Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:57 (3214770): wrapper (7.7.26015): starting
09:35:57 (3214770): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 09:35:57] Arguments: --nthreads 4
[2025-06-05 09:35:57] Threads: 4
[2025-06-05 09:35:57] Checking for CVMFS
[2025-06-05 09:35:57] No cvmfs_config command found, will try listing directly
[2025-06-05 09:35:57] CVMFS is ok
[2025-06-05 09:35:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 09:35:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 09:35:57] Further information can be found at the LHC@home message board.
[2025-06-05 09:35:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:35:57] Checking for apptainer binary...
[2025-06-05 09:35:57] which: no apptainer in ((null))
[2025-06-05 09:35:57] apptainer is not installed, using version from CVMFS
[2025-06-05 09:35:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:35:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-05 09:35:57] apptainer works
[2025-06-05 09:35:57] Set ATHENA_PROC_NUMBER=4
[2025-06-05 09:35:57] Set ATHENA_CORE_NUMBER=4
[2025-06-05 09:35:57] Starting ATLAS job with PandaID=6677735618
[2025-06-05 09:35:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:55:16]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:55:16] 2025-06-05 09:54:48,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:55:16] 2025-06-05 09:54:50,179 | INFO     | PID=3218723 has CPU usage=23.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 11:55:16] 2025-06-05 09:54:50,179 | INFO     | .. there are 13 such processes running
[2025-06-05 11:55:16] 2025-06-05 09:54:50,802 | INFO     | monitor loop #578: job 0:6677735618 is in state 'finished'
[2025-06-05 11:55:16] 2025-06-05 09:54:50,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:55:16] 2025-06-05 09:54:53,010 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 11:55:16] 2025-06-05 09:54:53,010 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6677735618/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:55:16] 2025-06-05 09:54:53,011 | INFO     | extracted standard info from prmon json
[2025-06-05 11:55:16] 2025-06-05 09:54:53,011 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:55:16] 2025-06-05 09:54:53,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:55:16] 2025-06-05 09:54:53,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:55:16] 2025-06-05 09:54:53,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:55:16] 2025-06-05 09:54:53,015 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:55:16] 2025-06-05 09:54:53,015 | INFO     | sum of square deviations: 779958810.0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,016 | INFO     | sum of deviations: 13257571670.500002
[2025-06-05 11:55:16] 2025-06-05 09:54:53,016 | INFO     | mean x: 1749113122.5
[2025-06-05 11:55:16] 2025-06-05 09:54:53,016 | INFO     | mean y: 2307801.0661764704
[2025-06-05 11:55:16] 2025-06-05 09:54:53,016 | INFO     | -- intersect: -29728739895.357433
[2025-06-05 11:55:16] 2025-06-05 09:54:53,016 | INFO     | intersect: -29728739895.357433
[2025-06-05 11:55:16] 2025-06-05 09:54:53,016 | INFO     | chi2: 1.608934390634409
[2025-06-05 11:55:16] 2025-06-05 09:54:53,016 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,017 | INFO     | sum of deviations: 12792490316.000002
[2025-06-05 11:55:16] 2025-06-05 09:54:53,017 | INFO     | mean x: 1749112970.0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,017 | INFO     | mean y: 2306945.251908397
[2025-06-05 11:55:16] 2025-06-05 09:54:53,017 | INFO     | -- intersect: -32097761166.044575
[2025-06-05 11:55:16] 2025-06-05 09:54:53,017 | INFO     | intersect: -32097761166.044575
[2025-06-05 11:55:16] 2025-06-05 09:54:53,018 | INFO     | chi2: 1.611345879096288
[2025-06-05 11:55:16] 2025-06-05 09:54:53,018 | INFO     | current chi2=1.611345879096288 (change=-0.14988109371745412 %)
[2025-06-05 11:55:16] 2025-06-05 09:54:53,018 | INFO     | right removable region: 130
[2025-06-05 11:55:16] 2025-06-05 09:54:53,018 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,019 | INFO     | sum of deviations: -7176827022.0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,019 | INFO     | mean x: 1749113275.0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,019 | INFO     | mean y: 2344781.2061068704
[2025-06-05 11:55:16] 2025-06-05 09:54:53,019 | INFO     | -- intersect: 18011088247.892323
[2025-06-05 11:55:16] 2025-06-05 09:54:53,019 | INFO     | intersect: 18011088247.892323
[2025-06-05 11:55:16] 2025-06-05 09:54:53,019 | INFO     | chi2: 0.019780367518810852
[2025-06-05 11:55:16] 2025-06-05 09:54:53,019 | INFO     | current chi2=0.019780367518810852 (change=98.7705920369437 %)
[2025-06-05 11:55:16] 2025-06-05 09:54:53,020 | INFO     | sum of square deviations: 620244187.5
[2025-06-05 11:55:16] 2025-06-05 09:54:53,020 | INFO     | sum of deviations: -6517377250.0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,020 | INFO     | mean x: 1749113427.5
[2025-06-05 11:55:16] 2025-06-05 09:54:53,020 | INFO     | mean y: 2343462.492063492
[2025-06-05 11:55:16] 2025-06-05 09:54:53,021 | INFO     | -- intersect: 18381608096.968018
[2025-06-05 11:55:16] 2025-06-05 09:54:53,021 | INFO     | intersect: 18381608096.968018
[2025-06-05 11:55:16] 2025-06-05 09:54:53,021 | INFO     | chi2: 0.01961573112830277
[2025-06-05 11:55:16] 2025-06-05 09:54:53,021 | INFO     | current chi2=0.01961573112830277 (change=0.8323222020597775 %)
[2025-06-05 11:55:16] 2025-06-05 09:54:53,021 | INFO     | left removable region: 20
[2025-06-05 11:55:16] 2025-06-05 09:54:53,021 | INFO     | sum of square deviations: 412686807.5
[2025-06-05 11:55:16] 2025-06-05 09:54:53,022 | INFO     | sum of deviations: -4002902350.0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,022 | INFO     | mean x: 1749113549.5
[2025-06-05 11:55:16] 2025-06-05 09:54:53,022 | INFO     | mean y: 2338611.345454545
[2025-06-05 11:55:16] 2025-06-05 09:54:53,022 | INFO     | -- intersect: 16968063249.176023
[2025-06-05 11:55:16] 2025-06-05 09:54:53,022 | INFO     | intersect: 16968063249.176023
[2025-06-05 11:55:16] 2025-06-05 09:54:53,022 | INFO     | chi2: 0.01747136844011465
[2025-06-05 11:55:16] 2025-06-05 09:54:53,022 | INFO     | -- intersect: 16968063249.176023
[2025-06-05 11:55:16] 2025-06-05 09:54:53,023 | INFO     | current memory leak: -9.70 B/s (using 110 data points, chi2=0.02)
[2025-06-05 11:55:16] 2025-06-05 09:54:53,023 | INFO     | ..............................
[2025-06-05 11:55:16] 2025-06-05 09:54:53,023 | INFO     | . Timing measurements:
[2025-06-05 11:55:16] 2025-06-05 09:54:53,023 | INFO     | . get job = 0 s
[2025-06-05 11:55:16] 2025-06-05 09:54:53,023 | INFO     | . initial setup = 1 s
[2025-06-05 11:55:16] 2025-06-05 09:54:53,023 | INFO     | . payload setup = 9 s
[2025-06-05 11:55:16] 2025-06-05 09:54:53,023 | INFO     | . stage-in = 0 s
[2025-06-05 11:55:16] 2025-06-05 09:54:53,023 | INFO     | . payload execution = 8279 s
[2025-06-05 11:55:16] 2025-06-05 09:54:53,024 | INFO     | . stage-out = 0 s
[2025-06-05 11:55:16] 2025-06-05 09:54:53,024 | INFO     | . log creation = 0 s
[2025-06-05 11:55:16] 2025-06-05 09:54:53,024 | INFO     | ..............................
[2025-06-05 11:55:16] 2025-06-05 09:54:53,161 | INFO     | 
[2025-06-05 11:55:16] 2025-06-05 09:54:53,162 | INFO     | job summary report
[2025-06-05 11:55:16] 2025-06-05 09:54:53,162 | INFO     | --------------------------------------------------
[2025-06-05 11:55:16] 2025-06-05 09:54:53,162 | INFO     | PanDA job id: 6677735618
[2025-06-05 11:55:16] 2025-06-05 09:54:53,162 | INFO     | task id: 45006595
[2025-06-05 11:55:16] 2025-06-05 09:54:53,162 | INFO     | errors: (none)
[2025-06-05 11:55:16] 2025-06-05 09:54:53,162 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:55:16] 2025-06-05 09:54:53,162 | INFO     | pilot state: finished 
[2025-06-05 11:55:16] 2025-06-05 09:54:53,162 | INFO     | transexitcode: 0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,162 | INFO     | exeerrorcode: 0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | exeerrordiag: 
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | exitcode: 0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | exitmsg: OK
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | cpuconsumptiontime: 31412 s
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | nevents: 400
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | neventsw: 0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | pid: 3226241
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | pgrp: 3226241
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | corecount: 4
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | event service: False
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | sizes: {0: 2397353, 1: 2397381, 7: 2397587, 11: 2397615, 8293: 2425685, 8294: 2434648, 8296: 2434832, 8305: 2435002}
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | --------------------------------------------------
[2025-06-05 11:55:16] 2025-06-05 09:54:53,163 | INFO     | 
[2025-06-05 11:55:16] 2025-06-05 09:54:53,164 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2025-06-05 11:55:16] 2025-06-05 09:54:53,196 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,197 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,198 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:55:16] 2025-06-05 09:54:53,198 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,198 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:55:16] 2025-06-05 09:54:53,199 | INFO     | job 6677735618 has completed (purged errors)
[2025-06-05 11:55:16] 2025-06-05 09:54:53,199 | INFO     | overall cleanup function is called
[2025-06-05 11:55:16] 2025-06-05 09:54:54,208 | INFO     | --- collectZombieJob: --- 10, [3226241]
[2025-06-05 11:55:16] 2025-06-05 09:54:54,208 | INFO     | zombie collector waiting for pid 3226241
[2025-06-05 11:55:16] 2025-06-05 09:54:54,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:55:16] 2025-06-05 09:54:54,209 | INFO     | collected zombie processes
[2025-06-05 11:55:16] 2025-06-05 09:54:54,209 | INFO     | will attempt to kill all subprocesses of pid=3226241
[2025-06-05 11:55:16] 2025-06-05 09:54:54,889 | INFO     | process IDs to be killed: [3226241] (in reverse order)
[2025-06-05 11:55:16] 2025-06-05 09:54:55,129 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:55:16] 2025-06-05 09:54:55,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:55:16] 2025-06-05 09:54:55,157 | INFO     | did not find any defunct processes belonging to 3226241
[2025-06-05 11:55:16] 2025-06-05 09:54:55,184 | INFO     | did not find any defunct processes belonging to 3226241
[2025-06-05 11:55:16] 2025-06-05 09:54:55,184 | INFO     | ready for new job
[2025-06-05 11:55:16] 2025-06-05 09:54:55,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:55:16] 2025-06-05 09:54:55,187 | INFO     | **************************************
[2025-06-05 11:55:16] 2025-06-05 09:54:55,187 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:55:16] 2025-06-05 09:54:55,187 | INFO     | **************************************
[2025-06-05 11:55:16] 2025-06-05 09:54:55,187 | INFO     | 
[2025-06-05 11:55:16] 2025-06-05 09:54:55,195 | INFO     | architecture information:
[2025-06-05 11:55:16] 2025-06-05 09:54:55,196 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:55:16] 2025-06-05 09:54:55,221 | INFO     | cat /etc/os-release:
[2025-06-05 11:55:16] NAME="CentOS Linux"
[2025-06-05 11:55:16] VERSION="7 (Core)"
[2025-06-05 11:55:16] ID="centos"
[2025-06-05 11:55:16] ID_LIKE="rhel fedora"
[2025-06-05 11:55:16] VERSION_ID="7"
[2025-06-05 11:55:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:55:16] ANSI_COLOR="0;31"
[2025-06-05 11:55:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:55:16] HOME_URL="https://www.centos.org/"
[2025-06-05 11:55:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:55:16] 
[2025-06-05 11:55:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:55:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:55:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:55:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:55:16] 
[2025-06-05 11:55:16] 2025-06-05 09:54:55,221 | INFO     | **************************************
[2025-06-05 11:55:16] 2025-06-05 09:54:55,724 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2025-06-05 11:55:16] 2025-06-05 09:54:55,750 | INFO     | sufficient remaining disk space (3283703824384 B)
[2025-06-05 11:55:16] 2025-06-05 09:54:55,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:55:16] 2025-06-05 09:54:55,750 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:55:16] 2025-06-05 09:54:55,751 | INFO     | update_server=False
[2025-06-05 11:55:16] 2025-06-05 09:54:55,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:55:16] 2025-06-05 09:54:55,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:55:16] 2025-06-05 09:54:55,813 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 11:55:16] 2025-06-05 09:54:55,813 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 11:55:16] 2025-06-05 09:54:55,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:55:16] 2025-06-05 09:54:55,814 | INFO     | will abort loop
[2025-06-05 11:55:16] 2025-06-05 09:54:55,885 | INFO     | all job control threads have been joined
[2025-06-05 11:55:16] 2025-06-05 09:54:56,197 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:55:16] 2025-06-05 09:54:56,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:55:16] 2025-06-05 09:54:56,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:55:16] 2025-06-05 09:54:56,693 | INFO     | all data control threads have been joined
[2025-06-05 11:55:16] 2025-06-05 09:54:56,700 | INFO     | all payload control threads have been joined
[2025-06-05 11:55:16] 2025-06-05 09:54:56,756 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:56,819 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:56,890 | INFO     | [job] control thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:57,066 | INFO     | [job] validate thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:57,375 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:57,416 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:57,618 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:57,699 | INFO     | [data] control thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:57,705 | INFO     | [payload] control thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:57,757 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:58,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:55:16] 2025-06-05 09:54:58,169 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:58,214 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:58,248 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:54:58,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:55:16] 2025-06-05 09:54:59,144 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:55:02,843 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:55:06,705 | INFO     | job.realtimelogging is not enabled
[2025-06-05 11:55:16] 2025-06-05 09:55:07,710 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:55:16] 2025-06-05 09:55:08,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22949678532416)>', '<ExcThread(monitor, started 22949436286720)>']
[2025-06-05 11:55:16] 2025-06-05 09:55:08,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:55:16] 2025-06-05 09:55:08,251 | INFO     | [monitor] control thread has ended
[2025-06-05 11:55:16] 2025-06-05 09:55:13,132 | INFO     | all workflow threads have been joined
[2025-06-05 11:55:16] 2025-06-05 09:55:13,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:55:16] 2025-06-05 09:55:13,132 | INFO     | traces error code: 0
[2025-06-05 11:55:16] 2025-06-05 09:55:13,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:55:16] 2025-06-05 09:55:13,315 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:55:16] 2025-06-05 09:55:13,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:55:16] 2025-06-05 09:55:13,323 [wrapper] pilotpid: 3218723
[2025-06-05 11:55:16] 2025-06-05 09:55:13,326 [wrapper] Pilot exit status: 0
[2025-06-05 11:55:16] 2025-06-05 09:55:13,339 [wrapper] pandaids: 6677735618
[2025-06-05 11:55:16] 2025-06-05 09:55:13,492 [wrapper] cleanup supervisor_pilot 3760603 3218724
[2025-06-05 11:55:16] 2025-06-05 09:55:13,497 [wrapper] Test setup, not cleaning
[2025-06-05 11:55:16] 2025-06-05 09:55:13,501 [wrapper] apfmon messages muted
[2025-06-05 11:55:16] 2025-06-05 09:55:13,505 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:55:16] 2025-06-05 09:55:13,509 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:55:16]  *** Error codes and diagnostics ***
[2025-06-05 11:55:16]     "exeErrorCode": 0,
[2025-06-05 11:55:16]     "exeErrorDiag": "",
[2025-06-05 11:55:16]     "pilotErrorCode": 0,
[2025-06-05 11:55:16]     "pilotErrorDiag": "",
[2025-06-05 11:55:16]  *** Listing of results directory ***
[2025-06-05 11:55:16] total 393960
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:03 pilot3.tar.gz
[2025-06-05 11:55:16] -rwx------ 1 boinc boinc     37140 Jun  3 18:08 runpilot2-wrapper.sh
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc      5111 Jun  3 18:08 queuedata.json
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc       100 Jun  5 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:55:16] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 09:35 run_atlas
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc       105 Jun  5 09:35 job.xml
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc      6686 Jun  5 09:35 init_data.xml
[2025-06-05 11:55:16] -rw-r--r-- 2 boinc boinc 214903551 Jun  5 09:35 EVNT.45006593._001534.pool.root.1
[2025-06-05 11:55:16] -rw-r--r-- 2 boinc boinc     15093 Jun  5 09:35 start_atlas.sh
[2025-06-05 11:55:16] drwxrwx--x 2 boinc boinc      4096 Jun  5 09:35 shared
[2025-06-05 11:55:16] -rw-r--r-- 2 boinc boinc    508884 Jun  5 09:35 input.tar.gz
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc         0 Jun  5 09:35 boinc_lockfile
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc      2525 Jun  5 09:35 pandaJob.out
[2025-06-05 11:55:16] -rw------- 1 boinc boinc    983087 Jun  5 09:36 agis_schedconf.cvmfs.json
[2025-06-05 11:55:16] -rw------- 1 boinc boinc   1598969 Jun  5 09:36 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:55:16] drwx------ 4 boinc boinc      4096 Jun  5 09:36 pilot3
[2025-06-05 11:55:16] -rw------- 1 boinc boinc 182563095 Jun  5 11:54 HITS.45006595._038215.pool.root.1
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc       529 Jun  5 11:54 boinc_task_state.xml
[2025-06-05 11:55:16] -rw------- 1 boinc boinc      1028 Jun  5 11:54 memory_monitor_summary.json
[2025-06-05 11:55:16] -rw------- 1 boinc boinc    271364 Jun  5 11:54 log.45006595._038215.job.log.tgz.1
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc        27 Jun  5 11:54 wrapper_checkpoint.txt
[2025-06-05 11:55:16] -rw------- 1 boinc boinc        95 Jun  5 11:54 pilot_heartbeat.json
[2025-06-05 11:55:16] -rw------- 1 boinc boinc      7702 Jun  5 11:54 heartbeat.json
[2025-06-05 11:55:16] -rw------- 1 boinc boinc      4622 Jun  5 11:55 pilotlog.txt
[2025-06-05 11:55:16] -rw------- 1 boinc boinc    784191 Jun  5 11:55 log.45006595._038215.job.log.1
[2025-06-05 11:55:16] -rw------- 1 boinc boinc       357 Jun  5 11:55 output.list
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc       620 Jun  5 11:55 runtime_log
[2025-06-05 11:55:16] -rw------- 1 boinc boinc   1075200 Jun  5 11:55 result.tar.gz
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc      9025 Jun  5 11:55 runtime_log.err
[2025-06-05 11:55:16] -rw------- 1 boinc boinc       662 Jun  5 11:55 j51NDm9Mjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXCZKDmqiukLn.diag
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc      8192 Jun  5 11:55 boinc_mmap_file
[2025-06-05 11:55:16] -rw-r--r-- 1 boinc boinc     20899 Jun  5 11:55 stderr.txt
[2025-06-05 11:55:16] HITS file was successfully produced:
[2025-06-05 11:55:16] -rw------- 1 boinc boinc 182563095 Jun  5 11:54 shared/HITS.pool.root.1
[2025-06-05 11:55:16]  *** Contents of shared directory: ***
[2025-06-05 11:55:16] total 389732
[2025-06-05 11:55:16] -rw-r--r-- 2 boinc boinc 214903551 Jun  5 09:35 ATLAS.root_0
[2025-06-05 11:55:16] -rw-r--r-- 2 boinc boinc     15093 Jun  5 09:35 start_atlas.sh
[2025-06-05 11:55:16] -rw-r--r-- 2 boinc boinc    508884 Jun  5 09:35 input.tar.gz
[2025-06-05 11:55:16] -rw------- 1 boinc boinc 182563095 Jun  5 11:54 HITS.pool.root.1
[2025-06-05 11:55:16] -rw------- 1 boinc boinc   1075200 Jun  5 11:55 result.tar.gz
11:55:17 (3214770): run_atlas exited; CPU time 31882.922249
11:55:17 (3214770): called boinc_finish(0)

</stderr_txt>
]]>

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