Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:10:35 (32139): wrapper (7.7.26015): starting
07:10:35 (32139): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:10:35] Arguments: --nthreads 8
[2025-06-04 07:10:35] Threads: 8
[2025-06-04 07:10:35] Checking for CVMFS
[2025-06-04 07:10:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:10:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:10:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:10:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:10:37] 2.11.2.0 16344 32770 89216 146768 0 59 18190654 25165825 4282 130560 0 16869986 99.779 19915266 2094 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 07:10:37] CVMFS is ok
[2025-06-04 07:10:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:10:37] Checking for apptainer binary...
[2025-06-04 07:10:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:10:37] Running /usr/bin/apptainer --version
[2025-06-04 07:10:37] apptainer version 1.3.2-1.el7
[2025-06-04 07:10:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:16:22] cg-vwn432.simple-grid.lan
[2025-06-04 07:16:22] apptainer works
[2025-06-04 07:16:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:16:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:16:23] Starting ATLAS job with PandaID=6677863904
[2025-06-04 07:16:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:10:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:10:28] 2025-06-04 09:09:55,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:10:28] 2025-06-04 09:09:55,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:10:28] 2025-06-04 09:09:55,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:10:28] 2025-06-04 09:09:55,433 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:10:28] 2025-06-04 09:09:55,434 | INFO     | sum of square deviations: 3168472492.9953957
[2025-06-04 11:10:28] 2025-06-04 09:09:55,436 | INFO     | sum of deviations: 59491397207.857155
[2025-06-04 11:10:28] 2025-06-04 09:09:55,436 | INFO     | mean x: 1749021470.0046084
[2025-06-04 11:10:28] 2025-06-04 09:09:55,436 | INFO     | mean y: 2437566.1428571427
[2025-06-04 11:10:28] 2025-06-04 09:09:55,436 | INFO     | -- intersect: -32837276594.905907
[2025-06-04 11:10:28] 2025-06-04 09:09:55,436 | INFO     | intersect: -32837276594.905907
[2025-06-04 11:10:28] 2025-06-04 09:09:55,437 | INFO     | chi2: 7.413605844229777
[2025-06-04 11:10:28] 2025-06-04 09:09:55,437 | INFO     | sum of square deviations: 2954459482.9952765
[2025-06-04 11:10:28] 2025-06-04 09:09:55,439 | INFO     | sum of deviations: 72416045435.5001
[2025-06-04 11:10:28] 2025-06-04 09:09:55,439 | INFO     | mean x: 1749021317.5047169
[2025-06-04 11:10:28] 2025-06-04 09:09:55,440 | INFO     | mean y: 2446585.5
[2025-06-04 11:10:28] 2025-06-04 09:09:55,440 | INFO     | -- intersect: -42867394048.65647
[2025-06-04 11:10:28] 2025-06-04 09:09:55,440 | INFO     | intersect: -42867394048.65647
[2025-06-04 11:10:28] 2025-06-04 09:09:55,440 | INFO     | chi2: 6.718639552425232
[2025-06-04 11:10:28] 2025-06-04 09:09:55,440 | INFO     | current chi2=6.718639552425232 (change=9.374200711593767 %)
[2025-06-04 11:10:28] 2025-06-04 09:09:55,441 | INFO     | right removable region: 211
[2025-06-04 11:10:28] 2025-06-04 09:09:55,441 | INFO     | sum of square deviations: 2954458872.9952765
[2025-06-04 11:10:28] 2025-06-04 09:09:55,443 | INFO     | sum of deviations: -16948724500.867935
[2025-06-04 11:10:28] 2025-06-04 09:09:55,443 | INFO     | mean x: 1749021622.5047169
[2025-06-04 11:10:28] 2025-06-04 09:09:55,443 | INFO     | mean y: 2491997.867924528
[2025-06-04 11:10:28] 2025-06-04 09:09:55,443 | INFO     | -- intersect: 10036033468.64164
[2025-06-04 11:10:28] 2025-06-04 09:09:55,443 | INFO     | intersect: 10036033468.64164
[2025-06-04 11:10:28] 2025-06-04 09:09:55,444 | INFO     | chi2: 2.3165569173561393
[2025-06-04 11:10:28] 2025-06-04 09:09:55,444 | INFO     | current chi2=2.3165569173561393 (change=68.75262907105883 %)
[2025-06-04 11:10:28] 2025-06-04 09:09:55,444 | INFO     | sum of square deviations: 2750305902.9951744
[2025-06-04 11:10:28] 2025-06-04 09:09:55,446 | INFO     | sum of deviations: -52133179964.18356
[2025-06-04 11:10:28] 2025-06-04 09:09:55,446 | INFO     | mean x: 1749021775.0048308
[2025-06-04 11:10:28] 2025-06-04 09:09:55,447 | INFO     | mean y: 2518097.183574879
[2025-06-04 11:10:28] 2025-06-04 09:09:55,447 | INFO     | -- intersect: 33155945451.683422
[2025-06-04 11:10:28] 2025-06-04 09:09:55,447 | INFO     | intersect: 33155945451.683422
[2025-06-04 11:10:28] 2025-06-04 09:09:55,447 | INFO     | chi2: 0.9939182666509929
[2025-06-04 11:10:28] 2025-06-04 09:09:55,447 | INFO     | current chi2=0.9939182666509929 (change=57.095020666043425 %)
[2025-06-04 11:10:28] 2025-06-04 09:09:55,448 | INFO     | sum of square deviations: 2555781020.4950557
[2025-06-04 11:10:28] 2025-06-04 09:09:55,450 | INFO     | sum of deviations: -51923774141.11881
[2025-06-04 11:10:28] 2025-06-04 09:09:55,450 | INFO     | mean x: 1749021927.5049505
[2025-06-04 11:10:28] 2025-06-04 09:09:55,450 | INFO     | mean y: 2517893.118811881
[2025-06-04 11:10:28] 2025-06-04 09:09:55,450 | INFO     | -- intersect: 35536007970.46522
[2025-06-04 11:10:28] 2025-06-04 09:09:55,450 | INFO     | intersect: 35536007970.46522
[2025-06-04 11:10:28] 2025-06-04 09:09:55,451 | INFO     | chi2: 0.9744552397067812
[2025-06-04 11:10:28] 2025-06-04 09:09:55,451 | INFO     | current chi2=0.9744552397067812 (change=1.9582120177539766 %)
[2025-06-04 11:10:28] 2025-06-04 09:09:55,451 | INFO     | left removable region: 30
[2025-06-04 11:10:28] 2025-06-04 09:09:55,451 | INFO     | sum of square deviations: 1838667490.9944742
[2025-06-04 11:10:28] 2025-06-04 09:09:55,453 | INFO     | sum of deviations: -17721575193.16023
[2025-06-04 11:10:28] 2025-06-04 09:09:55,453 | INFO     | mean x: 1749022202.0055249
[2025-06-04 11:10:28] 2025-06-04 09:09:55,453 | INFO     | mean y: 2511730.1602209946
[2025-06-04 11:10:28] 2025-06-04 09:09:55,453 | INFO     | -- intersect: 16860061351.91548
[2025-06-04 11:10:28] 2025-06-04 09:09:55,453 | INFO     | intersect: 16860061351.91548
[2025-06-04 11:10:28] 2025-06-04 09:09:55,454 | INFO     | chi2: 0.1298070804812699
[2025-06-04 11:10:28] 2025-06-04 09:09:55,454 | INFO     | -- intersect: 16860061351.91548
[2025-06-04 11:10:28] 2025-06-04 09:09:55,454 | INFO     | current memory leak: -9.64 B/s (using 181 data points, chi2=0.13)
[2025-06-04 11:10:28] 2025-06-04 09:09:55,455 | INFO     | ..............................
[2025-06-04 11:10:28] 2025-06-04 09:09:55,455 | INFO     | . Timing measurements:
[2025-06-04 11:10:28] 2025-06-04 09:09:55,456 | INFO     | . get job = 0 s
[2025-06-04 11:10:28] 2025-06-04 09:09:55,456 | INFO     | . initial setup = 6 s
[2025-06-04 11:10:28] 2025-06-04 09:09:55,456 | INFO     | . payload setup = 174 s
[2025-06-04 11:10:28] 2025-06-04 09:09:55,456 | INFO     | . stage-in = 0 s
[2025-06-04 11:10:28] 2025-06-04 09:09:55,456 | INFO     | . payload execution = 13354 s
[2025-06-04 11:10:28] 2025-06-04 09:09:55,456 | INFO     | . stage-out = 3 s
[2025-06-04 11:10:28] 2025-06-04 09:09:55,456 | INFO     | . log creation = 1 s
[2025-06-04 11:10:28] 2025-06-04 09:09:55,456 | INFO     | ..............................
[2025-06-04 11:10:28] 2025-06-04 09:09:55,608 | INFO     | 
[2025-06-04 11:10:28] 2025-06-04 09:09:55,609 | INFO     | job summary report
[2025-06-04 11:10:28] 2025-06-04 09:09:55,609 | INFO     | --------------------------------------------------
[2025-06-04 11:10:28] 2025-06-04 09:09:55,609 | INFO     | PanDA job id: 6677863904
[2025-06-04 11:10:28] 2025-06-04 09:09:55,609 | INFO     | task id: 45006595
[2025-06-04 11:10:28] 2025-06-04 09:09:55,609 | INFO     | errors: (none)
[2025-06-04 11:10:28] 2025-06-04 09:09:55,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:10:28] 2025-06-04 09:09:55,609 | INFO     | pilot state: finished 
[2025-06-04 11:10:28] 2025-06-04 09:09:55,609 | INFO     | transexitcode: 0
[2025-06-04 11:10:28] 2025-06-04 09:09:55,609 | INFO     | exeerrorcode: 0
[2025-06-04 11:10:28] 2025-06-04 09:09:55,609 | INFO     | exeerrordiag: 
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | exitcode: 0
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | exitmsg: OK
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | cpuconsumptiontime: 48893 s
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | nevents: 400
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | neventsw: 0
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | pid: 13283
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | pgrp: 13283
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | corecount: 8
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | event service: False
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | sizes: {0: 2404962, 1: 2405161, 12: 2405161, 23: 2405189, 33: 2405217, 44: 2405273, 55: 2405429, 66: 2405457, 77: 2405485, 85: 2405747, 87: 2405775, 13533: 2435606
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | --------------------------------------------------
[2025-06-04 11:10:28] 2025-06-04 09:09:55,610 | INFO     | 
[2025-06-04 11:10:28] 2025-06-04 09:09:55,611 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 11:10:28] 2025-06-04 09:09:55,678 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,678 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,678 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,679 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:10:28] 2025-06-04 09:09:55,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:10:28] 2025-06-04 09:09:55,680 | INFO     | job 6677863904 has completed (purged errors)
[2025-06-04 11:10:28] 2025-06-04 09:09:55,680 | INFO     | overall cleanup function is called
[2025-06-04 11:10:28] 2025-06-04 09:09:56,689 | INFO     | --- collectZombieJob: --- 10, [13283]
[2025-06-04 11:10:28] 2025-06-04 09:09:56,690 | INFO     | zombie collector waiting for pid 13283
[2025-06-04 11:10:28] 2025-06-04 09:09:56,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:10:28] 2025-06-04 09:09:56,690 | INFO     | collected zombie processes
[2025-06-04 11:10:28] 2025-06-04 09:09:56,690 | INFO     | will attempt to kill all subprocesses of pid=13283
[2025-06-04 11:10:28] 2025-06-04 09:09:56,803 | INFO     | process IDs to be killed: [13283] (in reverse order)
[2025-06-04 11:10:28] 2025-06-04 09:09:57,496 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:10:28] 2025-06-04 09:09:57,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:10:28] 2025-06-04 09:09:57,500 | INFO     | did not find any defunct processes belonging to 13283
[2025-06-04 11:10:28] 2025-06-04 09:09:57,504 | INFO     | did not find any defunct processes belonging to 13283
[2025-06-04 11:10:28] 2025-06-04 09:09:57,504 | INFO     | ready for new job
[2025-06-04 11:10:28] 2025-06-04 09:09:57,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:10:28] 2025-06-04 09:09:57,507 | INFO     | **************************************
[2025-06-04 11:10:28] 2025-06-04 09:09:57,507 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:10:28] 2025-06-04 09:09:57,507 | INFO     | **************************************
[2025-06-04 11:10:28] 2025-06-04 09:09:57,507 | INFO     | 
[2025-06-04 11:10:28] 2025-06-04 09:09:57,508 | INFO     | pilot is running in a VM
[2025-06-04 11:10:28] 2025-06-04 09:09:57,508 | INFO     | architecture information:
[2025-06-04 11:10:28] 2025-06-04 09:09:57,519 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:10:28] 2025-06-04 09:09:57,753 | INFO     | cat /etc/os-release:
[2025-06-04 11:10:28] NAME="CentOS Linux"
[2025-06-04 11:10:28] VERSION="7 (Core)"
[2025-06-04 11:10:28] ID="centos"
[2025-06-04 11:10:28] ID_LIKE="rhel fedora"
[2025-06-04 11:10:28] VERSION_ID="7"
[2025-06-04 11:10:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:10:28] ANSI_COLOR="0;31"
[2025-06-04 11:10:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:10:28] HOME_URL="https://www.centos.org/"
[2025-06-04 11:10:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:10:28] 
[2025-06-04 11:10:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:10:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:10:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:10:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:10:28] 
[2025-06-04 11:10:28] 2025-06-04 09:09:57,754 | INFO     | **************************************
[2025-06-04 11:10:28] 2025-06-04 09:09:58,258 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 11:10:28] 2025-06-04 09:09:58,549 | INFO     | sufficient remaining disk space (496546873344 B)
[2025-06-04 11:10:28] 2025-06-04 09:09:58,550 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:10:28] 2025-06-04 09:09:58,550 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:10:28] 2025-06-04 09:09:58,550 | INFO     | update_server=False
[2025-06-04 11:10:28] 2025-06-04 09:09:58,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:10:28] 2025-06-04 09:09:58,551 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:10:28] 2025-06-04 09:09:58,680 | INFO     | all payload control threads have been joined
[2025-06-04 11:10:28] 2025-06-04 09:09:58,723 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:10:28] 2025-06-04 09:09:58,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:10:28] 2025-06-04 09:09:58,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:10:28] 2025-06-04 09:09:58,756 | INFO     | all job control threads have been joined
[2025-06-04 11:10:28] 2025-06-04 09:09:58,951 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:10:28] 2025-06-04 09:09:58,952 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:10:28] 2025-06-04 09:09:58,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:10:28] 2025-06-04 09:09:58,952 | INFO     | will abort loop
[2025-06-04 11:10:28] 2025-06-04 09:09:59,308 | INFO     | all data control threads have been joined
[2025-06-04 11:10:28] 2025-06-04 09:09:59,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:10:28] 2025-06-04 09:09:59,556 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:09:59,686 | INFO     | [payload] control thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:09:59,748 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:09:59,762 | INFO     | [job] control thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:09:59,957 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:00,146 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:00,154 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:00,314 | INFO     | [data] control thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:00,537 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:00,558 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:00,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:10:28] 2025-06-04 09:10:00,655 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:00,664 | INFO     | [job] validate thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:00,687 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:01,628 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:03,550 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:09,594 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:10:28] 2025-06-04 09:10:10,599 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:10:28] 2025-06-04 09:10:10,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139965536134976)>', '<ExcThread(monitor, started 139964729784064)>']
[2025-06-04 11:10:28] 2025-06-04 09:10:10,794 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:10:28] 2025-06-04 09:10:10,795 | INFO     | [monitor] control thread has ended
[2025-06-04 11:10:28] 2025-06-04 09:10:15,730 | INFO     | all workflow threads have been joined
[2025-06-04 11:10:28] 2025-06-04 09:10:15,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:10:28] 2025-06-04 09:10:15,731 | INFO     | traces error code: 0
[2025-06-04 11:10:28] 2025-06-04 09:10:15,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:10:28] 2025-06-04 09:10:16,132 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:10:28] 2025-06-04 09:10:16,186 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:10:28] 2025-06-04 09:10:16,255 [wrapper] pilotpid: 4713
[2025-06-04 11:10:28] 2025-06-04 09:10:16,321 [wrapper] Pilot exit status: 0
[2025-06-04 11:10:28] 2025-06-04 09:10:16,809 [wrapper] pandaids: 6677863904
[2025-06-04 11:10:28] 2025-06-04 09:10:17,228 [wrapper] cleanup supervisor_pilot 10531 4714
[2025-06-04 11:10:28] 2025-06-04 09:10:17,269 [wrapper] Test setup, not cleaning
[2025-06-04 11:10:28] 2025-06-04 09:10:17,297 [wrapper] apfmon messages muted
[2025-06-04 11:10:28] 2025-06-04 09:10:17,382 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:10:28] 2025-06-04 09:10:17,485 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:10:28]  *** Error codes and diagnostics ***
[2025-06-04 11:10:28]     "exeErrorCode": 0,
[2025-06-04 11:10:28]     "exeErrorDiag": "",
[2025-06-04 11:10:28]     "pilotErrorCode": 0,
[2025-06-04 11:10:28]     "pilotErrorDiag": "",
[2025-06-04 11:10:28]  *** Listing of results directory ***
[2025-06-04 11:10:28] total 386704
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:31 queuedata.json
[2025-06-04 11:10:28] -rwx------. 1 boinc boinc     37140 Jun  3 19:32 runpilot2-wrapper.sh
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc       100 Jun  4 07:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:10:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 07:10 run_atlas
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc       105 Jun  4 07:10 job.xml
[2025-06-04 11:10:28] -rw-r--r--. 2 boinc boinc 214689243 Jun  4 07:10 EVNT.45006593._001632.pool.root.1
[2025-06-04 11:10:28] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:10 start_atlas.sh
[2025-06-04 11:10:28] drwxrwx--x. 2 boinc boinc        68 Jun  4 07:10 shared
[2025-06-04 11:10:28] -rw-r--r--. 2 boinc boinc    508887 Jun  4 07:10 input.tar.gz
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc      6391 Jun  4 07:10 init_data.xml
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc         0 Jun  4 07:10 boinc_lockfile
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc      2524 Jun  4 07:16 pandaJob.out
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc    986745 Jun  4 07:19 agis_schedconf.cvmfs.json
[2025-06-04 11:10:28] drwx------. 4 boinc boinc      4096 Jun  4 07:19 pilot3
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc 174356671 Jun  4 11:07 HITS.45006595._040731.pool.root.1
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc       531 Jun  4 11:07 boinc_task_state.xml
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc      1014 Jun  4 11:08 memory_monitor_summary.json
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc   1603667 Jun  4 11:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc    382420 Jun  4 11:08 log.45006595._040731.job.log.tgz.1
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc        95 Jun  4 11:09 pilot_heartbeat.json
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc      7687 Jun  4 11:09 heartbeat.json
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc      4674 Jun  4 11:10 pilotlog.txt
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc   1177866 Jun  4 11:10 log.45006595._040731.job.log.1
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc       357 Jun  4 11:10 output.list
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:10 runtime_log
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc   1576960 Jun  4 11:10 result.tar.gz
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc      8659 Jun  4 11:10 runtime_log.err
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc       657 Jun  4 11:10 cdGNDmBgkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIPlKDmJQn2Rn.diag
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc      8192 Jun  4 11:10 boinc_mmap_file
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc        28 Jun  4 11:10 wrapper_checkpoint.txt
[2025-06-04 11:10:28] -rw-r--r--. 1 boinc boinc     20551 Jun  4 11:10 stderr.txt
[2025-06-04 11:10:28] HITS file was successfully produced:
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc 174356671 Jun  4 11:07 shared/HITS.pool.root.1
[2025-06-04 11:10:28]  *** Contents of shared directory: ***
[2025-06-04 11:10:28] total 381988
[2025-06-04 11:10:28] -rw-r--r--. 2 boinc boinc 214689243 Jun  4 07:10 ATLAS.root_0
[2025-06-04 11:10:28] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:10 start_atlas.sh
[2025-06-04 11:10:28] -rw-r--r--. 2 boinc boinc    508887 Jun  4 07:10 input.tar.gz
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc 174356671 Jun  4 11:07 HITS.pool.root.1
[2025-06-04 11:10:28] -rw-------. 1 boinc boinc   1576960 Jun  4 11:10 result.tar.gz
11:10:30 (32139): run_atlas exited; CPU time 49094.835114
11:10:30 (32139): called boinc_finish(0)

</stderr_txt>
]]>

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