Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:31:59 (1143): wrapper (7.7.26015): starting
07:31:59 (1143): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:31:59] Arguments: --nthreads 8
[2025-06-04 07:31:59] Threads: 8
[2025-06-04 07:31:59] Checking for CVMFS
[2025-06-04 07:32:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:32:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:32:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:32:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:32:01] 2.11.2.0 17186 32958 103044 146769 2 59 18436026 25165824 3522 130560 0 17621668 99.854 18920768 2063 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 07:32:01] CVMFS is ok
[2025-06-04 07:32:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:32:01] Checking for apptainer binary...
[2025-06-04 07:32:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:32:01] Running /usr/bin/apptainer --version
[2025-06-04 07:32:01] apptainer version 1.3.2-1.el7
[2025-06-04 07:32:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:35:35] cg-vwn311.simple-grid.lan
[2025-06-04 07:35:35] apptainer works
[2025-06-04 07:35:35] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:35:35] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:35:35] Starting ATLAS job with PandaID=6677862149
[2025-06-04 07:35:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:38:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:38:30] 2025-06-04 09:34:14,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:38:30] 2025-06-04 09:34:14,658 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:38:30] 2025-06-04 09:34:14,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:38:30] 2025-06-04 09:34:14,667 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:38:30] 2025-06-04 09:34:14,667 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 11:38:30] 2025-06-04 09:34:14,669 | INFO     | sum of deviations: 80211544167.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,669 | INFO     | mean x: 1749022799.5
[2025-06-04 11:38:30] 2025-06-04 09:34:14,670 | INFO     | mean y: 2423783.3153153155
[2025-06-04 11:38:30] 2025-06-04 09:34:14,670 | INFO     | -- intersect: -41350270691.13892
[2025-06-04 11:38:30] 2025-06-04 09:34:14,671 | INFO     | intersect: -41350270691.13892
[2025-06-04 11:38:30] 2025-06-04 09:34:14,671 | INFO     | chi2: 6.416207271025366
[2025-06-04 11:38:30] 2025-06-04 09:34:14,672 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,676 | INFO     | sum of deviations: 92746736300.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,676 | INFO     | mean x: 1749022647.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,676 | INFO     | mean y: 2432131.0967741935
[2025-06-04 11:38:30] 2025-06-04 09:34:14,676 | INFO     | -- intersect: -51194703798.051346
[2025-06-04 11:38:30] 2025-06-04 09:34:14,677 | INFO     | intersect: -51194703798.051346
[2025-06-04 11:38:30] 2025-06-04 09:34:14,677 | INFO     | chi2: 5.705945120790591
[2025-06-04 11:38:30] 2025-06-04 09:34:14,677 | INFO     | current chi2=5.705945120790591 (change=11.069813056729211 %)
[2025-06-04 11:38:30] 2025-06-04 09:34:14,677 | INFO     | right removable region: 216
[2025-06-04 11:38:30] 2025-06-04 09:34:14,678 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,680 | INFO     | sum of deviations: 4762453915.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,681 | INFO     | mean x: 1749022952.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,681 | INFO     | mean y: 2475073.723502304
[2025-06-04 11:38:30] 2025-06-04 09:34:14,681 | INFO     | -- intersect: -2626448085.067422
[2025-06-04 11:38:30] 2025-06-04 09:34:14,681 | INFO     | intersect: -2626448085.067422
[2025-06-04 11:38:30] 2025-06-04 09:34:14,681 | INFO     | chi2: 1.7419557026254051
[2025-06-04 11:38:30] 2025-06-04 09:34:14,682 | INFO     | current chi2=1.7419557026254051 (change=72.85069466985867 %)
[2025-06-04 11:38:30] 2025-06-04 09:34:14,682 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,687 | INFO     | sum of deviations: -22433388151.5
[2025-06-04 11:38:30] 2025-06-04 09:34:14,687 | INFO     | mean x: 1749023104.5
[2025-06-04 11:38:30] 2025-06-04 09:34:14,688 | INFO     | mean y: 2494283.9481132077
[2025-06-04 11:38:30] 2025-06-04 09:34:14,688 | INFO     | -- intersect: 13282983503.380318
[2025-06-04 11:38:30] 2025-06-04 09:34:14,688 | INFO     | intersect: 13282983503.380318
[2025-06-04 11:38:30] 2025-06-04 09:34:14,688 | INFO     | chi2: 0.8914943558972258
[2025-06-04 11:38:30] 2025-06-04 09:34:14,688 | INFO     | current chi2=0.8914943558972258 (change=48.82221433337245 %)
[2025-06-04 11:38:30] 2025-06-04 09:34:14,689 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,690 | INFO     | sum of deviations: -17487606392.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,691 | INFO     | mean x: 1749023257.0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,691 | INFO     | mean y: 2490559.7004830916
[2025-06-04 11:38:30] 2025-06-04 09:34:14,696 | INFO     | -- intersect: 11123561966.949993
[2025-06-04 11:38:30] 2025-06-04 09:34:14,696 | INFO     | intersect: 11123561966.949993
[2025-06-04 11:38:30] 2025-06-04 09:34:14,697 | INFO     | chi2: 0.868452183018925
[2025-06-04 11:38:30] 2025-06-04 09:34:14,697 | INFO     | current chi2=0.868452183018925 (change=2.584668397043353 %)
[2025-06-04 11:38:30] 2025-06-04 09:34:14,697 | INFO     | left removable region: 30
[2025-06-04 11:38:30] 2025-06-04 09:34:14,698 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 11:38:30] 2025-06-04 09:34:14,699 | INFO     | sum of deviations: 6677347889.5
[2025-06-04 11:38:30] 2025-06-04 09:34:14,699 | INFO     | mean x: 1749023531.5
[2025-06-04 11:38:30] 2025-06-04 09:34:14,699 | INFO     | mean y: 2492488.940860215
[2025-06-04 11:38:30] 2025-06-04 09:34:14,699 | INFO     | -- intersect: -5850728927.344752
[2025-06-04 11:38:30] 2025-06-04 09:34:14,700 | INFO     | intersect: -5850728927.344752
[2025-06-04 11:38:30] 2025-06-04 09:34:14,700 | INFO     | chi2: 0.0005686900418653034
[2025-06-04 11:38:30] 2025-06-04 09:34:14,700 | INFO     | -- intersect: -5850728927.344752
[2025-06-04 11:38:30] 2025-06-04 09:34:14,700 | INFO     | current memory leak: 3.35 B/s (using 186 data points, chi2=0.00)
[2025-06-04 11:38:30] 2025-06-04 09:34:14,701 | INFO     | ..............................
[2025-06-04 11:38:30] 2025-06-04 09:34:14,701 | INFO     | . Timing measurements:
[2025-06-04 11:38:30] 2025-06-04 09:34:14,701 | INFO     | . get job = 0 s
[2025-06-04 11:38:30] 2025-06-04 09:34:14,702 | INFO     | . initial setup = 6 s
[2025-06-04 11:38:30] 2025-06-04 09:34:14,702 | INFO     | . payload setup = 186 s
[2025-06-04 11:38:30] 2025-06-04 09:34:14,702 | INFO     | . stage-in = 0 s
[2025-06-04 11:38:30] 2025-06-04 09:34:14,702 | INFO     | . payload execution = 13645 s
[2025-06-04 11:38:30] 2025-06-04 09:34:14,702 | INFO     | . stage-out = 3 s
[2025-06-04 11:38:30] 2025-06-04 09:34:14,702 | INFO     | . log creation = 1 s
[2025-06-04 11:38:30] 2025-06-04 09:34:14,702 | INFO     | ..............................
[2025-06-04 11:38:30] 2025-06-04 09:34:14,887 | INFO     | 
[2025-06-04 11:38:30] 2025-06-04 09:34:14,887 | INFO     | job summary report
[2025-06-04 11:38:30] 2025-06-04 09:34:14,887 | INFO     | --------------------------------------------------
[2025-06-04 11:38:30] 2025-06-04 09:34:14,888 | INFO     | PanDA job id: 6677862149
[2025-06-04 11:38:30] 2025-06-04 09:34:14,888 | INFO     | task id: 45006595
[2025-06-04 11:38:30] 2025-06-04 09:34:14,888 | INFO     | errors: (none)
[2025-06-04 11:38:30] 2025-06-04 09:34:14,888 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:38:30] 2025-06-04 09:34:14,888 | INFO     | pilot state: finished 
[2025-06-04 11:38:30] 2025-06-04 09:34:14,888 | INFO     | transexitcode: 0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,888 | INFO     | exeerrorcode: 0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,888 | INFO     | exeerrordiag: 
[2025-06-04 11:38:30] 2025-06-04 09:34:14,888 | INFO     | exitcode: 0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,889 | INFO     | exitmsg: OK
[2025-06-04 11:38:30] 2025-06-04 09:34:14,889 | INFO     | cpuconsumptiontime: 50793 s
[2025-06-04 11:38:30] 2025-06-04 09:34:14,889 | INFO     | nevents: 400
[2025-06-04 11:38:30] 2025-06-04 09:34:14,889 | INFO     | neventsw: 0
[2025-06-04 11:38:30] 2025-06-04 09:34:14,889 | INFO     | pid: 20752
[2025-06-04 11:38:30] 2025-06-04 09:34:14,889 | INFO     | pgrp: 20752
[2025-06-04 11:38:30] 2025-06-04 09:34:14,889 | INFO     | corecount: 8
[2025-06-04 11:38:30] 2025-06-04 09:34:14,889 | INFO     | event service: False
[2025-06-04 11:38:30] 2025-06-04 09:34:14,889 | INFO     | sizes: {0: 2405184, 1: 2405212, 12: 2405212, 22: 2405240, 33: 2405268, 44: 2405324, 55: 2405480, 66: 2405508, 76: 2405536, 87: 2405592, 88: 2405826, 98: 2406134, 1
[2025-06-04 11:38:30] 2025-06-04 09:34:14,890 | INFO     | --------------------------------------------------
[2025-06-04 11:38:30] 2025-06-04 09:34:14,890 | INFO     | 
[2025-06-04 11:38:30] 2025-06-04 09:34:14,890 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-04 11:38:30] 2025-06-04 09:34:14,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,938 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,939 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:38:30] 2025-06-04 09:34:14,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,939 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:38:30] 2025-06-04 09:34:14,939 | INFO     | job 6677862149 has completed (purged errors)
[2025-06-04 11:38:30] 2025-06-04 09:34:14,939 | INFO     | overall cleanup function is called
[2025-06-04 11:38:30] 2025-06-04 09:34:15,949 | INFO     | --- collectZombieJob: --- 10, [20752]
[2025-06-04 11:38:30] 2025-06-04 09:34:15,949 | INFO     | zombie collector waiting for pid 20752
[2025-06-04 11:38:30] 2025-06-04 09:34:15,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:38:30] 2025-06-04 09:34:15,950 | INFO     | collected zombie processes
[2025-06-04 11:38:30] 2025-06-04 09:34:15,950 | INFO     | will attempt to kill all subprocesses of pid=20752
[2025-06-04 11:38:30] 2025-06-04 09:34:16,074 | INFO     | process IDs to be killed: [20752] (in reverse order)
[2025-06-04 11:38:30] 2025-06-04 09:34:16,219 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:38:30] 2025-06-04 09:34:16,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:38:30] 2025-06-04 09:34:16,223 | INFO     | did not find any defunct processes belonging to 20752
[2025-06-04 11:38:30] 2025-06-04 09:34:16,227 | INFO     | did not find any defunct processes belonging to 20752
[2025-06-04 11:38:30] 2025-06-04 09:34:16,227 | INFO     | ready for new job
[2025-06-04 11:38:30] 2025-06-04 09:34:16,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:38:30] 2025-06-04 09:34:16,229 | INFO     | **************************************
[2025-06-04 11:38:30] 2025-06-04 09:34:16,230 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:38:30] 2025-06-04 09:34:16,230 | INFO     | **************************************
[2025-06-04 11:38:30] 2025-06-04 09:34:16,230 | INFO     | 
[2025-06-04 11:38:30] 2025-06-04 09:34:16,231 | INFO     | pilot is running in a VM
[2025-06-04 11:38:30] 2025-06-04 09:34:16,231 | INFO     | architecture information:
[2025-06-04 11:38:30] 2025-06-04 09:34:16,238 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:38:30] 2025-06-04 09:34:16,411 | INFO     | cat /etc/os-release:
[2025-06-04 11:38:30] NAME="CentOS Linux"
[2025-06-04 11:38:30] VERSION="7 (Core)"
[2025-06-04 11:38:30] ID="centos"
[2025-06-04 11:38:30] ID_LIKE="rhel fedora"
[2025-06-04 11:38:30] VERSION_ID="7"
[2025-06-04 11:38:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:38:30] ANSI_COLOR="0;31"
[2025-06-04 11:38:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:38:30] HOME_URL="https://www.centos.org/"
[2025-06-04 11:38:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:38:30] 
[2025-06-04 11:38:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:38:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:38:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:38:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:38:30] 
[2025-06-04 11:38:30] 2025-06-04 09:34:16,412 | INFO     | **************************************
[2025-06-04 11:38:30] 2025-06-04 09:34:16,915 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-04 11:38:30] 2025-06-04 09:34:17,181 | INFO     | sufficient remaining disk space (496736665600 B)
[2025-06-04 11:38:30] 2025-06-04 09:34:17,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:38:30] 2025-06-04 09:34:17,181 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:38:30] 2025-06-04 09:34:17,181 | INFO     | update_server=False
[2025-06-04 11:38:30] 2025-06-04 09:34:17,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:38:30] 2025-06-04 09:34:17,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:38:30] 2025-06-04 09:34:17,182 | INFO     | aborting loop
[2025-06-04 11:38:30] 2025-06-04 09:34:17,271 | INFO     | all job control threads have been joined
[2025-06-04 11:38:30] 2025-06-04 09:34:17,430 | INFO     | all data control threads have been joined
[2025-06-04 11:38:30] 2025-06-04 09:34:17,446 | INFO     | PID=14114 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 11:38:30] 2025-06-04 09:34:17,446 | INFO     | .. there are 9 such processes running
[2025-06-04 11:38:30] 2025-06-04 09:34:17,447 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:38:30] 2025-06-04 09:34:17,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:38:30] 2025-06-04 09:34:17,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:38:30] 2025-06-04 09:34:17,598 | INFO     | all payload control threads have been joined
[2025-06-04 11:38:30] 2025-06-04 09:34:17,988 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:38:30] 2025-06-04 09:34:18,187 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:18,188 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:18,277 | INFO     | [job] control thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:18,436 | INFO     | [data] control thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:18,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:38:30] 2025-06-04 09:34:18,603 | INFO     | [payload] control thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:19,125 | INFO     | [job] validate thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:19,252 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:19,255 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:19,279 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:19,375 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:19,450 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:19,710 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:19,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:38:30] 2025-06-04 09:34:19,994 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:20,893 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:22,534 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:27,761 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:38:30] 2025-06-04 09:34:28,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:38:30] 2025-06-04 09:34:30,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139924181788480)>', '<ExcThread(monitor, started 139923441047296)>']
[2025-06-04 11:38:30] 2025-06-04 09:34:31,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:38:30] 2025-06-04 09:34:31,531 | INFO     | [monitor] control thread has ended
[2025-06-04 11:38:30] 2025-06-04 09:34:35,845 | INFO     | all workflow threads have been joined
[2025-06-04 11:38:30] 2025-06-04 09:34:35,845 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:38:30] 2025-06-04 09:34:35,846 | INFO     | traces error code: 0
[2025-06-04 11:38:30] 2025-06-04 09:34:35,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:38:30] 2025-06-04 09:34:36,089 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:38:30] 2025-06-04 09:34:36,097 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:38:30] 2025-06-04 09:34:36,105 [wrapper] pilotpid: 14114
[2025-06-04 11:38:30] 2025-06-04 09:34:36,110 [wrapper] Pilot exit status: 0
[2025-06-04 11:38:30] 2025-06-04 09:34:36,133 [wrapper] pandaids: 6677862149
[2025-06-04 11:38:30] 2025-06-04 09:34:36,175 [wrapper] cleanup supervisor_pilot 30926 14115
[2025-06-04 11:38:30] 2025-06-04 09:34:36,253 [wrapper] Test setup, not cleaning
[2025-06-04 11:38:30] 2025-06-04 09:34:36,341 [wrapper] apfmon messages muted
[2025-06-04 11:38:30] 2025-06-04 09:34:36,423 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:38:30] 2025-06-04 09:34:36,519 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:38:30]  *** Error codes and diagnostics ***
[2025-06-04 11:38:30]     "exeErrorCode": 0,
[2025-06-04 11:38:30]     "exeErrorDiag": "",
[2025-06-04 11:38:30]     "pilotErrorCode": 0,
[2025-06-04 11:38:30]     "pilotErrorDiag": "",
[2025-06-04 11:38:30]  *** Listing of results directory ***
[2025-06-04 11:38:30] total 393276
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 11:38:30] -rwx------. 1 boinc boinc     37140 Jun  3 19:22 runpilot2-wrapper.sh
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:22 queuedata.json
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc       100 Jun  4 07:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:38:30] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 07:31 run_atlas
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc       105 Jun  4 07:31 job.xml
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc      6390 Jun  4 07:31 init_data.xml
[2025-06-04 11:38:30] -rw-r--r--. 2 boinc boinc 215479144 Jun  4 07:31 EVNT.45006593._001614.pool.root.1
[2025-06-04 11:38:30] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:31 start_atlas.sh
[2025-06-04 11:38:30] drwxrwx--x. 2 boinc boinc        68 Jun  4 07:31 shared
[2025-06-04 11:38:30] -rw-r--r--. 2 boinc boinc    508881 Jun  4 07:31 input.tar.gz
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc         0 Jun  4 07:31 boinc_lockfile
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc      2525 Jun  4 07:35 pandaJob.out
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc    986745 Jun  4 07:38 agis_schedconf.cvmfs.json
[2025-06-04 11:38:30] drwx------. 4 boinc boinc      4096 Jun  4 07:38 pilot3
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc 180236205 Jun  4 11:31 HITS.45006595._040285.pool.root.1
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc       531 Jun  4 11:31 boinc_task_state.xml
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc      1016 Jun  4 11:32 memory_monitor_summary.json
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc   1603667 Jun  4 11:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc    389160 Jun  4 11:32 log.45006595._040285.job.log.tgz.1
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc        95 Jun  4 11:34 pilot_heartbeat.json
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc      7692 Jun  4 11:34 heartbeat.json
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc      4880 Jun  4 11:34 pilotlog.txt
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc   1197870 Jun  4 11:34 log.45006595._040285.job.log.1
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc       357 Jun  4 11:34 output.list
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:34 runtime_log
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc   1607680 Jun  4 11:34 result.tar.gz
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc      8659 Jun  4 11:34 runtime_log.err
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc       656 Jun  4 11:34 8nJKDmNWkg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcQZKDmq3lPnn.diag
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc      8192 Jun  4 11:38 boinc_mmap_file
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc        28 Jun  4 11:38 wrapper_checkpoint.txt
[2025-06-04 11:38:30] -rw-r--r--. 1 boinc boinc     20557 Jun  4 11:38 stderr.txt
[2025-06-04 11:38:30] HITS file was successfully produced:
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc 180236205 Jun  4 11:31 shared/HITS.pool.root.1
[2025-06-04 11:38:30]  *** Contents of shared directory: ***
[2025-06-04 11:38:30] total 388532
[2025-06-04 11:38:30] -rw-r--r--. 2 boinc boinc 215479144 Jun  4 07:31 ATLAS.root_0
[2025-06-04 11:38:30] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:31 start_atlas.sh
[2025-06-04 11:38:30] -rw-r--r--. 2 boinc boinc    508881 Jun  4 07:31 input.tar.gz
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc 180236205 Jun  4 11:31 HITS.pool.root.1
[2025-06-04 11:38:30] -rw-------. 1 boinc boinc   1607680 Jun  4 11:34 result.tar.gz
11:38:32 (1143): run_atlas exited; CPU time 50986.675697
11:38:32 (1143): called boinc_finish(0)

</stderr_txt>
]]>

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