Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:32 (3590318): wrapper (7.7.26015): starting
03:32:32 (3590318): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 03:32:32] Arguments: --nthreads 3
[2025-06-05 03:32:32] Threads: 3
[2025-06-05 03:32:32] Checking for CVMFS
[2025-06-05 03:32:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:32:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:32:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:32:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:32:33] 2.11.5.0 3563720 124 53096 146791 0 55 24448504 31457280 0 130560 0 71826 99.975 74017 159 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 03:32:33] CVMFS is ok
[2025-06-05 03:32:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:32:33] Checking for apptainer binary...
[2025-06-05 03:32:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:32:33] Running /usr/bin/apptainer --version
[2025-06-05 03:32:33] apptainer version 1.3.4-1.el9
[2025-06-05 03:32:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:32:33] testio001
[2025-06-05 03:32:33] apptainer works
[2025-06-05 03:32:33] Set ATHENA_PROC_NUMBER=3
[2025-06-05 03:32:33] Set ATHENA_CORE_NUMBER=3
[2025-06-05 03:32:33] Starting ATLAS job with PandaID=6677862571
[2025-06-05 03:32:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:21:58]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:21:58] 2025-06-04 20:21:39,214 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:21:58] 2025-06-04 20:21:39,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:21:58] 2025-06-04 20:21:39,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:21:58] 2025-06-04 20:21:39,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:21:58] 2025-06-04 20:21:39,215 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:21:58] 2025-06-04 20:21:39,215 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 05:21:58] 2025-06-04 20:21:39,215 | INFO     | sum of deviations: 14098460605.000004
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | mean x: 1749065184.5
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | mean y: 2348462.754716981
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | -- intersect: -66773639818.4575
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | intersect: -66773639818.4575
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | chi2: 3.700216830268446
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | sum of deviations: 14353653067.999964
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | mean x: 1749065032.0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | mean y: 2349240.3168316833
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | -- intersect: -78587857776.87941
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | intersect: -78587857776.87941
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | chi2: 3.7071714535475944
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | current chi2=3.7071714535475944 (change=-0.18795177683259304 %)
[2025-06-05 05:21:58] 2025-06-04 20:21:39,216 | INFO     | right removable region: 100
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | sum of square deviations: 319447850.0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | sum of deviations: -7904685122.000001
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | mean x: 1749065337.0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | mean y: 2415354.9603960398
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | -- intersect: 43282752808.444016
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | intersect: 43282752808.444016
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | chi2: 1.35518381165051
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | current chi2=1.35518381165051 (change=63.37555678994647 %)
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | sum of deviations: -22924909986.5
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | mean x: 1749065489.5
[2025-06-05 05:21:58] 2025-06-04 20:21:39,217 | INFO     | mean y: 2466122.09375
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | -- intersect: 146175988849.7117
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | intersect: 146175988849.7117
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | chi2: 0.24513484021813436
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | current chi2=0.24513484021813436 (change=81.91132168856275 %)
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | sum of square deviations: 233641590.0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | sum of deviations: -21370624527.0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | mean x: 1749065642.0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | mean y: 2460002.758241758
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | -- intersect: 159985214392.7545
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | intersect: 159985214392.7545
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | chi2: 0.20037533880470187
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | current chi2=0.20037533880470187 (change=18.259135002435002 %)
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | left removable region: 30
[2025-06-05 05:21:58] 2025-06-04 20:21:39,218 | INFO     | sum of square deviations: 106336877.5
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | sum of deviations: -8685213611.0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | mean x: 1749065916.5
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | mean y: 2410356.714285714
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | -- intersect: 142859822212.935
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | intersect: 142859822212.935
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | chi2: 0.16707782827159934
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | -- intersect: 142859822212.935
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | current memory leak: -81.68 B/s (using 70 data points, chi2=0.17)
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | ..............................
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | . Timing measurements:
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | . get job = 0 s
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | . initial setup = 5 s
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | . payload setup = 2 s
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | . stage-in = 0 s
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | . payload execution = 6435 s
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | . stage-out = 0 s
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | . log creation = 0 s
[2025-06-05 05:21:58] 2025-06-04 20:21:39,219 | INFO     | ..............................
[2025-06-05 05:21:58] 2025-06-04 20:21:39,258 | INFO     | 
[2025-06-05 05:21:58] 2025-06-04 20:21:39,258 | INFO     | job summary report
[2025-06-05 05:21:58] 2025-06-04 20:21:39,258 | INFO     | --------------------------------------------------
[2025-06-05 05:21:58] 2025-06-04 20:21:39,258 | INFO     | PanDA job id: 6677862571
[2025-06-05 05:21:58] 2025-06-04 20:21:39,258 | INFO     | task id: 45006595
[2025-06-05 05:21:58] 2025-06-04 20:21:39,258 | INFO     | errors: (none)
[2025-06-05 05:21:58] 2025-06-04 20:21:39,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | pilot state: finished 
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | transexitcode: 0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | exeerrorcode: 0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | exeerrordiag: 
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | exitcode: 0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | exitmsg: OK
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | cpuconsumptiontime: 16447 s
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | nevents: 400
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | neventsw: 0
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | pid: 3600244
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | pgrp: 3600244
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | corecount: 3
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | event service: False
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | sizes: {0: 2397342, 2: 2397548, 11: 2397576, 6441: 2424483, 6442: 2433479, 6443: 2433479, 6523: 2433777}
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | --------------------------------------------------
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | 
[2025-06-05 05:21:58] 2025-06-04 20:21:39,259 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,270 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:21:58] 2025-06-04 20:21:39,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,270 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:21:58] 2025-06-04 20:21:39,270 | INFO     | job 6677862571 has completed (purged errors)
[2025-06-05 05:21:58] 2025-06-04 20:21:39,270 | INFO     | overall cleanup function is called
[2025-06-05 05:21:58] 2025-06-04 20:21:40,142 | INFO     | PID=3593903 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 05:21:58] 2025-06-04 20:21:40,275 | INFO     | --- collectZombieJob: --- 10, [3600244]
[2025-06-05 05:21:58] 2025-06-04 20:21:40,275 | INFO     | zombie collector waiting for pid 3600244
[2025-06-05 05:21:58] 2025-06-04 20:21:40,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:21:58] 2025-06-04 20:21:40,275 | INFO     | collected zombie processes
[2025-06-05 05:21:58] 2025-06-04 20:21:40,275 | INFO     | will attempt to kill all subprocesses of pid=3600244
[2025-06-05 05:21:58] 2025-06-04 20:21:40,306 | INFO     | process IDs to be killed: [3600244] (in reverse order)
[2025-06-05 05:21:58] 2025-06-04 20:21:40,324 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:21:58] 2025-06-04 20:21:40,324 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:21:58] 2025-06-04 20:21:40,325 | INFO     | did not find any defunct processes belonging to 3600244
[2025-06-05 05:21:58] 2025-06-04 20:21:40,326 | INFO     | did not find any defunct processes belonging to 3600244
[2025-06-05 05:21:58] 2025-06-04 20:21:40,326 | INFO     | ready for new job
[2025-06-05 05:21:58] 2025-06-04 20:21:40,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:21:58] 2025-06-04 20:21:40,327 | INFO     | **************************************
[2025-06-05 05:21:58] 2025-06-04 20:21:40,327 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:21:58] 2025-06-04 20:21:40,327 | INFO     | **************************************
[2025-06-05 05:21:58] 2025-06-04 20:21:40,327 | INFO     | 
[2025-06-05 05:21:58] 2025-06-04 20:21:40,339 | INFO     | architecture information:
[2025-06-05 05:21:58] 2025-06-04 20:21:40,339 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:21:58] 2025-06-04 20:21:40,347 | INFO     | cat /etc/os-release:
[2025-06-05 05:21:58] NAME="CentOS Linux"
[2025-06-05 05:21:58] VERSION="7 (Core)"
[2025-06-05 05:21:58] ID="centos"
[2025-06-05 05:21:58] ID_LIKE="rhel fedora"
[2025-06-05 05:21:58] VERSION_ID="7"
[2025-06-05 05:21:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:21:58] ANSI_COLOR="0;31"
[2025-06-05 05:21:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:21:58] HOME_URL="https://www.centos.org/"
[2025-06-05 05:21:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:21:58] 
[2025-06-05 05:21:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:21:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:21:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:21:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:21:58] 
[2025-06-05 05:21:58] 2025-06-04 20:21:40,347 | INFO     | **************************************
[2025-06-05 05:21:58] 2025-06-04 20:21:40,849 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-05 05:21:58] 2025-06-04 20:21:40,857 | INFO     | sufficient remaining disk space (126917541888 B)
[2025-06-05 05:21:58] 2025-06-04 20:21:40,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:21:58] 2025-06-04 20:21:40,858 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:21:58] 2025-06-04 20:21:40,858 | INFO     | update_server=False
[2025-06-05 05:21:58] 2025-06-04 20:21:40,858 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:21:58] 2025-06-04 20:21:40,858 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:21:58] 2025-06-04 20:21:40,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:21:58] 2025-06-04 20:21:40,858 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:21:58] 2025-06-04 20:21:40,858 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:21:58] 2025-06-04 20:21:40,858 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:21:58] 2025-06-04 20:21:41,176 | INFO     | all payload control threads have been joined
[2025-06-05 05:21:58] 2025-06-04 20:21:41,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:21:58] 2025-06-04 20:21:41,199 | INFO     | aborting loop
[2025-06-05 05:21:58] 2025-06-04 20:21:41,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:21:58] 2025-06-04 20:21:41,862 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:41,863 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:41,940 | INFO     | all data control threads have been joined
[2025-06-05 05:21:58] 2025-06-04 20:21:42,017 | INFO     | [job] validate thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:42,026 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:42,123 | INFO     | all job control threads have been joined
[2025-06-05 05:21:58] 2025-06-04 20:21:42,181 | INFO     | [payload] control thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:42,204 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:42,381 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:42,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:21:58] 2025-06-04 20:21:42,665 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:42,719 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:42,945 | INFO     | [data] control thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:43,119 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:43,127 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:43,128 | INFO     | [job] control thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:43,553 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:46,445 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:51,163 | INFO     | job.realtimelogging is not enabled
[2025-06-05 05:21:58] 2025-06-04 20:21:52,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:21:58] 2025-06-04 20:21:53,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140151318456128)>', '<ExcThread(monitor, started 140150537443072)>']
[2025-06-05 05:21:58] 2025-06-04 20:21:53,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:21:58] 2025-06-04 20:21:53,923 | INFO     | [monitor] control thread has ended
[2025-06-05 05:21:58] 2025-06-04 20:21:58,135 | INFO     | all workflow threads have been joined
[2025-06-05 05:21:58] 2025-06-04 20:21:58,135 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:21:58] 2025-06-04 20:21:58,135 | INFO     | traces error code: 0
[2025-06-05 05:21:58] 2025-06-04 20:21:58,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:21:58] 2025-06-04 20:21:58,195 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:21:58] 2025-06-04 20:21:58,197 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:21:58] 2025-06-04 20:21:58,198 [wrapper] pilotpid: 3593903
[2025-06-05 05:21:58] 2025-06-04 20:21:58,200 [wrapper] Pilot exit status: 0
[2025-06-05 05:21:58] 2025-06-04 20:21:58,205 [wrapper] pandaids: 6677862571
[2025-06-05 05:21:58] 2025-06-04 20:21:58,217 [wrapper] cleanup supervisor_pilot 3614030 3593904
[2025-06-05 05:21:58] 2025-06-04 20:21:58,219 [wrapper] Test setup, not cleaning
[2025-06-05 05:21:58] 2025-06-04 20:21:58,220 [wrapper] apfmon messages muted
[2025-06-05 05:21:58] 2025-06-04 20:21:58,221 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:21:58] 2025-06-04 20:21:58,223 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:21:58]  *** Error codes and diagnostics ***
[2025-06-05 05:21:58]     "exeErrorCode": 0,
[2025-06-05 05:21:58]     "exeErrorDiag": "",
[2025-06-05 05:21:58]     "pilotErrorCode": 0,
[2025-06-05 05:21:58]     "pilotErrorDiag": "",
[2025-06-05 05:21:58]  *** Listing of results directory ***
[2025-06-05 05:21:58] total 385380
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:25 queuedata.json
[2025-06-05 05:21:58] -rwx------. 1 boinc boinc     37140 Jun  4 02:25 runpilot2-wrapper.sh
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc       100 Jun  5 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:21:58] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 03:32 run_atlas
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc       105 Jun  5 03:32 job.xml
[2025-06-05 05:21:58] -rw-r--r--. 2 boinc boinc 214936329 Jun  5 03:32 EVNT.45006593._001625.pool.root.1
[2025-06-05 05:21:58] -rw-r--r--. 2 boinc boinc     15093 Jun  5 03:32 start_atlas.sh
[2025-06-05 05:21:58] drwxrwx--x. 2 boinc boinc        68 Jun  5 03:32 shared
[2025-06-05 05:21:58] -rw-r--r--. 2 boinc boinc    508878 Jun  5 03:32 input.tar.gz
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc      9292 Jun  5 03:32 init_data.xml
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc         0 Jun  5 03:32 boinc_lockfile
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc      2525 Jun  5 03:32 pandaJob.out
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc    990984 Jun  5 03:32 agis_schedconf.cvmfs.json
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc   1598969 Jun  5 03:32 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:21:58] drwx------. 4 boinc boinc      4096 Jun  5 03:32 pilot3
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc 174162278 Jun  5 05:19 HITS.45006595._040561.pool.root.1
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc       529 Jun  5 05:20 boinc_task_state.xml
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc      1016 Jun  5 05:20 memory_monitor_summary.json
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc    249725 Jun  5 05:20 log.45006595._040561.job.log.tgz.1
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc        95 Jun  5 05:21 pilot_heartbeat.json
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc      7673 Jun  5 05:21 heartbeat.json
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc        27 Jun  5 05:21 wrapper_checkpoint.txt
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc      8192 Jun  5 05:21 boinc_mmap_file
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc      4549 Jun  5 05:21 pilotlog.txt
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc    602907 Jun  5 05:21 log.45006595._040561.job.log.1
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc       357 Jun  5 05:21 output.list
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:21 runtime_log
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc    870400 Jun  5 05:21 result.tar.gz
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc      8617 Jun  5 05:21 runtime_log.err
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc       642 Jun  5 05:21 bihMDmTZkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpNlKDmTW4TOm.diag
[2025-06-05 05:21:58] -rw-r--r--. 1 boinc boinc     20566 Jun  5 05:21 stderr.txt
[2025-06-05 05:21:58] HITS file was successfully produced:
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc 174162278 Jun  5 05:19 shared/HITS.pool.root.1
[2025-06-05 05:21:58]  *** Contents of shared directory: ***
[2025-06-05 05:21:58] total 381352
[2025-06-05 05:21:58] -rw-r--r--. 2 boinc boinc 214936329 Jun  5 03:32 ATLAS.root_0
[2025-06-05 05:21:58] -rw-r--r--. 2 boinc boinc     15093 Jun  5 03:32 start_atlas.sh
[2025-06-05 05:21:58] -rw-r--r--. 2 boinc boinc    508878 Jun  5 03:32 input.tar.gz
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc 174162278 Jun  5 05:19 HITS.pool.root.1
[2025-06-05 05:21:58] -rw-------. 1 boinc boinc    870400 Jun  5 05:21 result.tar.gz
05:22:00 (3590318): run_atlas exited; CPU time 16461.466633
05:22:00 (3590318): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN