Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:57:27 (32463): wrapper (7.7.26015): starting
05:57:27 (32463): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:57:27] Arguments: --nthreads 8
[2025-06-04 05:57:27] Threads: 8
[2025-06-04 05:57:27] Checking for CVMFS
[2025-06-04 05:57:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:57:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:57:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:57:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:57:28] 2.11.2.0 2201 32685 90160 146767 1 110 22626733 25165824 4009 130560 0 16707833 99.791 19197656 2215 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 05:57:28] CVMFS is ok
[2025-06-04 05:57:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:57:28] Checking for apptainer binary...
[2025-06-04 05:57:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:57:28] Running /usr/bin/apptainer --version
[2025-06-04 05:57:28] apptainer version 1.3.2-1.el7
[2025-06-04 05:57:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:57:30] cg-vwn381.simple-grid.lan
[2025-06-04 05:57:30] apptainer works
[2025-06-04 05:57:30] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:57:30] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:57:30] Starting ATLAS job with PandaID=6677862539
[2025-06-04 05:57:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:15:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:15:21] 2025-06-04 07:26:49,844 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:15:21] 2025-06-04 07:26:49,844 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:15:21] 2025-06-04 07:26:49,845 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:15:21] 2025-06-04 07:26:49,845 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:15:21] 2025-06-04 07:26:49,850 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:15:21] 2025-06-04 07:26:49,850 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 10:15:21] 2025-06-04 07:26:49,858 | INFO     | sum of deviations: -29019215056.999996
[2025-06-04 10:15:21] 2025-06-04 07:26:49,859 | INFO     | mean x: 1749015717.0
[2025-06-04 10:15:21] 2025-06-04 07:26:49,859 | INFO     | mean y: 2512662.275862069
[2025-06-04 10:15:21] 2025-06-04 07:26:49,859 | INFO     | -- intersect: 19569473436.797207
[2025-06-04 10:15:21] 2025-06-04 07:26:49,859 | INFO     | intersect: 19569473436.797207
[2025-06-04 10:15:21] 2025-06-04 07:26:49,859 | INFO     | chi2: 2.7100436985482887
[2025-06-04 10:15:21] 2025-06-04 07:26:49,860 | INFO     | sum of square deviations: 2406926989.5
[2025-06-04 10:15:21] 2025-06-04 07:26:49,861 | INFO     | sum of deviations: -14717638146.500011
[2025-06-04 10:15:21] 2025-06-04 07:26:49,862 | INFO     | mean x: 1749015564.5
[2025-06-04 10:15:21] 2025-06-04 07:26:49,862 | INFO     | mean y: 2524108.601010101
[2025-06-04 10:15:21] 2025-06-04 07:26:49,862 | INFO     | -- intersect: 10697230804.401035
[2025-06-04 10:15:21] 2025-06-04 07:26:49,862 | INFO     | intersect: 10697230804.401035
[2025-06-04 10:15:21] 2025-06-04 07:26:49,862 | INFO     | chi2: 1.9453485456303177
[2025-06-04 10:15:21] 2025-06-04 07:26:49,862 | INFO     | current chi2=1.9453485456303177 (change=28.21707831971867 %)
[2025-06-04 10:15:21] 2025-06-04 07:26:49,863 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 10:15:21] 2025-06-04 07:26:49,864 | INFO     | sum of deviations: -14142039432.000008
[2025-06-04 10:15:21] 2025-06-04 07:26:49,865 | INFO     | mean x: 1749015412.0
[2025-06-04 10:15:21] 2025-06-04 07:26:49,865 | INFO     | mean y: 2524602.3834196893
[2025-06-04 10:15:21] 2025-06-04 07:26:49,865 | INFO     | -- intersect: 11098538414.00237
[2025-06-04 10:15:21] 2025-06-04 07:26:49,865 | INFO     | intersect: 11098538414.00237
[2025-06-04 10:15:21] 2025-06-04 07:26:49,865 | INFO     | chi2: 1.943841578097645
[2025-06-04 10:15:21] 2025-06-04 07:26:49,865 | INFO     | current chi2=1.943841578097645 (change=0.07746516869985257 %)
[2025-06-04 10:15:21] 2025-06-04 07:26:49,866 | INFO     | right removable region: 192
[2025-06-04 10:15:21] 2025-06-04 07:26:49,866 | INFO     | sum of square deviations: 2406926989.5
[2025-06-04 10:15:21] 2025-06-04 07:26:49,868 | INFO     | sum of deviations: -64928841243.500015
[2025-06-04 10:15:21] 2025-06-04 07:26:49,879 | INFO     | mean x: 1749015869.5
[2025-06-04 10:15:21] 2025-06-04 07:26:49,879 | INFO     | mean y: 2541680.47979798
[2025-06-04 10:15:21] 2025-06-04 07:26:49,879 | INFO     | -- intersect: 47183687688.86712
[2025-06-04 10:15:21] 2025-06-04 07:26:49,880 | INFO     | intersect: 47183687688.86712
[2025-06-04 10:15:21] 2025-06-04 07:26:49,880 | INFO     | chi2: 1.0161907017004332
[2025-06-04 10:15:21] 2025-06-04 07:26:49,880 | INFO     | current chi2=1.0161907017004332 (change=62.50279276881091 %)
[2025-06-04 10:15:21] 2025-06-04 07:26:49,881 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 10:15:21] 2025-06-04 07:26:49,882 | INFO     | sum of deviations: -63984149157.99997
[2025-06-04 10:15:21] 2025-06-04 07:26:49,882 | INFO     | mean x: 1749016022.0
[2025-06-04 10:15:21] 2025-06-04 07:26:49,882 | INFO     | mean y: 2540825.2642487045
[2025-06-04 10:15:21] 2025-06-04 07:26:49,883 | INFO     | -- intersect: 50205289432.34204
[2025-06-04 10:15:21] 2025-06-04 07:26:49,883 | INFO     | intersect: 50205289432.34204
[2025-06-04 10:15:21] 2025-06-04 07:26:49,883 | INFO     | chi2: 0.9963709463453869
[2025-06-04 10:15:21] 2025-06-04 07:26:49,883 | INFO     | current chi2=0.9963709463453869 (change=1.9503972356646364 %)
[2025-06-04 10:15:21] 2025-06-04 07:26:49,883 | INFO     | left removable region: 20
[2025-06-04 10:15:21] 2025-06-04 07:26:49,884 | INFO     | sum of square deviations: 1577789583.0
[2025-06-04 10:15:21] 2025-06-04 07:26:49,885 | INFO     | sum of deviations: -37531482169.49999
[2025-06-04 10:15:21] 2025-06-04 07:26:49,885 | INFO     | mean x: 1749015991.5
[2025-06-04 10:15:21] 2025-06-04 07:26:49,885 | INFO     | mean y: 2544369.4941860465
[2025-06-04 10:15:21] 2025-06-04 07:26:49,885 | INFO     | -- intersect: 41607054379.21238
[2025-06-04 10:15:21] 2025-06-04 07:26:49,885 | INFO     | intersect: 41607054379.21238
[2025-06-04 10:15:21] 2025-06-04 07:26:49,886 | INFO     | chi2: 0.18720531001740429
[2025-06-04 10:15:21] 2025-06-04 07:26:49,886 | INFO     | -- intersect: 41607054379.21238
[2025-06-04 10:15:21] 2025-06-04 07:26:49,886 | INFO     | current memory leak: -23.79 B/s (using 172 data points, chi2=0.19)
[2025-06-04 10:15:21] 2025-06-04 07:26:49,887 | INFO     | ..............................
[2025-06-04 10:15:21] 2025-06-04 07:26:49,887 | INFO     | . Timing measurements:
[2025-06-04 10:15:21] 2025-06-04 07:26:49,887 | INFO     | . get job = 0 s
[2025-06-04 10:15:21] 2025-06-04 07:26:49,887 | INFO     | . initial setup = 2 s
[2025-06-04 10:15:21] 2025-06-04 07:26:49,887 | INFO     | . payload setup = 15 s
[2025-06-04 10:15:21] 2025-06-04 07:26:49,888 | INFO     | . stage-in = 0 s
[2025-06-04 10:15:21] 2025-06-04 07:26:49,888 | INFO     | . payload execution = 12376 s
[2025-06-04 10:15:21] 2025-06-04 07:26:49,888 | INFO     | . stage-out = 4 s
[2025-06-04 10:15:21] 2025-06-04 07:26:49,888 | INFO     | . log creation = 1 s
[2025-06-04 10:15:21] 2025-06-04 07:26:49,888 | INFO     | ..............................
[2025-06-04 10:15:21] 2025-06-04 07:26:50,114 | INFO     | 
[2025-06-04 10:15:21] 2025-06-04 07:26:50,114 | INFO     | job summary report
[2025-06-04 10:15:21] 2025-06-04 07:26:50,114 | INFO     | --------------------------------------------------
[2025-06-04 10:15:21] 2025-06-04 07:26:50,114 | INFO     | PanDA job id: 6677862539
[2025-06-04 10:15:21] 2025-06-04 07:26:50,114 | INFO     | task id: 45006595
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | errors: (none)
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | pilot state: finished 
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | transexitcode: 0
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | exeerrorcode: 0
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | exeerrordiag: 
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | exitcode: 0
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | exitmsg: OK
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | cpuconsumptiontime: 47167 s
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | nevents: 400
[2025-06-04 10:15:21] 2025-06-04 07:26:50,115 | INFO     | neventsw: 0
[2025-06-04 10:15:21] 2025-06-04 07:26:50,116 | INFO     | pid: 14388
[2025-06-04 10:15:21] 2025-06-04 07:26:50,116 | INFO     | pgrp: 14388
[2025-06-04 10:15:21] 2025-06-04 07:26:50,116 | INFO     | corecount: 8
[2025-06-04 10:15:21] 2025-06-04 07:26:50,116 | INFO     | event service: False
[2025-06-04 10:15:21] 2025-06-04 07:26:50,116 | INFO     | sizes: {0: 2405014, 1: 2405213, 12: 2405213, 19: 2405447, 22: 2405475, 12395: 2434548, 12396: 2434675, 12401: 2443674, 12404: 2443730, 12498: 2443900}
[2025-06-04 10:15:21] 2025-06-04 07:26:50,116 | INFO     | --------------------------------------------------
[2025-06-04 10:15:21] 2025-06-04 07:26:50,116 | INFO     | 
[2025-06-04 10:15:21] 2025-06-04 07:26:50,116 | INFO     | executing command: ls -lF /var/lib/boinc/slots/23
[2025-06-04 10:15:21] 2025-06-04 07:26:50,536 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,536 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,536 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,536 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,537 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,538 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:15:21] 2025-06-04 07:26:50,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,538 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:15:21] 2025-06-04 07:26:50,538 | INFO     | job 6677862539 has completed (purged errors)
[2025-06-04 10:15:21] 2025-06-04 07:26:50,538 | INFO     | overall cleanup function is called
[2025-06-04 10:15:21] 2025-06-04 07:26:51,547 | INFO     | --- collectZombieJob: --- 10, [14388]
[2025-06-04 10:15:21] 2025-06-04 07:26:51,547 | INFO     | zombie collector waiting for pid 14388
[2025-06-04 10:15:21] 2025-06-04 07:26:51,547 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:15:21] 2025-06-04 07:26:51,547 | INFO     | collected zombie processes
[2025-06-04 10:15:21] 2025-06-04 07:26:51,548 | INFO     | will attempt to kill all subprocesses of pid=14388
[2025-06-04 10:15:21] 2025-06-04 07:26:51,661 | INFO     | process IDs to be killed: [14388] (in reverse order)
[2025-06-04 10:15:21] 2025-06-04 07:26:52,395 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:15:21] 2025-06-04 07:26:52,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:15:21] 2025-06-04 07:26:52,399 | INFO     | did not find any defunct processes belonging to 14388
[2025-06-04 10:15:21] 2025-06-04 07:26:52,402 | INFO     | did not find any defunct processes belonging to 14388
[2025-06-04 10:15:21] 2025-06-04 07:26:52,404 | INFO     | ready for new job
[2025-06-04 10:15:21] 2025-06-04 07:26:52,404 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:15:21] 2025-06-04 07:26:52,406 | INFO     | **************************************
[2025-06-04 10:15:21] 2025-06-04 07:26:52,406 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:15:21] 2025-06-04 07:26:52,407 | INFO     | **************************************
[2025-06-04 10:15:21] 2025-06-04 07:26:52,407 | INFO     | 
[2025-06-04 10:15:21] 2025-06-04 07:26:52,411 | INFO     | pilot is running in a VM
[2025-06-04 10:15:21] 2025-06-04 07:26:52,411 | INFO     | architecture information:
[2025-06-04 10:15:21] 2025-06-04 07:26:52,426 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:15:21] 2025-06-04 07:26:52,683 | INFO     | cat /etc/os-release:
[2025-06-04 10:15:21] NAME="CentOS Linux"
[2025-06-04 10:15:21] VERSION="7 (Core)"
[2025-06-04 10:15:21] ID="centos"
[2025-06-04 10:15:21] ID_LIKE="rhel fedora"
[2025-06-04 10:15:21] VERSION_ID="7"
[2025-06-04 10:15:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:15:21] ANSI_COLOR="0;31"
[2025-06-04 10:15:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:15:21] HOME_URL="https://www.centos.org/"
[2025-06-04 10:15:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:15:21] 
[2025-06-04 10:15:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:15:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:15:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:15:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:15:21] 
[2025-06-04 10:15:21] 2025-06-04 07:26:52,683 | INFO     | **************************************
[2025-06-04 10:15:21] 2025-06-04 07:26:53,187 | INFO     | executing command: df -mP /var/lib/boinc/slots/23
[2025-06-04 10:15:21] 2025-06-04 07:26:53,423 | INFO     | sufficient remaining disk space (496762880000 B)
[2025-06-04 10:15:21] 2025-06-04 07:26:53,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:15:21] 2025-06-04 07:26:53,423 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:15:21] 2025-06-04 07:26:53,423 | INFO     | update_server=False
[2025-06-04 10:15:21] 2025-06-04 07:26:53,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:15:21] 2025-06-04 07:26:53,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:15:21] 2025-06-04 07:26:53,474 | INFO     | all payload control threads have been joined
[2025-06-04 10:15:21] 2025-06-04 07:26:53,614 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:15:21] 2025-06-04 07:26:53,614 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:15:21] 2025-06-04 07:26:53,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:15:21] 2025-06-04 07:26:53,614 | INFO     | will abort loop
[2025-06-04 10:15:21] 2025-06-04 07:26:53,958 | INFO     | all data control threads have been joined
[2025-06-04 10:15:21] 2025-06-04 07:26:54,045 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:15:21] 2025-06-04 07:26:54,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:15:21] 2025-06-04 07:26:54,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:15:21] 2025-06-04 07:26:54,319 | INFO     | all job control threads have been joined
[2025-06-04 10:15:21] 2025-06-04 07:26:54,430 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:54,471 | INFO     | [job] validate thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:54,480 | INFO     | [payload] control thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:54,487 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:54,577 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:54,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:15:21] 2025-06-04 07:26:54,620 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:54,964 | INFO     | [data] control thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:55,124 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:55,127 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:55,128 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:55,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:15:21] 2025-06-04 07:26:55,325 | INFO     | [job] control thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:55,603 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:55,715 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:56,136 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:56,589 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:57,433 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:15:21] 2025-06-04 07:26:58,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507475232576)>', '<ExcThread(monitor, started 140507256727296)>']
[2025-06-04 10:15:21] 2025-06-04 07:26:59,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:15:21] 2025-06-04 07:26:59,075 | INFO     | [monitor] control thread has ended
[2025-06-04 10:15:21] 2025-06-04 07:27:03,494 | INFO     | all workflow threads have been joined
[2025-06-04 10:15:21] 2025-06-04 07:27:03,494 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:15:21] 2025-06-04 07:27:03,495 | INFO     | traces error code: 0
[2025-06-04 10:15:21] 2025-06-04 07:27:03,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:15:21] 2025-06-04 07:27:03,878 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:15:21] 2025-06-04 07:27:03,990 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:15:21] 2025-06-04 07:27:04,075 [wrapper] pilotpid: 5771
[2025-06-04 10:15:21] 2025-06-04 07:27:04,175 [wrapper] Pilot exit status: 0
[2025-06-04 10:15:21] 2025-06-04 07:27:04,683 [wrapper] pandaids: 6677862539
[2025-06-04 10:15:21] 2025-06-04 07:27:05,472 [wrapper] cleanup supervisor_pilot 25356 5772
[2025-06-04 10:15:21] 2025-06-04 07:27:05,549 [wrapper] Test setup, not cleaning
[2025-06-04 10:15:21] 2025-06-04 07:27:05,630 [wrapper] apfmon messages muted
[2025-06-04 10:15:21] 2025-06-04 07:27:05,707 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:15:21] 2025-06-04 07:27:05,803 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:15:21]  *** Error codes and diagnostics ***
[2025-06-04 10:15:21]     "exeErrorCode": 0,
[2025-06-04 10:15:21]     "exeErrorDiag": "",
[2025-06-04 10:15:21]     "pilotErrorCode": 0,
[2025-06-04 10:15:21]     "pilotErrorDiag": "",
[2025-06-04 10:15:21]  *** Listing of results directory ***
[2025-06-04 10:15:21] total 384764
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:20 queuedata.json
[2025-06-04 10:15:21] -rwx------. 1 boinc boinc     37140 Jun  3 19:22 runpilot2-wrapper.sh
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc       100 Jun  4 05:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:15:21] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 05:57 run_atlas
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc       105 Jun  4 05:57 job.xml
[2025-06-04 10:15:21] -rw-r--r--. 2 boinc boinc 215909908 Jun  4 05:57 EVNT.45006593._001624.pool.root.1
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc      6392 Jun  4 05:57 init_data.xml
[2025-06-04 10:15:21] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:57 start_atlas.sh
[2025-06-04 10:15:21] drwxrwx--x. 2 boinc boinc        68 Jun  4 05:57 shared
[2025-06-04 10:15:21] -rw-r--r--. 2 boinc boinc    508879 Jun  4 05:57 input.tar.gz
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc         0 Jun  4 05:57 boinc_lockfile
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc      2525 Jun  4 05:57 pandaJob.out
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc    986077 Jun  4 05:57 agis_schedconf.cvmfs.json
[2025-06-04 10:15:21] drwx------. 4 boinc boinc      4096 Jun  4 05:57 pilot3
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc 171356071 Jun  4 09:23 HITS.45006595._040529.pool.root.1
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc       530 Jun  4 09:24 boinc_task_state.xml
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc      1013 Jun  4 09:25 memory_monitor_summary.json
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc   1603667 Jun  4 09:25 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc    371813 Jun  4 09:25 log.45006595._040529.job.log.tgz.1
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc        95 Jun  4 09:26 pilot_heartbeat.json
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc      7691 Jun  4 09:26 heartbeat.json
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc      4603 Jun  4 09:27 pilotlog.txt
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc   1087832 Jun  4 09:27 log.45006595._040529.job.log.1
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc       357 Jun  4 09:27 output.list
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc       620 Jun  4 09:27 runtime_log
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc   1474560 Jun  4 09:27 result.tar.gz
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc      8673 Jun  4 09:27 runtime_log.err
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc       657 Jun  4 09:27 c2UKDmFWkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6KlKDm5mx17n.diag
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc      8192 Jun  4 10:15 boinc_mmap_file
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc        28 Jun  4 10:15 wrapper_checkpoint.txt
[2025-06-04 10:15:21] -rw-r--r--. 1 boinc boinc     20495 Jun  4 10:15 stderr.txt
[2025-06-04 10:15:21] HITS file was successfully produced:
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc 171356071 Jun  4 09:23 shared/HITS.pool.root.1
[2025-06-04 10:15:21]  *** Contents of shared directory: ***
[2025-06-04 10:15:21] total 380148
[2025-06-04 10:15:21] -rw-r--r--. 2 boinc boinc 215909908 Jun  4 05:57 ATLAS.root_0
[2025-06-04 10:15:21] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:57 start_atlas.sh
[2025-06-04 10:15:21] -rw-r--r--. 2 boinc boinc    508879 Jun  4 05:57 input.tar.gz
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc 171356071 Jun  4 09:23 HITS.pool.root.1
[2025-06-04 10:15:21] -rw-------. 1 boinc boinc   1474560 Jun  4 09:27 result.tar.gz
10:15:23 (32463): run_atlas exited; CPU time 47332.393957
10:15:23 (32463): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN