Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:54:29 (1784): wrapper (7.7.26015): starting
09:54:29 (1784): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 09:54:29] Arguments: --nthreads 8
[2025-06-04 09:54:29] Threads: 8
[2025-06-04 09:54:29] Checking for CVMFS
[2025-06-04 09:54:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:54:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:54:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:54:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:54:31] 2.11.2.0 11201 32947 89616 146772 2 52 19100834 25165825 3359 130560 0 17068525 99.773 20631289 2078 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 09:54:31] CVMFS is ok
[2025-06-04 09:54:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:54:31] Checking for apptainer binary...
[2025-06-04 09:54:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 09:54:31] Running /usr/bin/apptainer --version
[2025-06-04 09:54:31] apptainer version 1.3.2-1.el7
[2025-06-04 09:54:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:25:07] cg-vwn265.simple-grid.lan
[2025-06-04 10:25:07] apptainer works
[2025-06-04 10:25:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:25:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:25:07] Starting ATLAS job with PandaID=6677862568
[2025-06-04 10:25:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:31:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:31:37] 2025-06-04 12:29:49,535 | INFO     | extracted standard info from prmon json
[2025-06-04 14:31:37] 2025-06-04 12:29:49,535 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:31:37] 2025-06-04 12:29:49,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:31:37] 2025-06-04 12:29:49,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:31:37] 2025-06-04 12:29:49,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:31:37] 2025-06-04 12:29:49,543 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:31:37] 2025-06-04 12:29:49,544 | INFO     | sum of square deviations: 3675152766.9956164
[2025-06-04 14:31:37] 2025-06-04 12:29:49,546 | INFO     | sum of deviations: 63405556357.49121
[2025-06-04 14:31:37] 2025-06-04 12:29:49,546 | INFO     | mean x: 1749033124.504386
[2025-06-04 14:31:37] 2025-06-04 12:29:49,546 | INFO     | mean y: 2452557.50877193
[2025-06-04 14:31:37] 2025-06-04 12:29:49,546 | INFO     | -- intersect: -30172733449.12344
[2025-06-04 14:31:37] 2025-06-04 12:29:49,546 | INFO     | intersect: -30172733449.12344
[2025-06-04 14:31:37] 2025-06-04 12:29:49,547 | INFO     | chi2: 5.727170552996397
[2025-06-04 14:31:37] 2025-06-04 12:29:49,547 | INFO     | sum of square deviations: 3438627706.9955006
[2025-06-04 14:31:37] 2025-06-04 12:29:49,549 | INFO     | sum of deviations: 62015476199.748856
[2025-06-04 14:31:37] 2025-06-04 12:29:49,549 | INFO     | mean x: 1749032972.0044844
[2025-06-04 14:31:37] 2025-06-04 12:29:49,550 | INFO     | mean y: 2451661.2511210763
[2025-06-04 14:31:37] 2025-06-04 12:29:49,550 | INFO     | -- intersect: -31541269232.7718
[2025-06-04 14:31:37] 2025-06-04 12:29:49,550 | INFO     | intersect: -31541269232.7718
[2025-06-04 14:31:37] 2025-06-04 12:29:49,550 | INFO     | chi2: 5.736723468449235
[2025-06-04 14:31:37] 2025-06-04 12:29:49,550 | INFO     | current chi2=5.736723468449235 (change=-0.1667999121807228 %)
[2025-06-04 14:31:37] 2025-06-04 12:29:49,550 | INFO     | right removable region: 222
[2025-06-04 14:31:37] 2025-06-04 12:29:49,551 | INFO     | sum of square deviations: 3438627096.9955006
[2025-06-04 14:31:37] 2025-06-04 12:29:49,553 | INFO     | sum of deviations: -14945539195.51568
[2025-06-04 14:31:37] 2025-06-04 12:29:49,553 | INFO     | mean x: 1749033277.0044844
[2025-06-04 14:31:37] 2025-06-04 12:29:49,553 | INFO     | mean y: 2503028.515695067
[2025-06-04 14:31:37] 2025-06-04 12:29:49,553 | INFO     | -- intersect: 7604445506.829725
[2025-06-04 14:31:37] 2025-06-04 12:29:49,553 | INFO     | intersect: 7604445506.829725
[2025-06-04 14:31:37] 2025-06-04 12:29:49,553 | INFO     | chi2: 0.9845437381445393
[2025-06-04 14:31:37] 2025-06-04 12:29:49,554 | INFO     | current chi2=0.9845437381445393 (change=82.80924709620466 %)
[2025-06-04 14:31:37] 2025-06-04 12:29:49,554 | INFO     | sum of square deviations: 3212473714.4954004
[2025-06-04 14:31:37] 2025-06-04 12:29:49,556 | INFO     | sum of deviations: -41241574360.73394
[2025-06-04 14:31:37] 2025-06-04 12:29:49,556 | INFO     | mean x: 1749033429.5045872
[2025-06-04 14:31:37] 2025-06-04 12:29:49,556 | INFO     | mean y: 2520608.2339449544
[2025-06-04 14:31:37] 2025-06-04 12:29:49,556 | INFO     | -- intersect: 22456522929.511524
[2025-06-04 14:31:37] 2025-06-04 12:29:49,556 | INFO     | intersect: 22456522929.511524
[2025-06-04 14:31:37] 2025-06-04 12:29:49,556 | INFO     | chi2: 0.20007062764203318
[2025-06-04 14:31:37] 2025-06-04 12:29:49,557 | INFO     | current chi2=0.20007062764203318 (change=79.67884819225155 %)
[2025-06-04 14:31:37] 2025-06-04 12:29:49,557 | INFO     | sum of square deviations: 2996460056.9952865
[2025-06-04 14:31:37] 2025-06-04 12:29:49,559 | INFO     | sum of deviations: -37072852404.708916
[2025-06-04 14:31:37] 2025-06-04 12:29:49,559 | INFO     | mean x: 1749033582.004695
[2025-06-04 14:31:37] 2025-06-04 12:29:49,559 | INFO     | mean y: 2517637.708920188
[2025-06-04 14:31:37] 2025-06-04 12:29:49,559 | INFO     | -- intersect: 21641939690.128887
[2025-06-04 14:31:37] 2025-06-04 12:29:49,559 | INFO     | intersect: 21641939690.128887
[2025-06-04 14:31:37] 2025-06-04 12:29:49,559 | INFO     | chi2: 0.18860942151497198
[2025-06-04 14:31:37] 2025-06-04 12:29:49,560 | INFO     | current chi2=0.18860942151497198 (change=5.728580083013291 %)
[2025-06-04 14:31:37] 2025-06-04 12:29:49,560 | INFO     | left removable region: 30
[2025-06-04 14:31:37] 2025-06-04 12:29:49,560 | INFO     | sum of square deviations: 2194680753.9948006
[2025-06-04 14:31:37] 2025-06-04 12:29:49,561 | INFO     | sum of deviations: -14256254880.088537
[2025-06-04 14:31:37] 2025-06-04 12:29:49,561 | INFO     | mean x: 1749033856.5052083
[2025-06-04 14:31:37] 2025-06-04 12:29:49,562 | INFO     | mean y: 2500321.5885416665
[2025-06-04 14:31:37] 2025-06-04 12:29:49,562 | INFO     | -- intersect: 11363912411.641216
[2025-06-04 14:31:37] 2025-06-04 12:29:49,562 | INFO     | intersect: 11363912411.641216
[2025-06-04 14:31:37] 2025-06-04 12:29:49,562 | INFO     | chi2: 0.11574089852701415
[2025-06-04 14:31:37] 2025-06-04 12:29:49,562 | INFO     | -- intersect: 11363912411.641216
[2025-06-04 14:31:37] 2025-06-04 12:29:49,562 | INFO     | current memory leak: -6.50 B/s (using 192 data points, chi2=0.12)
[2025-06-04 14:31:37] 2025-06-04 12:29:49,563 | INFO     | ..............................
[2025-06-04 14:31:37] 2025-06-04 12:29:49,563 | INFO     | . Timing measurements:
[2025-06-04 14:31:37] 2025-06-04 12:29:49,564 | INFO     | . get job = 0 s
[2025-06-04 14:31:37] 2025-06-04 12:29:49,564 | INFO     | . initial setup = 9 s
[2025-06-04 14:31:37] 2025-06-04 12:29:49,564 | INFO     | . payload setup = 164 s
[2025-06-04 14:31:37] 2025-06-04 12:29:49,564 | INFO     | . stage-in = 0 s
[2025-06-04 14:31:37] 2025-06-04 12:29:49,564 | INFO     | . payload execution = 14052 s
[2025-06-04 14:31:37] 2025-06-04 12:29:49,564 | INFO     | . stage-out = 1 s
[2025-06-04 14:31:37] 2025-06-04 12:29:49,564 | INFO     | . log creation = 0 s
[2025-06-04 14:31:37] 2025-06-04 12:29:49,564 | INFO     | ..............................
[2025-06-04 14:31:37] 2025-06-04 12:29:49,694 | INFO     | 
[2025-06-04 14:31:37] 2025-06-04 12:29:49,695 | INFO     | job summary report
[2025-06-04 14:31:37] 2025-06-04 12:29:49,695 | INFO     | --------------------------------------------------
[2025-06-04 14:31:37] 2025-06-04 12:29:49,695 | INFO     | PanDA job id: 6677862568
[2025-06-04 14:31:37] 2025-06-04 12:29:49,695 | INFO     | task id: 45006595
[2025-06-04 14:31:37] 2025-06-04 12:29:49,695 | INFO     | errors: (none)
[2025-06-04 14:31:37] 2025-06-04 12:29:49,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:31:37] 2025-06-04 12:29:49,695 | INFO     | pilot state: finished 
[2025-06-04 14:31:37] 2025-06-04 12:29:49,695 | INFO     | transexitcode: 0
[2025-06-04 14:31:37] 2025-06-04 12:29:49,696 | INFO     | exeerrorcode: 0
[2025-06-04 14:31:37] 2025-06-04 12:29:49,696 | INFO     | exeerrordiag: 
[2025-06-04 14:31:37] 2025-06-04 12:29:49,696 | INFO     | exitcode: 0
[2025-06-04 14:31:37] 2025-06-04 12:29:49,696 | INFO     | exitmsg: OK
[2025-06-04 14:31:37] 2025-06-04 12:29:49,696 | INFO     | cpuconsumptiontime: 50520 s
[2025-06-04 14:31:37] 2025-06-04 12:29:49,696 | INFO     | nevents: 400
[2025-06-04 14:31:37] 2025-06-04 12:29:49,696 | INFO     | neventsw: 0
[2025-06-04 14:31:37] 2025-06-04 12:29:49,696 | INFO     | pid: 27428
[2025-06-04 14:31:37] 2025-06-04 12:29:49,696 | INFO     | pgrp: 27428
[2025-06-04 14:31:37] 2025-06-04 12:29:49,696 | INFO     | corecount: 8
[2025-06-04 14:31:37] 2025-06-04 12:29:49,697 | INFO     | event service: False
[2025-06-04 14:31:37] 2025-06-04 12:29:49,697 | INFO     | sizes: {0: 2404957, 1: 2405041, 2: 2405240, 12: 2405240, 23: 2405268, 34: 2405296, 45: 2405452, 55: 2405480, 66: 2405508, 77: 2405770, 88: 2405798, 14221: 2435793,
[2025-06-04 14:31:37] 2025-06-04 12:29:49,697 | INFO     | --------------------------------------------------
[2025-06-04 14:31:37] 2025-06-04 12:29:49,697 | INFO     | 
[2025-06-04 14:31:37] 2025-06-04 12:29:49,697 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 14:31:37] 2025-06-04 12:29:50,254 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,257 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:31:37] 2025-06-04 12:29:50,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:31:37] 2025-06-04 12:29:50,257 | INFO     | job 6677862568 has completed (purged errors)
[2025-06-04 14:31:37] 2025-06-04 12:29:50,257 | INFO     | overall cleanup function is called
[2025-06-04 14:31:37] 2025-06-04 12:29:51,267 | INFO     | --- collectZombieJob: --- 10, [27428]
[2025-06-04 14:31:37] 2025-06-04 12:29:51,267 | INFO     | zombie collector waiting for pid 27428
[2025-06-04 14:31:37] 2025-06-04 12:29:51,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:31:37] 2025-06-04 12:29:51,267 | INFO     | collected zombie processes
[2025-06-04 14:31:37] 2025-06-04 12:29:51,267 | INFO     | will attempt to kill all subprocesses of pid=27428
[2025-06-04 14:31:37] 2025-06-04 12:29:51,382 | INFO     | process IDs to be killed: [27428] (in reverse order)
[2025-06-04 14:31:37] 2025-06-04 12:29:52,366 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:31:37] 2025-06-04 12:29:52,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:31:37] 2025-06-04 12:29:52,376 | INFO     | did not find any defunct processes belonging to 27428
[2025-06-04 14:31:37] 2025-06-04 12:29:52,380 | INFO     | did not find any defunct processes belonging to 27428
[2025-06-04 14:31:37] 2025-06-04 12:29:52,380 | INFO     | ready for new job
[2025-06-04 14:31:37] 2025-06-04 12:29:52,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:31:37] 2025-06-04 12:29:52,383 | INFO     | **************************************
[2025-06-04 14:31:37] 2025-06-04 12:29:52,383 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:31:37] 2025-06-04 12:29:52,383 | INFO     | **************************************
[2025-06-04 14:31:37] 2025-06-04 12:29:52,383 | INFO     | 
[2025-06-04 14:31:37] 2025-06-04 12:29:52,384 | INFO     | pilot is running in a VM
[2025-06-04 14:31:37] 2025-06-04 12:29:52,384 | INFO     | architecture information:
[2025-06-04 14:31:37] 2025-06-04 12:29:52,390 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:31:37] 2025-06-04 12:29:52,586 | INFO     | cat /etc/os-release:
[2025-06-04 14:31:37] NAME="CentOS Linux"
[2025-06-04 14:31:37] VERSION="7 (Core)"
[2025-06-04 14:31:37] ID="centos"
[2025-06-04 14:31:37] ID_LIKE="rhel fedora"
[2025-06-04 14:31:37] VERSION_ID="7"
[2025-06-04 14:31:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:31:37] ANSI_COLOR="0;31"
[2025-06-04 14:31:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:31:37] HOME_URL="https://www.centos.org/"
[2025-06-04 14:31:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:31:37] 
[2025-06-04 14:31:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:31:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:31:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:31:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:31:37] 
[2025-06-04 14:31:37] 2025-06-04 12:29:52,586 | INFO     | **************************************
[2025-06-04 14:31:37] 2025-06-04 12:29:53,090 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 14:31:37] 2025-06-04 12:29:53,253 | INFO     | sufficient remaining disk space (496796434432 B)
[2025-06-04 14:31:37] 2025-06-04 12:29:53,254 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:31:37] 2025-06-04 12:29:53,254 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:31:37] 2025-06-04 12:29:53,254 | INFO     | update_server=False
[2025-06-04 14:31:37] 2025-06-04 12:29:53,254 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:31:37] 2025-06-04 12:29:53,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:31:37] 2025-06-04 12:29:53,258 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:31:37] 2025-06-04 12:29:53,258 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:31:37] 2025-06-04 12:29:53,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:31:37] 2025-06-04 12:29:53,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:31:37] 2025-06-04 12:29:53,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:31:37] 2025-06-04 12:29:53,265 | INFO     | aborting loop
[2025-06-04 14:31:37] 2025-06-04 12:29:53,940 | INFO     | all data control threads have been joined
[2025-06-04 14:31:37] 2025-06-04 12:29:54,020 | INFO     | all payload control threads have been joined
[2025-06-04 14:31:37] 2025-06-04 12:29:54,260 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:54,271 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:54,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:31:37] 2025-06-04 12:29:54,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:31:37] 2025-06-04 12:29:54,867 | INFO     | all job control threads have been joined
[2025-06-04 14:31:37] 2025-06-04 12:29:54,880 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:54,892 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:54,946 | INFO     | [data] control thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:55,007 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:55,026 | INFO     | [payload] control thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:55,042 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:55,233 | INFO     | [job] validate thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:55,262 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:55,364 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:55,500 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:55,612 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:55,714 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:55,874 | INFO     | [job] control thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:58,454 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:31:37] 2025-06-04 12:29:59,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139829931464512)>', '<ExcThread(monitor, started 139828893050624)>']
[2025-06-04 14:31:37] 2025-06-04 12:29:59,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:31:37] 2025-06-04 12:29:59,293 | INFO     | [monitor] control thread has ended
[2025-06-04 14:31:37] 2025-06-04 12:30:04,120 | INFO     | all workflow threads have been joined
[2025-06-04 14:31:37] 2025-06-04 12:30:04,120 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:31:37] 2025-06-04 12:30:04,120 | INFO     | traces error code: 0
[2025-06-04 14:31:37] 2025-06-04 12:30:04,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:31:37] 2025-06-04 12:30:04,500 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:31:37] 2025-06-04 12:30:04,590 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:31:37] 2025-06-04 12:30:04,690 [wrapper] pilotpid: 18785
[2025-06-04 14:31:37] 2025-06-04 12:30:04,809 [wrapper] Pilot exit status: 0
[2025-06-04 14:31:37] 2025-06-04 12:30:05,291 [wrapper] pandaids: 6677862568
[2025-06-04 14:31:37] 2025-06-04 12:30:06,040 [wrapper] cleanup supervisor_pilot  2706 18786
[2025-06-04 14:31:37] 2025-06-04 12:30:06,137 [wrapper] Test setup, not cleaning
[2025-06-04 14:31:37] 2025-06-04 12:30:06,213 [wrapper] apfmon messages muted
[2025-06-04 14:31:37] 2025-06-04 12:30:06,269 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:31:37] 2025-06-04 12:30:06,360 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:31:37]  *** Error codes and diagnostics ***
[2025-06-04 14:31:37]     "exeErrorCode": 0,
[2025-06-04 14:31:37]     "exeErrorDiag": "",
[2025-06-04 14:31:37]     "pilotErrorCode": 0,
[2025-06-04 14:31:37]     "pilotErrorDiag": "",
[2025-06-04 14:31:37]  *** Listing of results directory ***
[2025-06-04 14:31:37] total 390364
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:25 queuedata.json
[2025-06-04 14:31:37] -rwx------. 1 boinc boinc     37140 Jun  3 19:25 runpilot2-wrapper.sh
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc       100 Jun  4 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:31:37] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 09:54 run_atlas
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc       105 Jun  4 09:54 job.xml
[2025-06-04 14:31:37] -rw-r--r--. 2 boinc boinc 214936329 Jun  4 09:54 EVNT.45006593._001625.pool.root.1
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc      6391 Jun  4 09:54 init_data.xml
[2025-06-04 14:31:37] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:54 start_atlas.sh
[2025-06-04 14:31:37] drwxrwx--x. 2 boinc boinc        68 Jun  4 09:54 shared
[2025-06-04 14:31:37] -rw-r--r--. 2 boinc boinc    508877 Jun  4 09:54 input.tar.gz
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc         0 Jun  4 09:54 boinc_lockfile
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc      2525 Jun  4 10:25 pandaJob.out
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc    986774 Jun  4 10:28 agis_schedconf.cvmfs.json
[2025-06-04 14:31:37] drwx------. 4 boinc boinc      4096 Jun  4 10:28 pilot3
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc 177719394 Jun  4 14:27 HITS.45006595._040558.pool.root.1
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc       531 Jun  4 14:28 boinc_task_state.xml
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc      1020 Jun  4 14:28 memory_monitor_summary.json
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc   1598969 Jun  4 14:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc    392947 Jun  4 14:28 log.45006595._040558.job.log.tgz.1
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc        95 Jun  4 14:28 pilot_heartbeat.json
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc      7690 Jun  4 14:29 heartbeat.json
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc      4539 Jun  4 14:30 pilotlog.txt
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc   1233140 Jun  4 14:30 log.45006595._040558.job.log.1
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc       357 Jun  4 14:30 output.list
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:30 runtime_log
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc   1648640 Jun  4 14:30 result.tar.gz
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc      8659 Jun  4 14:30 runtime_log.err
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc       657 Jun  4 14:30 DadMDmTZkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmNlKDm6uiXym.diag
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:31 boinc_mmap_file
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc        28 Jun  4 14:31 wrapper_checkpoint.txt
[2025-06-04 14:31:37] -rw-r--r--. 1 boinc boinc     20593 Jun  4 14:31 stderr.txt
[2025-06-04 14:31:37] HITS file was successfully produced:
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc 177719394 Jun  4 14:27 shared/HITS.pool.root.1
[2025-06-04 14:31:37]  *** Contents of shared directory: ***
[2025-06-04 14:31:37] total 385584
[2025-06-04 14:31:37] -rw-r--r--. 2 boinc boinc 214936329 Jun  4 09:54 ATLAS.root_0
[2025-06-04 14:31:37] -rw-r--r--. 2 boinc boinc     15093 Jun  4 09:54 start_atlas.sh
[2025-06-04 14:31:37] -rw-r--r--. 2 boinc boinc    508877 Jun  4 09:54 input.tar.gz
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc 177719394 Jun  4 14:27 HITS.pool.root.1
[2025-06-04 14:31:37] -rw-------. 1 boinc boinc   1648640 Jun  4 14:30 result.tar.gz
14:31:39 (1784): run_atlas exited; CPU time 50714.968692
14:31:39 (1784): called boinc_finish(0)

</stderr_txt>
]]>

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