Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:47:23 (2622132): wrapper (7.7.26015): starting
13:47:23 (2622132): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 13:47:23] Arguments: --nthreads 4
[2025-06-05 13:47:23] Threads: 4
[2025-06-05 13:47:23] Checking for CVMFS
[2025-06-05 13:47:23] No cvmfs_config command found, will try listing directly
[2025-06-05 13:47:23] CVMFS is ok
[2025-06-05 13:47:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:47:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:47:23] Further information can be found at the LHC@home message board.
[2025-06-05 13:47:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:47:23] Checking for apptainer binary...
[2025-06-05 13:47:23] which: no apptainer in ((null))
[2025-06-05 13:47:23] apptainer is not installed, using version from CVMFS
[2025-06-05 13:47:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:47:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-05 13:47:24] apptainer works
[2025-06-05 13:47:24] Set ATHENA_PROC_NUMBER=4
[2025-06-05 13:47:24] Set ATHENA_CORE_NUMBER=4
[2025-06-05 13:47:24] Starting ATLAS job with PandaID=6677786683
[2025-06-05 13:47:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:34:27]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:34:27] 2025-06-05 14:32:29,793 | INFO     | executing command: lscpu
[2025-06-05 16:34:27] 2025-06-05 14:32:29,857 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 16:34:27] 2025-06-05 14:32:32,141 | INFO     | monitor loop #723: job 0:6677786683 is in state 'finished'
[2025-06-05 16:34:27] 2025-06-05 14:32:32,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:34:27] 2025-06-05 14:32:32,235 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-06-05 16:34:27] 2025-06-05 14:32:34,644 | INFO     | monitor loop #724: job 0:6677786683 is in state 'finished'
[2025-06-05 16:34:27] 2025-06-05 14:32:34,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:34:27] 2025-06-05 14:32:36,236 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 16:34:27] 2025-06-05 14:32:36,237 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6677786683/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:34:27] 2025-06-05 14:32:36,237 | INFO     | extracted standard info from prmon json
[2025-06-05 16:34:27] 2025-06-05 14:32:36,237 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:34:27] 2025-06-05 14:32:36,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:34:27] 2025-06-05 14:32:36,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:34:27] 2025-06-05 14:32:36,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:34:27] 2025-06-05 14:32:36,242 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:34:27] 2025-06-05 14:32:36,242 | INFO     | sum of square deviations: 1318277740.5
[2025-06-05 16:34:27] 2025-06-05 14:32:36,243 | INFO     | sum of deviations: -10709309053.500004
[2025-06-05 16:34:27] 2025-06-05 14:32:36,243 | INFO     | mean x: 1749128993.5
[2025-06-05 16:34:27] 2025-06-05 14:32:36,243 | INFO     | mean y: 2352304.6481481483
[2025-06-05 16:34:27] 2025-06-05 14:32:36,243 | INFO     | -- intersect: 14211772967.947968
[2025-06-05 16:34:27] 2025-06-05 14:32:36,243 | INFO     | intersect: 14211772967.947968
[2025-06-05 16:34:27] 2025-06-05 14:32:36,244 | INFO     | chi2: 1.825667961657932
[2025-06-05 16:34:27] 2025-06-05 14:32:36,244 | INFO     | sum of square deviations: 1199940638.0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,245 | INFO     | sum of deviations: -10315112200.000004
[2025-06-05 16:34:27] 2025-06-05 14:32:36,245 | INFO     | mean x: 1749128841.0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,245 | INFO     | mean y: 2352813.2165605095
[2025-06-05 16:34:27] 2025-06-05 14:32:36,245 | INFO     | -- intersect: 15038480164.685564
[2025-06-05 16:34:27] 2025-06-05 14:32:36,245 | INFO     | intersect: 15038480164.685564
[2025-06-05 16:34:27] 2025-06-05 14:32:36,246 | INFO     | chi2: 1.8230028898525557
[2025-06-05 16:34:27] 2025-06-05 14:32:36,246 | INFO     | current chi2=1.8230028898525557 (change=0.1459779029564739 %)
[2025-06-05 16:34:27] 2025-06-05 14:32:36,246 | INFO     | right removable region: 156
[2025-06-05 16:34:27] 2025-06-05 14:32:36,246 | INFO     | sum of square deviations: 1199940638.0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,247 | INFO     | sum of deviations: -32816295660.000004
[2025-06-05 16:34:27] 2025-06-05 14:32:36,247 | INFO     | mean x: 1749129146.0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,247 | INFO     | mean y: 2380336.458598726
[2025-06-05 16:34:27] 2025-06-05 14:32:36,247 | INFO     | -- intersect: 47838029355.17223
[2025-06-05 16:34:27] 2025-06-05 14:32:36,247 | INFO     | intersect: 47838029355.17223
[2025-06-05 16:34:27] 2025-06-05 14:32:36,248 | INFO     | chi2: 0.30877377711506027
[2025-06-05 16:34:27] 2025-06-05 14:32:36,248 | INFO     | current chi2=0.30877377711506027 (change=83.08707916226697 %)
[2025-06-05 16:34:27] 2025-06-05 14:32:36,248 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,249 | INFO     | sum of deviations: -27460662800.000004
[2025-06-05 16:34:27] 2025-06-05 14:32:36,249 | INFO     | mean x: 1749129298.5
[2025-06-05 16:34:27] 2025-06-05 14:32:36,249 | INFO     | mean y: 2372944.986842105
[2025-06-05 16:34:27] 2025-06-05 14:32:36,249 | INFO     | -- intersect: 44112929731.27525
[2025-06-05 16:34:27] 2025-06-05 14:32:36,249 | INFO     | intersect: 44112929731.27525
[2025-06-05 16:34:27] 2025-06-05 14:32:36,250 | INFO     | chi2: 0.2977992664516939
[2025-06-05 16:34:27] 2025-06-05 14:32:36,250 | INFO     | current chi2=0.2977992664516939 (change=3.554223666887637 %)
[2025-06-05 16:34:27] 2025-06-05 14:32:36,250 | INFO     | left removable region: 20
[2025-06-05 16:34:27] 2025-06-05 14:32:36,250 | INFO     | sum of square deviations: 779958810.0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,251 | INFO     | sum of deviations: -11431655834.0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,251 | INFO     | mean x: 1749129420.5
[2025-06-05 16:34:27] 2025-06-05 14:32:36,251 | INFO     | mean y: 2349643.7647058824
[2025-06-05 16:34:27] 2025-06-05 14:32:36,251 | INFO     | -- intersect: 25638890045.53267
[2025-06-05 16:34:27] 2025-06-05 14:32:36,251 | INFO     | intersect: 25638890045.53267
[2025-06-05 16:34:27] 2025-06-05 14:32:36,252 | INFO     | chi2: 0.18679129318004983
[2025-06-05 16:34:27] 2025-06-05 14:32:36,252 | INFO     | -- intersect: 25638890045.53267
[2025-06-05 16:34:27] 2025-06-05 14:32:36,252 | INFO     | current memory leak: -14.66 B/s (using 136 data points, chi2=0.19)
[2025-06-05 16:34:27] 2025-06-05 14:32:36,252 | INFO     | ..............................
[2025-06-05 16:34:27] 2025-06-05 14:32:36,253 | INFO     | . Timing measurements:
[2025-06-05 16:34:27] 2025-06-05 14:32:36,253 | INFO     | . get job = 0 s
[2025-06-05 16:34:27] 2025-06-05 14:32:36,253 | INFO     | . initial setup = 1 s
[2025-06-05 16:34:27] 2025-06-05 14:32:36,253 | INFO     | . payload setup = 7 s
[2025-06-05 16:34:27] 2025-06-05 14:32:36,253 | INFO     | . stage-in = 0 s
[2025-06-05 16:34:27] 2025-06-05 14:32:36,253 | INFO     | . payload execution = 9863 s
[2025-06-05 16:34:27] 2025-06-05 14:32:36,253 | INFO     | . stage-out = 1 s
[2025-06-05 16:34:27] 2025-06-05 14:32:36,253 | INFO     | . log creation = 0 s
[2025-06-05 16:34:27] 2025-06-05 14:32:36,253 | INFO     | ..............................
[2025-06-05 16:34:27] 2025-06-05 14:32:36,356 | INFO     | 
[2025-06-05 16:34:27] 2025-06-05 14:32:36,356 | INFO     | job summary report
[2025-06-05 16:34:27] 2025-06-05 14:32:36,356 | INFO     | --------------------------------------------------
[2025-06-05 16:34:27] 2025-06-05 14:32:36,356 | INFO     | PanDA job id: 6677786683
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | task id: 45006595
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | errors: (none)
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | pilot state: finished 
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | transexitcode: 0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | exeerrorcode: 0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | exeerrordiag: 
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | exitcode: 0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | exitmsg: OK
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | cpuconsumptiontime: 37373 s
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | nevents: 400
[2025-06-05 16:34:27] 2025-06-05 14:32:36,357 | INFO     | neventsw: 0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,358 | INFO     | pid: 2632733
[2025-06-05 16:34:27] 2025-06-05 14:32:36,358 | INFO     | pgrp: 2632733
[2025-06-05 16:34:27] 2025-06-05 14:32:36,358 | INFO     | corecount: 4
[2025-06-05 16:34:27] 2025-06-05 14:32:36,358 | INFO     | event service: False
[2025-06-05 16:34:27] 2025-06-05 14:32:36,358 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 11: 2397643, 9875: 2426076, 9877: 2435039, 9878: 2435223, 9885: 2435393}
[2025-06-05 16:34:27] 2025-06-05 14:32:36,358 | INFO     | --------------------------------------------------
[2025-06-05 16:34:27] 2025-06-05 14:32:36,358 | INFO     | 
[2025-06-05 16:34:27] 2025-06-05 14:32:36,358 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-05 16:34:27] 2025-06-05 14:32:36,379 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,379 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,379 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,379 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,379 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,380 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:34:27] 2025-06-05 14:32:36,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,381 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:34:27] 2025-06-05 14:32:36,381 | INFO     | job 6677786683 has completed (purged errors)
[2025-06-05 16:34:27] 2025-06-05 14:32:36,381 | INFO     | overall cleanup function is called
[2025-06-05 16:34:27] 2025-06-05 14:32:37,388 | INFO     | --- collectZombieJob: --- 10, [2632733]
[2025-06-05 16:34:27] 2025-06-05 14:32:37,389 | INFO     | zombie collector waiting for pid 2632733
[2025-06-05 16:34:27] 2025-06-05 14:32:37,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:34:27] 2025-06-05 14:32:37,389 | INFO     | collected zombie processes
[2025-06-05 16:34:27] 2025-06-05 14:32:37,389 | INFO     | will attempt to kill all subprocesses of pid=2632733
[2025-06-05 16:34:27] 2025-06-05 14:32:37,736 | INFO     | process IDs to be killed: [2632733] (in reverse order)
[2025-06-05 16:34:27] 2025-06-05 14:32:37,838 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:34:27] 2025-06-05 14:32:37,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:34:27] 2025-06-05 14:32:37,850 | INFO     | did not find any defunct processes belonging to 2632733
[2025-06-05 16:34:27] 2025-06-05 14:32:37,861 | INFO     | did not find any defunct processes belonging to 2632733
[2025-06-05 16:34:27] 2025-06-05 14:32:37,861 | INFO     | ready for new job
[2025-06-05 16:34:27] 2025-06-05 14:32:37,862 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:34:27] 2025-06-05 14:32:37,863 | INFO     | **************************************
[2025-06-05 16:34:27] 2025-06-05 14:32:37,864 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:34:27] 2025-06-05 14:32:37,864 | INFO     | **************************************
[2025-06-05 16:34:27] 2025-06-05 14:32:37,864 | INFO     | 
[2025-06-05 16:34:27] 2025-06-05 14:32:37,868 | INFO     | architecture information:
[2025-06-05 16:34:27] 2025-06-05 14:32:37,868 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:34:27] 2025-06-05 14:32:37,883 | INFO     | cat /etc/os-release:
[2025-06-05 16:34:27] NAME="CentOS Linux"
[2025-06-05 16:34:27] VERSION="7 (Core)"
[2025-06-05 16:34:27] ID="centos"
[2025-06-05 16:34:27] ID_LIKE="rhel fedora"
[2025-06-05 16:34:27] VERSION_ID="7"
[2025-06-05 16:34:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:34:27] ANSI_COLOR="0;31"
[2025-06-05 16:34:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:34:27] HOME_URL="https://www.centos.org/"
[2025-06-05 16:34:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:34:27] 
[2025-06-05 16:34:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:34:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:34:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:34:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:34:27] 
[2025-06-05 16:34:27] 2025-06-05 14:32:37,883 | INFO     | **************************************
[2025-06-05 16:34:27] 2025-06-05 14:32:38,386 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-05 16:34:27] 2025-06-05 14:32:38,403 | INFO     | sufficient remaining disk space (673593688064 B)
[2025-06-05 16:34:27] 2025-06-05 14:32:38,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:34:27] 2025-06-05 14:32:38,404 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:34:27] 2025-06-05 14:32:38,404 | INFO     | update_server=False
[2025-06-05 16:34:27] 2025-06-05 14:32:38,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:34:27] 2025-06-05 14:32:38,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:34:27] 2025-06-05 14:32:38,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:34:27] 2025-06-05 14:32:38,405 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 16:34:27] 2025-06-05 14:32:38,405 | INFO     | aborting loop
[2025-06-05 16:34:27] 2025-06-05 14:32:38,406 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:34:27] 2025-06-05 14:32:38,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:34:27] 2025-06-05 14:32:38,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:34:27] 2025-06-05 14:32:38,716 | INFO     | all payload control threads have been joined
[2025-06-05 16:34:27] 2025-06-05 14:32:38,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:34:27] 2025-06-05 14:32:39,012 | INFO     | all data control threads have been joined
[2025-06-05 16:34:27] 2025-06-05 14:32:39,409 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:39,411 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:39,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:39,655 | INFO     | all job control threads have been joined
[2025-06-05 16:34:27] 2025-06-05 14:32:39,722 | INFO     | [payload] control thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:39,764 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:39,959 | INFO     | [job] validate thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:40,017 | INFO     | [data] control thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:40,065 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:40,206 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:40,352 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:40,410 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:40,531 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:40,656 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:40,660 | INFO     | [job] control thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:41,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:34:27] 2025-06-05 14:32:42,368 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:42,928 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:34:27] 2025-06-05 14:32:43,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22974555776832)>', '<ExcThread(monitor, started 22973845071616)>']
[2025-06-05 16:34:27] 2025-06-05 14:32:43,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:34:27] 2025-06-05 14:32:43,432 | INFO     | [monitor] control thread has ended
[2025-06-05 16:34:27] 2025-06-05 14:32:48,062 | INFO     | all workflow threads have been joined
[2025-06-05 16:34:27] 2025-06-05 14:32:48,063 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:34:27] 2025-06-05 14:32:48,063 | INFO     | traces error code: 0
[2025-06-05 16:34:27] 2025-06-05 14:32:48,063 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:34:27] 2025-06-05 14:32:48,209 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:34:27] 2025-06-05 14:32:48,212 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:34:27] 2025-06-05 14:32:48,215 [wrapper] pilotpid: 2625800
[2025-06-05 16:34:27] 2025-06-05 14:32:48,217 [wrapper] Pilot exit status: 0
[2025-06-05 16:34:27] 2025-06-05 14:32:48,227 [wrapper] pandaids: 6677786683
[2025-06-05 16:34:27] 2025-06-05 14:32:48,296 [wrapper] cleanup supervisor_pilot 2906235 2625801
[2025-06-05 16:34:27] 2025-06-05 14:32:48,299 [wrapper] Test setup, not cleaning
[2025-06-05 16:34:27] 2025-06-05 14:32:48,302 [wrapper] apfmon messages muted
[2025-06-05 16:34:27] 2025-06-05 14:32:48,305 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:34:27] 2025-06-05 14:32:48,307 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:34:27]  *** Error codes and diagnostics ***
[2025-06-05 16:34:27]     "exeErrorCode": 0,
[2025-06-05 16:34:27]     "exeErrorDiag": "",
[2025-06-05 16:34:27]     "pilotErrorCode": 0,
[2025-06-05 16:34:27]     "pilotErrorDiag": "",
[2025-06-05 16:34:27]  *** Listing of results directory ***
[2025-06-05 16:34:27] total 389336
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-05 16:34:27] -rwx------ 1 boinc boinc     37140 Jun  3 19:12 runpilot2-wrapper.sh
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:12 queuedata.json
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc       100 Jun  5 13:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:34:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 13:47 run_atlas
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc       105 Jun  5 13:47 job.xml
[2025-06-05 16:34:27] -rw-r--r-- 2 boinc boinc 215599809 Jun  5 13:47 EVNT.45006593._001604.pool.root.1
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc      6635 Jun  5 13:47 init_data.xml
[2025-06-05 16:34:27] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:47 start_atlas.sh
[2025-06-05 16:34:27] drwxrwx--x 2 boinc boinc      4096 Jun  5 13:47 shared
[2025-06-05 16:34:27] -rw-r--r-- 2 boinc boinc    508880 Jun  5 13:47 input.tar.gz
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc         0 Jun  5 13:47 boinc_lockfile
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc      2525 Jun  5 13:47 pandaJob.out
[2025-06-05 16:34:27] -rw------- 1 boinc boinc    982836 Jun  5 13:47 agis_schedconf.cvmfs.json
[2025-06-05 16:34:27] -rw------- 1 boinc boinc   1598969 Jun  5 13:47 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:34:27] drwx------ 4 boinc boinc      4096 Jun  5 13:47 pilot3
[2025-06-05 16:34:27] -rw------- 1 boinc boinc 176790107 Jun  5 16:31 HITS.45006595._040000.pool.root.1
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc       528 Jun  5 16:32 boinc_task_state.xml
[2025-06-05 16:34:27] -rw------- 1 boinc boinc        95 Jun  5 16:32 pilot_heartbeat.json
[2025-06-05 16:34:27] -rw------- 1 boinc boinc      1033 Jun  5 16:32 memory_monitor_summary.json
[2025-06-05 16:34:27] -rw------- 1 boinc boinc    298186 Jun  5 16:32 log.45006595._040000.job.log.tgz.1
[2025-06-05 16:34:27] -rw------- 1 boinc boinc      7720 Jun  5 16:32 heartbeat.json
[2025-06-05 16:34:27] -rw------- 1 boinc boinc      4486 Jun  5 16:32 pilotlog.txt
[2025-06-05 16:34:27] -rw------- 1 boinc boinc    935600 Jun  5 16:32 log.45006595._040000.job.log.1
[2025-06-05 16:34:27] -rw------- 1 boinc boinc       357 Jun  5 16:32 output.list
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc       620 Jun  5 16:32 runtime_log
[2025-06-05 16:34:27] -rw------- 1 boinc boinc   1249280 Jun  5 16:32 result.tar.gz
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc      9025 Jun  5 16:32 runtime_log.err
[2025-06-05 16:34:27] -rw------- 1 boinc boinc       663 Jun  5 16:32 XCOODmGNkg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpOZKDmRcrE4m.diag
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc        26 Jun  5 16:34 wrapper_checkpoint.txt
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc      8192 Jun  5 16:34 boinc_mmap_file
[2025-06-05 16:34:27] -rw-r--r-- 1 boinc boinc     20930 Jun  5 16:34 stderr.txt
[2025-06-05 16:34:27] HITS file was successfully produced:
[2025-06-05 16:34:27] -rw------- 1 boinc boinc 176790107 Jun  5 16:31 shared/HITS.pool.root.1
[2025-06-05 16:34:27]  *** Contents of shared directory: ***
[2025-06-05 16:34:27] total 384940
[2025-06-05 16:34:27] -rw-r--r-- 2 boinc boinc 215599809 Jun  5 13:47 ATLAS.root_0
[2025-06-05 16:34:27] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:47 start_atlas.sh
[2025-06-05 16:34:27] -rw-r--r-- 2 boinc boinc    508880 Jun  5 13:47 input.tar.gz
[2025-06-05 16:34:27] -rw------- 1 boinc boinc 176790107 Jun  5 16:31 HITS.pool.root.1
[2025-06-05 16:34:27] -rw------- 1 boinc boinc   1249280 Jun  5 16:32 result.tar.gz
16:34:29 (2622132): run_atlas exited; CPU time 37772.323030
16:34:29 (2622132): called boinc_finish(0)

</stderr_txt>
]]>

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