Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:59:49 (2842636): wrapper (7.7.26015): starting
07:59:49 (2842636): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 07:59:49] Arguments: --nthreads 3
[2025-06-04 07:59:49] Threads: 3
[2025-06-04 07:59:49] Checking for CVMFS
[2025-06-04 07:59:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:59:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:59:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:59:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:59:49] 2.9.2.0 2190426 2235 66584 146769 3 56 32051762 36864000 0 130560 0 1744634 99.992 524381 31216 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 07:59:49] CVMFS is ok
[2025-06-04 07:59:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 07:59:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 07:59:49] Further information can be found at the LHC@home message board.
[2025-06-04 07:59:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:59:49] Checking for apptainer binary...
[2025-06-04 07:59:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:59:49] Running /usr/bin/apptainer --version
[2025-06-04 07:59:49] apptainer version 1.3.6-6.1
[2025-06-04 07:59:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:59:50] thA312
[2025-06-04 07:59:50] apptainer works
[2025-06-04 07:59:50] Set ATHENA_PROC_NUMBER=3
[2025-06-04 07:59:50] Set ATHENA_CORE_NUMBER=3
[2025-06-04 07:59:50] Starting ATLAS job with PandaID=6677862566
[2025-06-04 07:59:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:21:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:21:36]  guid=bf3b8698-b003-4f78-99bb-0cd93a5418b6
[2025-06-04 09:21:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 09:21:36]  is_altstaged=None
[2025-06-04 09:21:36]  is_tar=False
[2025-06-04 09:21:36]  lfn=log.45006595._040556.job.log.tgz.1
[2025-06-04 09:21:36]  mtime=0
[2025-06-04 09:21:36]  protocol_id=None
[2025-06-04 09:21:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 09:21:36]  replicas=None
[2025-06-04 09:21:36]  scope=mc23_13p6TeV
[2025-06-04 09:21:36]  status=None
[2025-06-04 09:21:36]  status_code=0
[2025-06-04 09:21:36]  storage_token=
[2025-06-04 09:21:36]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677862566/log.45006595._040556.job.log.tgz.1
[2025-06-04 09:21:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/ec/log.45006595._040556.job.log.tgz.1
[2025-06-04 09:21:36]  workdir=None
[2025-06-04 09:21:36] ]
[2025-06-04 09:21:36] 2025-06-04 07:21:08,364 | INFO     | transferring file log.45006595._040556.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677862566/log.45006595._040556.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 09:21:36] 2025-06-04 07:21:08,364 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677862566/log.45006595._040556.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0405
[2025-06-04 09:21:36] 2025-06-04 07:21:08,376 | INFO     | adding to output.list: log.45006595._040556.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/ec/log.45006595._040556.job.log.tg
[2025-06-04 09:21:36] 2025-06-04 07:21:08,376 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 09:21:36] 2025-06-04 07:21:08,376 | INFO     | summary of transferred files:
[2025-06-04 09:21:36] 2025-06-04 07:21:08,377 | INFO     |  -- lfn=log.45006595._040556.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 09:21:36] 2025-06-04 07:21:08,377 | INFO     | stage-out finished correctly
[2025-06-04 09:21:36] 2025-06-04 07:21:09,130 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 09:21:36] 2025-06-04 07:21:09,164 | INFO     | job 6677862566 has state=finished
[2025-06-04 09:21:36] 2025-06-04 07:21:09,164 | INFO     | preparing for final server update for job 6677862566 in state='finished'
[2025-06-04 09:21:36] 2025-06-04 07:21:09,164 | INFO     | this job has now completed (state=finished)
[2025-06-04 09:21:36] 2025-06-04 07:21:09,164 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 09:21:36] 2025-06-04 07:21:09,164 | INFO     | log transfer has been attempted: DONE
[2025-06-04 09:21:36] 2025-06-04 07:21:09,164 | INFO     | job 6677862566 has finished - writing final server update
[2025-06-04 09:21:36] 2025-06-04 07:21:09,164 | INFO     | total number of processed events: 400 (read)
[2025-06-04 09:21:36] 2025-06-04 07:21:09,165 | INFO     | executing command: lscpu
[2025-06-04 09:21:36] 2025-06-04 07:21:09,179 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 09:21:36] 2025-06-04 07:21:09,690 | INFO     | monitor loop #376: job 0:6677862566 is in state 'finished'
[2025-06-04 09:21:36] 2025-06-04 07:21:09,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:21:36] 2025-06-04 07:21:12,193 | INFO     | monitor loop #377: job 0:6677862566 is in state 'finished'
[2025-06-04 09:21:36] 2025-06-04 07:21:12,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:21:36] 2025-06-04 07:21:14,695 | INFO     | monitor loop #378: job 0:6677862566 is in state 'finished'
[2025-06-04 09:21:36] 2025-06-04 07:21:14,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 09:21:36] 2025-06-04 07:21:16,766 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 09:21:36] 2025-06-04 07:21:16,767 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677862566/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:21:36] 2025-06-04 07:21:16,767 | INFO     | extracted standard info from prmon json
[2025-06-04 09:21:36] 2025-06-04 07:21:16,767 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:21:36] 2025-06-04 07:21:16,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:21:36] 2025-06-04 07:21:16,767 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:21:36] 2025-06-04 07:21:16,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:21:36] 2025-06-04 07:21:16,768 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:21:36] 2025-06-04 07:21:16,768 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 09:21:36] 2025-06-04 07:21:16,768 | INFO     | sum of deviations: -3699924866.000001
[2025-06-04 09:21:36] 2025-06-04 07:21:16,768 | INFO     | mean x: 1749019325.0
[2025-06-04 09:21:36] 2025-06-04 07:21:16,768 | INFO     | mean y: 2372979.2191780824
[2025-06-04 09:21:36] 2025-06-04 07:21:16,768 | INFO     | -- intersect: 53658832508.642845
[2025-06-04 09:21:36] 2025-06-04 07:21:16,768 | INFO     | intersect: 53658832508.642845
[2025-06-04 09:21:36] 2025-06-04 07:21:16,768 | INFO     | chi2: 0.1155921864356929
[2025-06-04 09:21:36] 2025-06-04 07:21:16,768 | INFO     | -- intersect: 53658832508.642845
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | current memory leak: -30.68 B/s (using 73 data points, chi2=0.12)
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | ..............................
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | . Timing measurements:
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | . get job = 0 s
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | . initial setup = 1 s
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | . payload setup = 6 s
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | . stage-in = 0 s
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | . payload execution = 4842 s
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | . stage-out = 0 s
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | . log creation = 0 s
[2025-06-04 09:21:36] 2025-06-04 07:21:16,769 | INFO     | ..............................
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | 
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | job summary report
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | --------------------------------------------------
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | PanDA job id: 6677862566
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | task id: 45006595
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | errors: (none)
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | pilot state: finished 
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | transexitcode: 0
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | exeerrorcode: 0
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | exeerrordiag: 
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | exitcode: 0
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | exitmsg: OK
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | cpuconsumptiontime: 13903 s
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | nevents: 400
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | neventsw: 0
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | pid: 2852806
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | pgrp: 2852806
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | corecount: 3
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | event service: False
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | sizes: {0: 2405187, 5: 2405393, 11: 2405449, 4852: 2431645, 4853: 2431644, 4854: 2440647, 4855: 2440831, 4863: 2441001}
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | --------------------------------------------------
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | 
[2025-06-04 09:21:36] 2025-06-04 07:21:16,802 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 09:21:36] 2025-06-04 07:21:16,815 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,815 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | job 6677862566 has completed (purged errors)
[2025-06-04 09:21:36] 2025-06-04 07:21:16,816 | INFO     | overall cleanup function is called
[2025-06-04 09:21:36] 2025-06-04 07:21:17,822 | INFO     | --- collectZombieJob: --- 10, [2852806]
[2025-06-04 09:21:36] 2025-06-04 07:21:17,823 | INFO     | zombie collector waiting for pid 2852806
[2025-06-04 09:21:36] 2025-06-04 07:21:17,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:21:36] 2025-06-04 07:21:17,823 | INFO     | collected zombie processes
[2025-06-04 09:21:36] 2025-06-04 07:21:17,823 | INFO     | will attempt to kill all subprocesses of pid=2852806
[2025-06-04 09:21:36] 2025-06-04 07:21:17,868 | INFO     | process IDs to be killed: [2852806] (in reverse order)
[2025-06-04 09:21:36] 2025-06-04 07:21:17,896 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:21:36] 2025-06-04 07:21:17,896 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:21:36] 2025-06-04 07:21:17,898 | INFO     | did not find any defunct processes belonging to 2852806
[2025-06-04 09:21:36] 2025-06-04 07:21:17,899 | INFO     | did not find any defunct processes belonging to 2852806
[2025-06-04 09:21:36] 2025-06-04 07:21:17,899 | INFO     | ready for new job
[2025-06-04 09:21:36] 2025-06-04 07:21:17,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:21:36] 2025-06-04 07:21:17,899 | INFO     | **************************************
[2025-06-04 09:21:36] 2025-06-04 07:21:17,900 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:21:36] 2025-06-04 07:21:17,900 | INFO     | **************************************
[2025-06-04 09:21:36] 2025-06-04 07:21:17,900 | INFO     | 
[2025-06-04 09:21:36] 2025-06-04 07:21:17,900 | INFO     | architecture information:
[2025-06-04 09:21:36] 2025-06-04 07:21:17,900 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:21:36] 2025-06-04 07:21:17,909 | INFO     | cat /etc/os-release:
[2025-06-04 09:21:36] NAME="CentOS Linux"
[2025-06-04 09:21:36] VERSION="7 (Core)"
[2025-06-04 09:21:36] ID="centos"
[2025-06-04 09:21:36] ID_LIKE="rhel fedora"
[2025-06-04 09:21:36] VERSION_ID="7"
[2025-06-04 09:21:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:21:36] ANSI_COLOR="0;31"
[2025-06-04 09:21:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:21:36] HOME_URL="https://www.centos.org/"
[2025-06-04 09:21:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:21:36] 
[2025-06-04 09:21:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:21:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:21:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:21:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:21:36] 
[2025-06-04 09:21:36] 2025-06-04 07:21:17,910 | INFO     | **************************************
[2025-06-04 09:21:36] 2025-06-04 07:21:18,413 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 09:21:36] 2025-06-04 07:21:18,426 | INFO     | sufficient remaining disk space (824973459456 B)
[2025-06-04 09:21:36] 2025-06-04 07:21:18,427 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:21:36] 2025-06-04 07:21:18,427 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:21:36] 2025-06-04 07:21:18,427 | INFO     | update_server=False
[2025-06-04 09:21:36] 2025-06-04 07:21:18,427 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:21:36] 2025-06-04 07:21:18,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:21:36] 2025-06-04 07:21:18,427 | INFO     | aborting loop
[2025-06-04 09:21:36] 2025-06-04 07:21:18,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:21:36] 2025-06-04 07:21:18,559 | INFO     | all job control threads have been joined
[2025-06-04 09:21:36] 2025-06-04 07:21:18,900 | INFO     | all payload control threads have been joined
[2025-06-04 09:21:36] 2025-06-04 07:21:18,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:21:36] 2025-06-04 07:21:19,092 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:21:36] 2025-06-04 07:21:19,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:21:36] 2025-06-04 07:21:19,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:21:36] 2025-06-04 07:21:19,291 | INFO     | all data control threads have been joined
[2025-06-04 09:21:36] 2025-06-04 07:21:19,431 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:19,432 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:19,432 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:19,433 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:19,565 | INFO     | [job] control thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:19,585 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:19,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:21:36] 2025-06-04 07:21:19,906 | INFO     | [payload] control thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:20,004 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:20,297 | INFO     | [data] control thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:20,479 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:20,601 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:20,909 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:20,922 | INFO     | [job] validate thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:20,930 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:23,681 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:29,029 | INFO     | job.realtimelogging is not enabled
[2025-06-04 09:21:36] 2025-06-04 07:21:30,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:21:36] 2025-06-04 07:21:31,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692022478656)>', '<ExcThread(monitor, started 139691261163264)>']
[2025-06-04 09:21:36] 2025-06-04 07:21:32,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:21:36] 2025-06-04 07:21:32,162 | INFO     | [monitor] control thread has ended
[2025-06-04 09:21:36] 2025-06-04 07:21:36,721 | INFO     | all workflow threads have been joined
[2025-06-04 09:21:36] 2025-06-04 07:21:36,722 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:21:36] 2025-06-04 07:21:36,723 | INFO     | traces error code: 0
[2025-06-04 09:21:36] 2025-06-04 07:21:36,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:21:36] 2025-06-04 07:21:36,774 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:21:36] 2025-06-04 07:21:36,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:21:36] 2025-06-04 07:21:36,780 [wrapper] pilotpid: 2846284
[2025-06-04 09:21:36] 2025-06-04 07:21:36,783 [wrapper] Pilot exit status: 0
[2025-06-04 09:21:36] 2025-06-04 07:21:36,791 [wrapper] pandaids: 6677862566
[2025-06-04 09:21:36] 2025-06-04 07:21:36,809 [wrapper] cleanup supervisor_pilot 2865035 2846285
[2025-06-04 09:21:36] 2025-06-04 07:21:36,812 [wrapper] Test setup, not cleaning
[2025-06-04 09:21:36] 2025-06-04 07:21:36,814 [wrapper] apfmon messages muted
[2025-06-04 09:21:36] 2025-06-04 07:21:36,817 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:21:36] 2025-06-04 07:21:36,820 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:21:36]  *** Error codes and diagnostics ***
[2025-06-04 09:21:36]     "exeErrorCode": 0,
[2025-06-04 09:21:36]     "exeErrorDiag": "",
[2025-06-04 09:21:36]     "pilotErrorCode": 0,
[2025-06-04 09:21:36]     "pilotErrorDiag": "",
[2025-06-04 09:21:36]  *** Listing of results directory ***
[2025-06-04 09:21:36] total 384416
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:25 queuedata.json
[2025-06-04 09:21:36] -rwx------ 1 boinc boinc     37140 Jun  3 19:25 runpilot2-wrapper.sh
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc       100 Jun  4 07:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:21:36] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 07:59 run_atlas
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc       105 Jun  4 07:59 job.xml
[2025-06-04 09:21:36] -rw-r--r-- 2 boinc boinc 214936329 Jun  4 07:59 EVNT.45006593._001625.pool.root.1
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc      6679 Jun  4 07:59 init_data.xml
[2025-06-04 09:21:36] drwxrwx--x 2 boinc boinc      4096 Jun  4 07:59 shared
[2025-06-04 09:21:36] -rw-r--r-- 2 boinc boinc    508881 Jun  4 07:59 input.tar.gz
[2025-06-04 09:21:36] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:59 start_atlas.sh
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc         0 Jun  4 07:59 boinc_lockfile
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc      2525 Jun  4 07:59 pandaJob.out
[2025-06-04 09:21:36] -rw------- 1 boinc boinc    986745 Jun  4 07:59 agis_schedconf.cvmfs.json
[2025-06-04 09:21:36] -rw------- 1 boinc boinc   1603667 Jun  4 07:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:21:36] drwx------ 4 boinc boinc      4096 Jun  4 07:59 pilot3
[2025-06-04 09:21:36] -rw------- 1 boinc boinc        95 Jun  4 09:20 pilot_heartbeat.json
[2025-06-04 09:21:36] -rw------- 1 boinc boinc 173458718 Jun  4 09:20 HITS.45006595._040556.pool.root.1
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc       529 Jun  4 09:20 boinc_task_state.xml
[2025-06-04 09:21:36] -rw------- 1 boinc boinc      1019 Jun  4 09:21 memory_monitor_summary.json
[2025-06-04 09:21:36] -rw------- 1 boinc boinc    231778 Jun  4 09:21 log.45006595._040556.job.log.tgz.1
[2025-06-04 09:21:36] -rw------- 1 boinc boinc      7649 Jun  4 09:21 heartbeat.json
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc      8192 Jun  4 09:21 boinc_mmap_file
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc        27 Jun  4 09:21 wrapper_checkpoint.txt
[2025-06-04 09:21:36] -rw------- 1 boinc boinc      4429 Jun  4 09:21 pilotlog.txt
[2025-06-04 09:21:36] -rw------- 1 boinc boinc    473867 Jun  4 09:21 log.45006595._040556.job.log.1
[2025-06-04 09:21:36] -rw------- 1 boinc boinc       357 Jun  4 09:21 output.list
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc       620 Jun  4 09:21 runtime_log
[2025-06-04 09:21:36] -rw------- 1 boinc boinc    727040 Jun  4 09:21 result.tar.gz
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc      8733 Jun  4 09:21 runtime_log.err
[2025-06-04 09:21:36] -rw------- 1 boinc boinc       658 Jun  4 09:21 KZaMDmTZkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkNlKDmobFefm.diag
[2025-06-04 09:21:36] -rw-r--r-- 1 boinc boinc     21284 Jun  4 09:21 stderr.txt
[2025-06-04 09:21:36] HITS file was successfully produced:
[2025-06-04 09:21:36] -rw------- 1 boinc boinc 173458718 Jun  4 09:20 shared/HITS.pool.root.1
[2025-06-04 09:21:36]  *** Contents of shared directory: ***
[2025-06-04 09:21:36] total 380528
[2025-06-04 09:21:36] -rw-r--r-- 2 boinc boinc 214936329 Jun  4 07:59 ATLAS.root_0
[2025-06-04 09:21:36] -rw-r--r-- 2 boinc boinc    508881 Jun  4 07:59 input.tar.gz
[2025-06-04 09:21:36] -rw-r--r-- 2 boinc boinc     15093 Jun  4 07:59 start_atlas.sh
[2025-06-04 09:21:36] -rw------- 1 boinc boinc 173458718 Jun  4 09:20 HITS.pool.root.1
[2025-06-04 09:21:36] -rw------- 1 boinc boinc    727040 Jun  4 09:21 result.tar.gz
09:21:38 (2842636): run_atlas exited; CPU time 13930.536407
09:21:38 (2842636): called boinc_finish(0)

</stderr_txt>
]]>

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