Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:38:27 (14736): wrapper (7.7.26015): starting
06:38:27 (14736): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:38:27] Arguments: --nthreads 8
[2025-06-04 06:38:27] Threads: 8
[2025-06-04 06:38:27] Checking for CVMFS
[2025-06-04 06:38:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:38:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:38:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:38:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:38:29] 2.11.2.0 13026 32864 89748 146767 1 114 20222719 25165824 3228 130560 0 16987072 99.839 18813154 2765 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 06:38:29] CVMFS is ok
[2025-06-04 06:38:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:38:29] Checking for apptainer binary...
[2025-06-04 06:38:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:38:29] Running /usr/bin/apptainer --version
[2025-06-04 06:38:29] apptainer version 1.3.2-1.el7
[2025-06-04 06:38:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:38:30] cg-vwn329.simple-grid.lan
[2025-06-04 06:38:30] apptainer works
[2025-06-04 06:38:30] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:38:30] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:38:30] Starting ATLAS job with PandaID=6667033632
[2025-06-04 06:38:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:46:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:46:29] 2025-06-04 10:10:23,769 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:46:29] 2025-06-04 10:10:23,769 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:46:29] 2025-06-04 10:10:23,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:46:29] 2025-06-04 10:10:23,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:46:29] 2025-06-04 10:10:23,776 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:46:29] 2025-06-04 10:10:23,777 | INFO     | sum of square deviations: 10546523325.0
[2025-06-04 12:46:29] 2025-06-04 10:10:23,780 | INFO     | sum of deviations: 45135735886.5
[2025-06-04 12:46:29] 2025-06-04 10:10:23,781 | INFO     | mean x: 1749021842.5
[2025-06-04 12:46:29] 2025-06-04 10:10:23,781 | INFO     | mean y: 2479558.453703704
[2025-06-04 12:46:29] 2025-06-04 10:10:23,781 | INFO     | -- intersect: -7482772738.4495125
[2025-06-04 12:46:29] 2025-06-04 10:10:23,781 | INFO     | intersect: -7482772738.4495125
[2025-06-04 12:46:29] 2025-06-04 10:10:23,781 | INFO     | chi2: 2.4151051087435813
[2025-06-04 12:46:29] 2025-06-04 10:10:23,782 | INFO     | sum of square deviations: 10065751520.0
[2025-06-04 12:46:29] 2025-06-04 10:10:23,785 | INFO     | sum of deviations: 65762999437.999985
[2025-06-04 12:46:29] 2025-06-04 10:10:23,786 | INFO     | mean x: 1749021690.0
[2025-06-04 12:46:29] 2025-06-04 10:10:23,786 | INFO     | mean y: 2486016.131661442
[2025-06-04 12:46:29] 2025-06-04 10:10:23,786 | INFO     | -- intersect: -11424471244.633284
[2025-06-04 12:46:29] 2025-06-04 10:10:23,786 | INFO     | intersect: -11424471244.633284
[2025-06-04 12:46:29] 2025-06-04 10:10:23,786 | INFO     | chi2: 1.6423729161935468
[2025-06-04 12:46:29] 2025-06-04 10:10:23,786 | INFO     | current chi2=1.6423729161935468 (change=31.995799675652037 %)
[2025-06-04 12:46:29] 2025-06-04 10:10:23,787 | INFO     | sum of square deviations: 9599817202.5
[2025-06-04 12:46:29] 2025-06-04 10:10:23,790 | INFO     | sum of deviations: 64561516598.0
[2025-06-04 12:46:29] 2025-06-04 10:10:23,790 | INFO     | mean x: 1749021537.5
[2025-06-04 12:46:29] 2025-06-04 10:10:23,791 | INFO     | mean y: 2485622.821656051
[2025-06-04 12:46:29] 2025-06-04 10:10:23,791 | INFO     | -- intersect: -11760184503.246897
[2025-06-04 12:46:29] 2025-06-04 10:10:23,791 | INFO     | intersect: -11760184503.246897
[2025-06-04 12:46:29] 2025-06-04 10:10:23,791 | INFO     | chi2: 1.6426739608816647
[2025-06-04 12:46:29] 2025-06-04 10:10:23,791 | INFO     | current chi2=1.6426739608816647 (change=-0.01832986194242031 %)
[2025-06-04 12:46:29] 2025-06-04 10:10:23,791 | INFO     | right removable region: 313
[2025-06-04 12:46:29] 2025-06-04 10:10:23,792 | INFO     | sum of square deviations: 10065751520.0
[2025-06-04 12:46:29] 2025-06-04 10:10:23,795 | INFO     | sum of deviations: -11258401499.0
[2025-06-04 12:46:29] 2025-06-04 10:10:23,796 | INFO     | mean x: 1749021995.0
[2025-06-04 12:46:29] 2025-06-04 10:10:23,796 | INFO     | mean y: 2497341.6112852665
[2025-06-04 12:46:29] 2025-06-04 10:10:23,796 | INFO     | -- intersect: 1958753842.7942162
[2025-06-04 12:46:29] 2025-06-04 10:10:23,796 | INFO     | intersect: 1958753842.7942162
[2025-06-04 12:46:29] 2025-06-04 10:10:23,796 | INFO     | chi2: 0.8240889739174997
[2025-06-04 12:46:29] 2025-06-04 10:10:23,797 | INFO     | current chi2=0.8240889739174997 (change=65.87771807802525 %)
[2025-06-04 12:46:29] 2025-06-04 10:10:23,797 | INFO     | sum of square deviations: 9599817202.5
[2025-06-04 12:46:29] 2025-06-04 10:10:23,800 | INFO     | sum of deviations: -9815559653.999998
[2025-06-04 12:46:29] 2025-06-04 10:10:23,801 | INFO     | mean x: 1749022147.5
[2025-06-04 12:46:29] 2025-06-04 10:10:23,801 | INFO     | mean y: 2496852.3184713377
[2025-06-04 12:46:29] 2025-06-04 10:10:23,801 | INFO     | -- intersect: 1790825823.8829105
[2025-06-04 12:46:29] 2025-06-04 10:10:23,801 | INFO     | intersect: 1790825823.8829105
[2025-06-04 12:46:29] 2025-06-04 10:10:23,801 | INFO     | chi2: 0.8083691409458791
[2025-06-04 12:46:29] 2025-06-04 10:10:23,802 | INFO     | current chi2=0.8083691409458791 (change=1.9075407473167252 %)
[2025-06-04 12:46:29] 2025-06-04 10:10:23,802 | INFO     | left removable region: 20
[2025-06-04 12:46:29] 2025-06-04 10:10:23,802 | INFO     | sum of square deviations: 7799669962.0
[2025-06-04 12:46:29] 2025-06-04 10:10:23,805 | INFO     | sum of deviations: 10464130868.999996
[2025-06-04 12:46:29] 2025-06-04 10:10:23,805 | INFO     | mean x: 1749022117.0
[2025-06-04 12:46:29] 2025-06-04 10:10:23,805 | INFO     | mean y: 2503761.9897610922
[2025-06-04 12:46:29] 2025-06-04 10:10:23,805 | INFO     | -- intersect: -2344005310.09031
[2025-06-04 12:46:29] 2025-06-04 10:10:23,805 | INFO     | intersect: -2344005310.09031
[2025-06-04 12:46:29] 2025-06-04 10:10:23,806 | INFO     | chi2: 0.0024328142719103264
[2025-06-04 12:46:29] 2025-06-04 10:10:23,806 | INFO     | -- intersect: -2344005310.09031
[2025-06-04 12:46:29] 2025-06-04 10:10:23,806 | INFO     | current memory leak: 1.34 B/s (using 293 data points, chi2=0.00)
[2025-06-04 12:46:29] 2025-06-04 10:10:23,807 | INFO     | ..............................
[2025-06-04 12:46:29] 2025-06-04 10:10:23,807 | INFO     | . Timing measurements:
[2025-06-04 12:46:29] 2025-06-04 10:10:23,807 | INFO     | . get job = 0 s
[2025-06-04 12:46:29] 2025-06-04 10:10:23,807 | INFO     | . initial setup = 2 s
[2025-06-04 12:46:29] 2025-06-04 10:10:23,808 | INFO     | . payload setup = 14 s
[2025-06-04 12:46:29] 2025-06-04 10:10:23,808 | INFO     | . stage-in = 0 s
[2025-06-04 12:46:29] 2025-06-04 10:10:23,808 | INFO     | . payload execution = 19757 s
[2025-06-04 12:46:29] 2025-06-04 10:10:23,808 | INFO     | . stage-out = 3 s
[2025-06-04 12:46:29] 2025-06-04 10:10:23,808 | INFO     | . log creation = 0 s
[2025-06-04 12:46:29] 2025-06-04 10:10:23,808 | INFO     | ..............................
[2025-06-04 12:46:29] 2025-06-04 10:10:23,999 | INFO     | 
[2025-06-04 12:46:29] 2025-06-04 10:10:23,999 | INFO     | job summary report
[2025-06-04 12:46:29] 2025-06-04 10:10:23,999 | INFO     | --------------------------------------------------
[2025-06-04 12:46:29] 2025-06-04 10:10:23,999 | INFO     | PanDA job id: 6667033632
[2025-06-04 12:46:29] 2025-06-04 10:10:23,999 | INFO     | task id: 44871837
[2025-06-04 12:46:29] 2025-06-04 10:10:23,999 | INFO     | errors: (none)
[2025-06-04 12:46:29] 2025-06-04 10:10:23,999 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:46:29] 2025-06-04 10:10:24,000 | INFO     | pilot state: finished 
[2025-06-04 12:46:29] 2025-06-04 10:10:24,000 | INFO     | transexitcode: 0
[2025-06-04 12:46:29] 2025-06-04 10:10:24,000 | INFO     | exeerrorcode: 0
[2025-06-04 12:46:29] 2025-06-04 10:10:24,000 | INFO     | exeerrordiag: 
[2025-06-04 12:46:29] 2025-06-04 10:10:24,000 | INFO     | exitcode: 0
[2025-06-04 12:46:29] 2025-06-04 10:10:24,000 | INFO     | exitmsg: OK
[2025-06-04 12:46:29] 2025-06-04 10:10:24,000 | INFO     | cpuconsumptiontime: 74618 s
[2025-06-04 12:46:29] 2025-06-04 10:10:24,000 | INFO     | nevents: 400
[2025-06-04 12:46:29] 2025-06-04 10:10:24,000 | INFO     | neventsw: 0
[2025-06-04 12:46:29] 2025-06-04 10:10:24,001 | INFO     | pid: 27029
[2025-06-04 12:46:29] 2025-06-04 10:10:24,001 | INFO     | pgrp: 27029
[2025-06-04 12:46:29] 2025-06-04 10:10:24,001 | INFO     | corecount: 8
[2025-06-04 12:46:29] 2025-06-04 10:10:24,001 | INFO     | event service: False
[2025-06-04 12:46:29] 2025-06-04 10:10:24,001 | INFO     | sizes: {0: 2404406, 1: 2405262, 2: 2405262, 12: 2405524, 19775: 2437539, 19779: 2446480, 19782: 2446664, 19873: 2446834}
[2025-06-04 12:46:29] 2025-06-04 10:10:24,001 | INFO     | --------------------------------------------------
[2025-06-04 12:46:29] 2025-06-04 10:10:24,001 | INFO     | 
[2025-06-04 12:46:29] 2025-06-04 10:10:24,001 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 12:46:29] 2025-06-04 10:10:24,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,437 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,437 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,438 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,438 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,438 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:46:29] 2025-06-04 10:10:24,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,438 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:46:29] 2025-06-04 10:10:24,439 | INFO     | job 6667033632 has completed (purged errors)
[2025-06-04 12:46:29] 2025-06-04 10:10:24,439 | INFO     | overall cleanup function is called
[2025-06-04 12:46:29] 2025-06-04 10:10:25,448 | INFO     | --- collectZombieJob: --- 10, [27029]
[2025-06-04 12:46:29] 2025-06-04 10:10:25,448 | INFO     | zombie collector waiting for pid 27029
[2025-06-04 12:46:29] 2025-06-04 10:10:25,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:46:29] 2025-06-04 10:10:25,448 | INFO     | collected zombie processes
[2025-06-04 12:46:29] 2025-06-04 10:10:25,448 | INFO     | will attempt to kill all subprocesses of pid=27029
[2025-06-04 12:46:29] 2025-06-04 10:10:25,559 | INFO     | process IDs to be killed: [27029] (in reverse order)
[2025-06-04 12:46:29] 2025-06-04 10:10:26,406 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:46:29] 2025-06-04 10:10:26,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:46:29] 2025-06-04 10:10:26,410 | INFO     | did not find any defunct processes belonging to 27029
[2025-06-04 12:46:29] 2025-06-04 10:10:26,413 | INFO     | did not find any defunct processes belonging to 27029
[2025-06-04 12:46:29] 2025-06-04 10:10:26,414 | INFO     | ready for new job
[2025-06-04 12:46:29] 2025-06-04 10:10:26,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:46:29] 2025-06-04 10:10:26,416 | INFO     | **************************************
[2025-06-04 12:46:29] 2025-06-04 10:10:26,416 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:46:29] 2025-06-04 10:10:26,416 | INFO     | **************************************
[2025-06-04 12:46:29] 2025-06-04 10:10:26,417 | INFO     | 
[2025-06-04 12:46:29] 2025-06-04 10:10:26,417 | INFO     | pilot is running in a VM
[2025-06-04 12:46:29] 2025-06-04 10:10:26,417 | INFO     | architecture information:
[2025-06-04 12:46:29] 2025-06-04 10:10:26,430 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:46:29] 2025-06-04 10:10:26,739 | INFO     | cat /etc/os-release:
[2025-06-04 12:46:29] NAME="CentOS Linux"
[2025-06-04 12:46:29] VERSION="7 (Core)"
[2025-06-04 12:46:29] ID="centos"
[2025-06-04 12:46:29] ID_LIKE="rhel fedora"
[2025-06-04 12:46:29] VERSION_ID="7"
[2025-06-04 12:46:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:46:29] ANSI_COLOR="0;31"
[2025-06-04 12:46:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:46:29] HOME_URL="https://www.centos.org/"
[2025-06-04 12:46:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:46:29] 
[2025-06-04 12:46:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:46:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:46:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:46:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:46:29] 
[2025-06-04 12:46:29] 2025-06-04 10:10:26,739 | INFO     | **************************************
[2025-06-04 12:46:29] 2025-06-04 10:10:27,243 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 12:46:29] 2025-06-04 10:10:27,412 | INFO     | sufficient remaining disk space (497069064192 B)
[2025-06-04 12:46:29] 2025-06-04 10:10:27,413 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:46:29] 2025-06-04 10:10:27,413 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:46:29] 2025-06-04 10:10:27,413 | INFO     | update_server=False
[2025-06-04 12:46:29] 2025-06-04 10:10:27,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:46:29] 2025-06-04 10:10:27,491 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 12:46:29] 2025-06-04 10:10:27,491 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 12:46:29] 2025-06-04 10:10:27,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:46:29] 2025-06-04 10:10:27,491 | INFO     | will abort loop
[2025-06-04 12:46:29] 2025-06-04 10:10:27,809 | INFO     | all data control threads have been joined
[2025-06-04 12:46:29] 2025-06-04 10:10:27,915 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:46:29] 2025-06-04 10:10:27,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:46:29] 2025-06-04 10:10:27,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:46:29] 2025-06-04 10:10:28,289 | INFO     | all payload control threads have been joined
[2025-06-04 12:46:29] 2025-06-04 10:10:28,419 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:28,434 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:28,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:46:29] 2025-06-04 10:10:28,498 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:28,563 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:28,614 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:28,815 | INFO     | [data] control thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:28,931 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:29,012 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:46:29] 2025-06-04 10:10:29,024 | INFO     | all job control threads have been joined
[2025-06-04 12:46:29] 2025-06-04 10:10:29,141 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:29,146 | INFO     | [job] validate thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:29,295 | INFO     | [payload] control thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:29,797 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:29,874 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:29,898 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:46:29] 2025-06-04 10:10:30,018 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:30,030 | INFO     | [job] control thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:30,464 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:33,908 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:46:29] 2025-06-04 10:10:35,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675967387456)>', '<ExcThread(monitor, started 139675507332864)>']
[2025-06-04 12:46:29] 2025-06-04 10:10:35,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:46:29] 2025-06-04 10:10:35,964 | INFO     | [monitor] control thread has ended
[2025-06-04 12:46:29] 2025-06-04 10:10:40,390 | INFO     | all workflow threads have been joined
[2025-06-04 12:46:29] 2025-06-04 10:10:40,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:46:29] 2025-06-04 10:10:40,390 | INFO     | traces error code: 0
[2025-06-04 12:46:29] 2025-06-04 10:10:40,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:46:29] 2025-06-04 10:10:40,908 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:46:29] 2025-06-04 10:10:40,990 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:46:29] 2025-06-04 10:10:41,084 [wrapper] pilotpid: 18424
[2025-06-04 12:46:29] 2025-06-04 10:10:41,144 [wrapper] Pilot exit status: 0
[2025-06-04 12:46:29] 2025-06-04 10:10:41,495 [wrapper] pandaids: 6667033632
[2025-06-04 12:46:29] 2025-06-04 10:10:42,257 [wrapper] cleanup supervisor_pilot  8510 18425
[2025-06-04 12:46:29] 2025-06-04 10:10:42,360 [wrapper] Test setup, not cleaning
[2025-06-04 12:46:29] 2025-06-04 10:10:42,486 [wrapper] apfmon messages muted
[2025-06-04 12:46:29] 2025-06-04 10:10:42,598 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:46:29] 2025-06-04 10:10:42,694 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:46:29]  *** Error codes and diagnostics ***
[2025-06-04 12:46:29]     "exeErrorCode": 0,
[2025-06-04 12:46:29]     "exeErrorDiag": "",
[2025-06-04 12:46:29]     "pilotErrorCode": 0,
[2025-06-04 12:46:29]     "pilotErrorDiag": "",
[2025-06-04 12:46:29]  *** Listing of results directory ***
[2025-06-04 12:46:29] total 417736
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc    495897 May 27 14:18 pilot3.tar.gz
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc      5111 May 27 15:08 queuedata.json
[2025-06-04 12:46:29] -rwx------. 1 boinc boinc     37140 May 27 15:11 runpilot2-wrapper.sh
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc       100 Jun  4 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:46:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 06:38 run_atlas
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc       105 Jun  4 06:38 job.xml
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc      6391 Jun  4 06:38 init_data.xml
[2025-06-04 12:46:29] -rw-r--r--. 2 boinc boinc 220657538 Jun  4 06:38 EVNT.44871834._002668.pool.root.1
[2025-06-04 12:46:29] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:38 start_atlas.sh
[2025-06-04 12:46:29] drwxrwx--x. 2 boinc boinc        68 Jun  4 06:38 shared
[2025-06-04 12:46:29] -rw-r--r--. 2 boinc boinc    508879 Jun  4 06:38 input.tar.gz
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc         0 Jun  4 06:38 boinc_lockfile
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc      2559 Jun  4 06:38 pandaJob.out
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc    986077 Jun  4 06:38 agis_schedconf.cvmfs.json
[2025-06-04 12:46:29] drwx------. 4 boinc boinc      4096 Jun  4 06:38 pilot3
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc 198943175 Jun  4 12:07 HITS.44871837._067821.pool.root.1
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc       531 Jun  4 12:07 boinc_task_state.xml
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc      1018 Jun  4 12:08 memory_monitor_summary.json
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc   1603667 Jun  4 12:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc    451600 Jun  4 12:08 log.44871837._067821.job.log.tgz.1
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc        95 Jun  4 12:09 pilot_heartbeat.json
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc      7687 Jun  4 12:10 heartbeat.json
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc      4602 Jun  4 12:10 pilotlog.txt
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc   1716344 Jun  4 12:10 log.44871837._067821.job.log.1
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc       357 Jun  4 12:10 output.list
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc       620 Jun  4 12:10 runtime_log
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc   2191360 Jun  4 12:10 result.tar.gz
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc      8659 Jun  4 12:10 runtime_log.err
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc       658 Jun  4 12:10 rHeLDm3G9d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBVZKDmqeXWcm.diag
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:46 boinc_mmap_file
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:46 wrapper_checkpoint.txt
[2025-06-04 12:46:29] -rw-r--r--. 1 boinc boinc     20467 Jun  4 12:46 stderr.txt
[2025-06-04 12:46:29] HITS file was successfully produced:
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc 198943175 Jun  4 12:07 shared/HITS.pool.root.1
[2025-06-04 12:46:29]  *** Contents of shared directory: ***
[2025-06-04 12:46:29] total 412428
[2025-06-04 12:46:29] -rw-r--r--. 2 boinc boinc 220657538 Jun  4 06:38 ATLAS.root_0
[2025-06-04 12:46:29] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:38 start_atlas.sh
[2025-06-04 12:46:29] -rw-r--r--. 2 boinc boinc    508879 Jun  4 06:38 input.tar.gz
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc 198943175 Jun  4 12:07 HITS.pool.root.1
[2025-06-04 12:46:29] -rw-------. 1 boinc boinc   2191360 Jun  4 12:10 result.tar.gz
12:46:31 (14736): run_atlas exited; CPU time 74873.666766
12:46:31 (14736): called boinc_finish(0)

</stderr_txt>
]]>

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