025-06-03 13:45:08] 2025-06-03 20:44:51,800 | INFO     | event service: False
[2025-06-03 13:45:08] 2025-06-03 20:44:51,800 | INFO     | sizes: {0: 2404356, 1: 2405038, 2: 2405237, 12: 2405443, 13: 2405471, 52: 2433014, 185: 2433128}
[2025-06-03 13:45:08] 2025-06-03 20:44:51,800 | INFO     | --------------------------------------------------
[2025-06-03 13:45:08] 2025-06-03 20:44:51,800 | INFO     | 
[2025-06-03 13:45:08] 2025-06-03 20:44:51,800 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 13:45:08] 2025-06-03 20:44:51,846 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,847 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,847 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,847 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,847 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,847 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,847 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | job 6677976051 has completed (purged errors)
[2025-06-03 13:45:08] 2025-06-03 20:44:51,848 | INFO     | overall cleanup function is called
[2025-06-03 13:45:08] 2025-06-03 20:44:52,880 | INFO     | --- collectZombieJob: --- 10, [935172]
[2025-06-03 13:45:08] 2025-06-03 20:44:52,880 | INFO     | zombie collector waiting for pid 935172
[2025-06-03 13:45:08] 2025-06-03 20:44:52,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:45:08] 2025-06-03 20:44:52,881 | INFO     | collected zombie processes
[2025-06-03 13:45:08] 2025-06-03 20:44:52,881 | INFO     | will attempt to kill all subprocesses of pid=935172
[2025-06-03 13:45:08] 2025-06-03 20:44:53,137 | INFO     | process IDs to be killed: [935172] (in reverse order)
[2025-06-03 13:45:08] 2025-06-03 20:44:53,243 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:45:08] 2025-06-03 20:44:53,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:45:08] 2025-06-03 20:44:53,252 | INFO     | did not find any defunct processes belonging to 935172
[2025-06-03 13:45:08] 2025-06-03 20:44:53,260 | INFO     | did not find any defunct processes belonging to 935172
[2025-06-03 13:45:08] 2025-06-03 20:44:53,261 | INFO     | ready for new job
[2025-06-03 13:45:08] 2025-06-03 20:44:53,261 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:45:08] 2025-06-03 20:44:53,262 | INFO     | **************************************
[2025-06-03 13:45:08] 2025-06-03 20:44:53,262 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:45:08] 2025-06-03 20:44:53,262 | INFO     | **************************************
[2025-06-03 13:45:08] 2025-06-03 20:44:53,262 | INFO     | 
[2025-06-03 13:45:08] 2025-06-03 20:44:53,264 | INFO     | architecture information:
[2025-06-03 13:45:08] 2025-06-03 20:44:53,268 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:45:08] 2025-06-03 20:44:53,361 | INFO     | cat /etc/os-release:
[2025-06-03 13:45:08] NAME="CentOS Linux"
[2025-06-03 13:45:08] VERSION="7 (Core)"
[2025-06-03 13:45:08] ID="centos"
[2025-06-03 13:45:08] ID_LIKE="rhel fedora"
[2025-06-03 13:45:08] VERSION_ID="7"
[2025-06-03 13:45:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:45:08] ANSI_COLOR="0;31"
[2025-06-03 13:45:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:45:08] HOME_URL="https://www.centos.org/"
[2025-06-03 13:45:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:45:08] 
[2025-06-03 13:45:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:45:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:45:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:45:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:45:08] 
[2025-06-03 13:45:08] 2025-06-03 20:44:53,361 | INFO     | **************************************
[2025-06-03 13:45:08] 2025-06-03 20:44:53,864 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 13:45:08] 2025-06-03 20:44:53,887 | INFO     | sufficient remaining disk space (2055341080576 B)
[2025-06-03 13:45:08] 2025-06-03 20:44:53,887 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:45:08] 2025-06-03 20:44:53,888 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:45:08] 2025-06-03 20:44:53,888 | INFO     | update_server=False
[2025-06-03 13:45:08] 2025-06-03 20:44:53,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:45:08] 2025-06-03 20:44:54,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:45:08] 2025-06-03 20:44:54,082 | INFO     | aborting loop
[2025-06-03 13:45:08] 2025-06-03 20:44:54,167 | INFO     | all data control threads have been joined
[2025-06-03 13:45:08] 2025-06-03 20:44:54,618 | INFO     | all payload control threads have been joined
[2025-06-03 13:45:08] 2025-06-03 20:44:54,760 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:45:08] 2025-06-03 20:44:54,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:45:08] 2025-06-03 20:44:54,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:45:08] 2025-06-03 20:44:54,894 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:54,958 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:55,083 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:55,088 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:55,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:45:08] 2025-06-03 20:44:55,173 | INFO     | [data] control thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:55,338 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:55,477 | INFO     | all job control threads have been joined
[2025-06-03 13:45:08] 2025-06-03 20:44:55,586 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:55,588 | INFO     | [job] validate thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:55,625 | INFO     | [payload] control thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:55,654 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:55,736 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:55,922 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:56,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:45:08] 2025-06-03 20:44:56,483 | INFO     | [job] control thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:56,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:45:08] 2025-06-03 20:44:57,116 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:44:57,818 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:45:00,343 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:45:08] 2025-06-03 20:45:02,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977289508672)>', '<ExcThread(monitor, started 139976968738560)>']
[2025-06-03 13:45:08] 2025-06-03 20:45:02,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:45:08] 2025-06-03 20:45:02,808 | INFO     | [monitor] control thread has ended
[2025-06-03 13:45:08] 2025-06-03 20:45:07,398 | INFO     | all workflow threads have been joined
[2025-06-03 13:45:08] 2025-06-03 20:45:07,398 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:45:08] 2025-06-03 20:45:07,398 | INFO     | traces error code: 0
[2025-06-03 13:45:08] 2025-06-03 20:45:07,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:45:08] 2025-06-03 20:45:07,634 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:45:08] 2025-06-03 20:45:07,636 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:45:08] 2025-06-03 20:45:07,638 [wrapper] pilotpid: 927899
[2025-06-03 13:45:08] 2025-06-03 20:45:07,639 [wrapper] Pilot exit status: 0
[2025-06-03 13:45:08] 2025-06-03 20:45:07,741 [wrapper] pandaids: 6677976051
[2025-06-03 13:45:08] 2025-06-03 20:45:08,040 [wrapper] cleanup supervisor_pilot  927914 927900
[2025-06-03 13:45:08] 2025-06-03 20:45:08,051 [wrapper] Test setup, not cleaning
[2025-06-03 13:45:08] 2025-06-03 20:45:08,063 [wrapper] apfmon messages muted
[2025-06-03 13:45:08] 2025-06-03 20:45:08,065 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:45:08] 2025-06-03 20:45:08,067 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:45:08]  *** Error codes and diagnostics ***
[2025-06-03 13:45:08]     "exeErrorCode": 65,
[2025-06-03 13:45:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 13:45:08]     "pilotErrorCode": 1305,
[2025-06-03 13:45:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 13:45:08]  *** Listing of results directory ***
[2025-06-03 13:45:08] total 214104
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc    495897 Jun  3 11:57 pilot3.tar.gz
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc      5111 Jun  3 12:02 queuedata.json
[2025-06-03 13:45:08] -rwx------. 1 boinc boinc     37140 Jun  3 12:03 runpilot2-wrapper.sh
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc       100 Jun  3 13:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:45:08] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 13:41 run_atlas
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc       105 Jun  3 13:41 job.xml
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc      6602 Jun  3 13:41 init_data.xml
[2025-06-03 13:45:08] -rw-r--r--. 2 boinc boinc 215214179 Jun  3 13:41 EVNT.45006593._001725.pool.root.1
[2025-06-03 13:45:08] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:41 start_atlas.sh
[2025-06-03 13:45:08] drwxrwx--x. 2 boinc boinc      4096 Jun  3 13:41 shared
[2025-06-03 13:45:08] -rw-r--r--. 2 boinc boinc    508884 Jun  3 13:41 input.tar.gz
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc         0 Jun  3 13:41 boinc_lockfile
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc      2525 Jun  3 13:41 pandaJob.out
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc    986853 Jun  3 13:41 agis_schedconf.cvmfs.json
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc   1603667 Jun  3 13:41 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:45:08] drwx------. 4 boinc boinc      4096 Jun  3 13:41 pilot3
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc       522 Jun  3 13:42 boinc_task_state.xml
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc       960 Jun  3 13:42 memory_monitor_summary.json
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc     20792 Jun  3 13:42 log.45006595._043026.job.log.tgz.1
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc        95 Jun  3 13:44 pilot_heartbeat.json
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc      8310 Jun  3 13:44 heartbeat.json
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:45 boinc_mmap_file
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc        22 Jun  3 13:45 wrapper_checkpoint.txt
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc      4352 Jun  3 13:45 pilotlog.txt
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc     77084 Jun  3 13:45 log.45006595._043026.job.log.1
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc       188 Jun  3 13:45 output.list
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc       620 Jun  3 13:45 runtime_log
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc    112640 Jun  3 13:45 result.tar.gz
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc       645 Jun  3 13:45 zXnMDmS6lg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGplKDmXiCqhm.diag
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc      8484 Jun  3 13:45 runtime_log.err
[2025-06-03 13:45:08] -rw-r--r--. 1 boinc boinc     21614 Jun  3 13:45 stderr.txt
[2025-06-03 13:45:08] No HITS result produced
[2025-06-03 13:45:08]  *** Contents of shared directory: ***
[2025-06-03 13:45:08] total 210804
[2025-06-03 13:45:08] -rw-r--r--. 2 boinc boinc 215214179 Jun  3 13:41 ATLAS.root_0
[2025-06-03 13:45:08] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:41 start_atlas.sh
[2025-06-03 13:45:08] -rw-r--r--. 2 boinc boinc    508884 Jun  3 13:41 input.tar.gz
[2025-06-03 13:45:08] -rw-------. 1 boinc boinc    112640 Jun  3 13:45 result.tar.gz
13:45:09 (916948): run_atlas exited; CPU time 24.126250
13:45:09 (916948): called boinc_finish(0)

</stderr_txt>
]]>

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