Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:33:38 (4407): wrapper (7.7.26015): starting
06:33:38 (4407): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:33:38] Arguments: --nthreads 8
[2025-06-04 06:33:38] Threads: 8
[2025-06-04 06:33:38] Checking for CVMFS
[2025-06-04 06:33:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:33:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:33:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:33:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:33:40] 2.11.2.0 16765 32748 91776 146767 3 256 15513526 25165825 3133 130560 0 15773008 99.770 19730597 2082 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 06:33:40] CVMFS is ok
[2025-06-04 06:33:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:33:40] Checking for apptainer binary...
[2025-06-04 06:33:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:33:40] Running /usr/bin/apptainer --version
[2025-06-04 06:33:40] apptainer version 1.3.2-1.el7
[2025-06-04 06:33:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:21:22] cg-vwn404.simple-grid.lan
[2025-06-04 07:21:22] apptainer works
[2025-06-04 07:21:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:21:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:21:22] Starting ATLAS job with PandaID=6677863801
[2025-06-04 07:21:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:40:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:40:25] 2025-06-04 09:20:14,265 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677863801/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:40:25] 2025-06-04 09:20:14,266 | INFO     | extracted standard info from prmon json
[2025-06-04 11:40:25] 2025-06-04 09:20:14,266 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:40:25] 2025-06-04 09:20:14,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:40:25] 2025-06-04 09:20:14,266 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:40:25] 2025-06-04 09:20:14,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:40:25] 2025-06-04 09:20:14,271 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:40:25] 2025-06-04 09:20:14,272 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 11:40:25] 2025-06-04 09:20:14,274 | INFO     | sum of deviations: 41495761210.5
[2025-06-04 11:40:25] 2025-06-04 09:20:14,274 | INFO     | mean x: 1749021902.5
[2025-06-04 11:40:25] 2025-06-04 09:20:14,274 | INFO     | mean y: 2454993.9054054054
[2025-06-04 11:40:25] 2025-06-04 09:20:14,274 | INFO     | -- intersect: -21390483804.353138
[2025-06-04 11:40:25] 2025-06-04 09:20:14,275 | INFO     | intersect: -21390483804.353138
[2025-06-04 11:40:25] 2025-06-04 09:20:14,275 | INFO     | chi2: 5.583524495705508
[2025-06-04 11:40:25] 2025-06-04 09:20:14,275 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,277 | INFO     | sum of deviations: 55163500357.999985
[2025-06-04 11:40:25] 2025-06-04 09:20:14,278 | INFO     | mean x: 1749021750.0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,278 | INFO     | mean y: 2464112.271889401
[2025-06-04 11:40:25] 2025-06-04 09:20:14,278 | INFO     | -- intersect: -30448330065.55196
[2025-06-04 11:40:25] 2025-06-04 09:20:14,278 | INFO     | intersect: -30448330065.55196
[2025-06-04 11:40:25] 2025-06-04 09:20:14,278 | INFO     | chi2: 4.859943407329689
[2025-06-04 11:40:25] 2025-06-04 09:20:14,279 | INFO     | current chi2=4.859943407329689 (change=12.959217586174315 %)
[2025-06-04 11:40:25] 2025-06-04 09:20:14,279 | INFO     | right removable region: 216
[2025-06-04 11:40:25] 2025-06-04 09:20:14,279 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,281 | INFO     | sum of deviations: -30178024431.999992
[2025-06-04 11:40:25] 2025-06-04 09:20:14,281 | INFO     | mean x: 1749022055.0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,281 | INFO     | mean y: 2503679.65437788
[2025-06-04 11:40:25] 2025-06-04 09:20:14,281 | INFO     | -- intersect: 16661072569.535103
[2025-06-04 11:40:25] 2025-06-04 09:20:14,281 | INFO     | intersect: 16661072569.535103
[2025-06-04 11:40:25] 2025-06-04 09:20:14,282 | INFO     | chi2: 1.440173711993853
[2025-06-04 11:40:25] 2025-06-04 09:20:14,282 | INFO     | current chi2=1.440173711993853 (change=74.20672707531698 %)
[2025-06-04 11:40:25] 2025-06-04 09:20:14,282 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,284 | INFO     | sum of deviations: -49087431847.500015
[2025-06-04 11:40:25] 2025-06-04 09:20:14,284 | INFO     | mean x: 1749022207.5
[2025-06-04 11:40:25] 2025-06-04 09:20:14,284 | INFO     | mean y: 2517024.2783018867
[2025-06-04 11:40:25] 2025-06-04 09:20:14,284 | INFO     | -- intersect: 29062094236.745876
[2025-06-04 11:40:25] 2025-06-04 09:20:14,285 | INFO     | intersect: 29062094236.745876
[2025-06-04 11:40:25] 2025-06-04 09:20:14,285 | INFO     | chi2: 0.9550176555453265
[2025-06-04 11:40:25] 2025-06-04 09:20:14,285 | INFO     | current chi2=0.9550176555453265 (change=33.68732899428157 %)
[2025-06-04 11:40:25] 2025-06-04 09:20:14,285 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,287 | INFO     | sum of deviations: -42885494351.0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,288 | INFO     | mean x: 1749022360.0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,288 | INFO     | mean y: 2512385.1014492754
[2025-06-04 11:40:25] 2025-06-04 09:20:14,288 | INFO     | -- intersect: 27275107028.601665
[2025-06-04 11:40:25] 2025-06-04 09:20:14,288 | INFO     | intersect: 27275107028.601665
[2025-06-04 11:40:25] 2025-06-04 09:20:14,288 | INFO     | chi2: 0.9463234149578242
[2025-06-04 11:40:25] 2025-06-04 09:20:14,288 | INFO     | current chi2=0.9463234149578242 (change=0.9103748540164651 %)
[2025-06-04 11:40:25] 2025-06-04 09:20:14,288 | INFO     | left removable region: 30
[2025-06-04 11:40:25] 2025-06-04 09:20:14,289 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 11:40:25] 2025-06-04 09:20:14,290 | INFO     | sum of deviations: -7504219603.5
[2025-06-04 11:40:25] 2025-06-04 09:20:14,290 | INFO     | mean x: 1749022634.5
[2025-06-04 11:40:25] 2025-06-04 09:20:14,291 | INFO     | mean y: 2505562.9516129033
[2025-06-04 11:40:25] 2025-06-04 09:20:14,291 | INFO     | -- intersect: 6580541797.682069
[2025-06-04 11:40:25] 2025-06-04 09:20:14,291 | INFO     | intersect: 6580541797.682069
[2025-06-04 11:40:25] 2025-06-04 09:20:14,291 | INFO     | chi2: 0.07515338670150884
[2025-06-04 11:40:25] 2025-06-04 09:20:14,291 | INFO     | -- intersect: 6580541797.682069
[2025-06-04 11:40:25] 2025-06-04 09:20:14,291 | INFO     | current memory leak: -3.76 B/s (using 186 data points, chi2=0.08)
[2025-06-04 11:40:25] 2025-06-04 09:20:14,292 | INFO     | ..............................
[2025-06-04 11:40:25] 2025-06-04 09:20:14,293 | INFO     | . Timing measurements:
[2025-06-04 11:40:25] 2025-06-04 09:20:14,293 | INFO     | . get job = 0 s
[2025-06-04 11:40:25] 2025-06-04 09:20:14,293 | INFO     | . initial setup = 9 s
[2025-06-04 11:40:25] 2025-06-04 09:20:14,293 | INFO     | . payload setup = 146 s
[2025-06-04 11:40:25] 2025-06-04 09:20:14,293 | INFO     | . stage-in = 0 s
[2025-06-04 11:40:25] 2025-06-04 09:20:14,293 | INFO     | . payload execution = 13679 s
[2025-06-04 11:40:25] 2025-06-04 09:20:14,293 | INFO     | . stage-out = 4 s
[2025-06-04 11:40:25] 2025-06-04 09:20:14,293 | INFO     | . log creation = 1 s
[2025-06-04 11:40:25] 2025-06-04 09:20:14,293 | INFO     | ..............................
[2025-06-04 11:40:25] 2025-06-04 09:20:14,423 | INFO     | 
[2025-06-04 11:40:25] 2025-06-04 09:20:14,423 | INFO     | job summary report
[2025-06-04 11:40:25] 2025-06-04 09:20:14,424 | INFO     | --------------------------------------------------
[2025-06-04 11:40:25] 2025-06-04 09:20:14,424 | INFO     | PanDA job id: 6677863801
[2025-06-04 11:40:25] 2025-06-04 09:20:14,424 | INFO     | task id: 45006595
[2025-06-04 11:40:25] 2025-06-04 09:20:14,424 | INFO     | errors: (none)
[2025-06-04 11:40:25] 2025-06-04 09:20:14,424 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:40:25] 2025-06-04 09:20:14,424 | INFO     | pilot state: finished 
[2025-06-04 11:40:25] 2025-06-04 09:20:14,424 | INFO     | transexitcode: 0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,424 | INFO     | exeerrorcode: 0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,424 | INFO     | exeerrordiag: 
[2025-06-04 11:40:25] 2025-06-04 09:20:14,425 | INFO     | exitcode: 0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,425 | INFO     | exitmsg: OK
[2025-06-04 11:40:25] 2025-06-04 09:20:14,425 | INFO     | cpuconsumptiontime: 50487 s
[2025-06-04 11:40:25] 2025-06-04 09:20:14,425 | INFO     | nevents: 400
[2025-06-04 11:40:25] 2025-06-04 09:20:14,425 | INFO     | neventsw: 0
[2025-06-04 11:40:25] 2025-06-04 09:20:14,425 | INFO     | pid: 6433
[2025-06-04 11:40:25] 2025-06-04 09:20:14,425 | INFO     | pgrp: 6433
[2025-06-04 11:40:25] 2025-06-04 09:20:14,425 | INFO     | corecount: 8
[2025-06-04 11:40:25] 2025-06-04 09:20:14,425 | INFO     | event service: False
[2025-06-04 11:40:25] 2025-06-04 09:20:14,426 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 77: 2405508, 87: 2405564, 94: 2405798, 98: 2406106, 1
[2025-06-04 11:40:25] 2025-06-04 09:20:14,426 | INFO     | --------------------------------------------------
[2025-06-04 11:40:25] 2025-06-04 09:20:14,426 | INFO     | 
[2025-06-04 11:40:25] 2025-06-04 09:20:14,426 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 11:40:25] 2025-06-04 09:20:14,928 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,928 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,930 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:40:25] 2025-06-04 09:20:14,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,930 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:40:25] 2025-06-04 09:20:14,930 | INFO     | job 6677863801 has completed (purged errors)
[2025-06-04 11:40:25] 2025-06-04 09:20:14,930 | INFO     | overall cleanup function is called
[2025-06-04 11:40:25] 2025-06-04 09:20:15,942 | INFO     | --- collectZombieJob: --- 10, [6433]
[2025-06-04 11:40:25] 2025-06-04 09:20:15,942 | INFO     | zombie collector waiting for pid 6433
[2025-06-04 11:40:25] 2025-06-04 09:20:15,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:40:25] 2025-06-04 09:20:15,943 | INFO     | collected zombie processes
[2025-06-04 11:40:25] 2025-06-04 09:20:15,943 | INFO     | will attempt to kill all subprocesses of pid=6433
[2025-06-04 11:40:25] 2025-06-04 09:20:16,063 | INFO     | process IDs to be killed: [6433] (in reverse order)
[2025-06-04 11:40:25] 2025-06-04 09:20:17,061 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:40:25] 2025-06-04 09:20:17,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:40:25] 2025-06-04 09:20:17,065 | INFO     | did not find any defunct processes belonging to 6433
[2025-06-04 11:40:25] 2025-06-04 09:20:17,068 | INFO     | did not find any defunct processes belonging to 6433
[2025-06-04 11:40:25] 2025-06-04 09:20:17,069 | INFO     | ready for new job
[2025-06-04 11:40:25] 2025-06-04 09:20:17,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:40:25] 2025-06-04 09:20:17,071 | INFO     | **************************************
[2025-06-04 11:40:25] 2025-06-04 09:20:17,071 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:40:25] 2025-06-04 09:20:17,071 | INFO     | **************************************
[2025-06-04 11:40:25] 2025-06-04 09:20:17,071 | INFO     | 
[2025-06-04 11:40:25] 2025-06-04 09:20:17,072 | INFO     | pilot is running in a VM
[2025-06-04 11:40:25] 2025-06-04 09:20:17,072 | INFO     | architecture information:
[2025-06-04 11:40:25] 2025-06-04 09:20:17,079 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:40:25] 2025-06-04 09:20:17,260 | INFO     | cat /etc/os-release:
[2025-06-04 11:40:25] NAME="CentOS Linux"
[2025-06-04 11:40:25] VERSION="7 (Core)"
[2025-06-04 11:40:25] ID="centos"
[2025-06-04 11:40:25] ID_LIKE="rhel fedora"
[2025-06-04 11:40:25] VERSION_ID="7"
[2025-06-04 11:40:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:40:25] ANSI_COLOR="0;31"
[2025-06-04 11:40:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:40:25] HOME_URL="https://www.centos.org/"
[2025-06-04 11:40:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:40:25] 
[2025-06-04 11:40:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:40:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:40:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:40:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:40:25] 
[2025-06-04 11:40:25] 2025-06-04 09:20:17,261 | INFO     | **************************************
[2025-06-04 11:40:25] 2025-06-04 09:20:17,766 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 11:40:25] 2025-06-04 09:20:17,970 | INFO     | sufficient remaining disk space (496866689024 B)
[2025-06-04 11:40:25] 2025-06-04 09:20:17,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:40:25] 2025-06-04 09:20:17,970 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:40:25] 2025-06-04 09:20:17,970 | INFO     | update_server=False
[2025-06-04 11:40:25] 2025-06-04 09:20:17,970 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:40:25] 2025-06-04 09:20:17,971 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:40:25] 2025-06-04 09:20:17,971 | INFO     | aborting loop
[2025-06-04 11:40:25] 2025-06-04 09:20:18,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:40:25] 2025-06-04 09:20:18,496 | INFO     | all job control threads have been joined
[2025-06-04 11:40:25] 2025-06-04 09:20:18,768 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:40:25] 2025-06-04 09:20:18,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:40:25] 2025-06-04 09:20:18,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:40:25] 2025-06-04 09:20:18,905 | INFO     | all data control threads have been joined
[2025-06-04 11:40:25] 2025-06-04 09:20:18,946 | INFO     | all payload control threads have been joined
[2025-06-04 11:40:25] 2025-06-04 09:20:18,976 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:18,977 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:19,036 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:19,126 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:19,191 | INFO     | [job] validate thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:19,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:40:25] 2025-06-04 09:20:19,449 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:19,450 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:19,502 | INFO     | [job] control thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:19,650 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:19,911 | INFO     | [data] control thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:19,952 | INFO     | [payload] control thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:20,050 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:20,057 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:20,442 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:20,562 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:21,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:40:25] 2025-06-04 09:20:25,037 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:40:25] 2025-06-04 09:20:26,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424803018560)>', '<ExcThread(monitor, started 140424215783168)>']
[2025-06-04 11:40:25] 2025-06-04 09:20:26,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:40:25] 2025-06-04 09:20:26,816 | INFO     | [monitor] control thread has ended
[2025-06-04 11:40:25] 2025-06-04 09:20:31,103 | INFO     | all workflow threads have been joined
[2025-06-04 11:40:25] 2025-06-04 09:20:31,103 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:40:25] 2025-06-04 09:20:31,104 | INFO     | traces error code: 0
[2025-06-04 11:40:25] 2025-06-04 09:20:31,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:40:25] 2025-06-04 09:20:31,484 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:40:25] 2025-06-04 09:20:31,516 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:40:25] 2025-06-04 09:20:31,552 [wrapper] pilotpid: 28272
[2025-06-04 11:40:25] 2025-06-04 09:20:31,584 [wrapper] Pilot exit status: 0
[2025-06-04 11:40:25] 2025-06-04 09:20:32,006 [wrapper] pandaids: 6677863801
[2025-06-04 11:40:25] 2025-06-04 09:20:32,279 [wrapper] cleanup supervisor_pilot  5685 28273
[2025-06-04 11:40:25] 2025-06-04 09:20:32,333 [wrapper] Test setup, not cleaning
[2025-06-04 11:40:25] 2025-06-04 09:20:32,413 [wrapper] apfmon messages muted
[2025-06-04 11:40:25] 2025-06-04 09:20:32,495 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:40:25] 2025-06-04 09:20:32,587 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:40:25]  *** Error codes and diagnostics ***
[2025-06-04 11:40:25]     "exeErrorCode": 0,
[2025-06-04 11:40:25]     "exeErrorDiag": "",
[2025-06-04 11:40:25]     "pilotErrorCode": 0,
[2025-06-04 11:40:25]     "pilotErrorDiag": "",
[2025-06-04 11:40:25]  *** Listing of results directory ***
[2025-06-04 11:40:25] total 391156
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:29 queuedata.json
[2025-06-04 11:40:25] -rwx------. 1 boinc boinc     37140 Jun  3 19:29 runpilot2-wrapper.sh
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc       100 Jun  4 06:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:40:25] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 06:33 run_atlas
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc       105 Jun  4 06:33 job.xml
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc      6392 Jun  4 06:33 init_data.xml
[2025-06-04 11:40:25] -rw-r--r--. 2 boinc boinc 214784825 Jun  4 06:33 EVNT.45006593._001628.pool.root.1
[2025-06-04 11:40:25] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:33 start_atlas.sh
[2025-06-04 11:40:25] drwxrwx--x. 2 boinc boinc        68 Jun  4 06:33 shared
[2025-06-04 11:40:25] -rw-r--r--. 2 boinc boinc    508885 Jun  4 06:33 input.tar.gz
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc         0 Jun  4 06:33 boinc_lockfile
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc      2525 Jun  4 07:21 pandaJob.out
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc    986745 Jun  4 07:24 agis_schedconf.cvmfs.json
[2025-06-04 11:40:25] drwx------. 4 boinc boinc      4096 Jun  4 07:24 pilot3
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc 178763061 Jun  4 11:16 HITS.45006595._040628.pool.root.1
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc       531 Jun  4 11:16 boinc_task_state.xml
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc      1016 Jun  4 11:18 memory_monitor_summary.json
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc   1603667 Jun  4 11:18 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc    383129 Jun  4 11:18 log.45006595._040628.job.log.tgz.1
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc        95 Jun  4 11:20 pilot_heartbeat.json
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc      7692 Jun  4 11:20 heartbeat.json
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc      4416 Jun  4 11:20 pilotlog.txt
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc   1201922 Jun  4 11:20 log.45006595._040628.job.log.1
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc       357 Jun  4 11:20 output.list
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:20 runtime_log
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc   1607680 Jun  4 11:20 result.tar.gz
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc      8659 Jun  4 11:20 runtime_log.err
[2025-06-04 11:40:25] -rw-------. 1 boinc boinc       657 Jun  4 11:20 6OVMDmOdkg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfRZKDmc65O7m.diag
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc      8192 Jun  4 11:40 boinc_mmap_file
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc        28 Jun  4 11:40 wrapper_checkpoint.txt
[2025-06-04 11:40:25] -rw-r--r--. 1 boinc boinc     20518 Jun  4 11:40 stderr.txt
[2025-06-04 11:40:26] HITS file was successfully produced:
[2025-06-04 11:40:26] -rw-------. 1 boinc boinc 178763061 Jun  4 11:16 shared/HITS.pool.root.1
[2025-06-04 11:40:26]  *** Contents of shared directory: ***
[2025-06-04 11:40:26] total 386416
[2025-06-04 11:40:26] -rw-r--r--. 2 boinc boinc 214784825 Jun  4 06:33 ATLAS.root_0
[2025-06-04 11:40:26] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:33 start_atlas.sh
[2025-06-04 11:40:26] -rw-r--r--. 2 boinc boinc    508885 Jun  4 06:33 input.tar.gz
[2025-06-04 11:40:26] -rw-------. 1 boinc boinc 178763061 Jun  4 11:16 HITS.pool.root.1
[2025-06-04 11:40:26] -rw-------. 1 boinc boinc   1607680 Jun  4 11:20 result.tar.gz
11:40:27 (4407): run_atlas exited; CPU time 50683.612990
11:40:27 (4407): called boinc_finish(0)

</stderr_txt>
]]>

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