Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:39:10 (1033784): wrapper (7.7.26015): starting
06:39:10 (1033784): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 06:39:10] Arguments: --nthreads 3
[2025-06-04 06:39:10] Threads: 3
[2025-06-04 06:39:10] Checking for CVMFS
[2025-06-04 06:39:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:39:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:39:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:39:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:39:10] 2.9.2.0 321233 2094 82320 146767 0 56 31415004 36864000 0 130560 0 1933651 99.993 520553 35583 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 06:39:10] CVMFS is ok
[2025-06-04 06:39:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:39:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:39:10] Further information can be found at the LHC@home message board.
[2025-06-04 06:39:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:39:10] Checking for apptainer binary...
[2025-06-04 06:39:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:39:10] Running /usr/bin/apptainer --version
[2025-06-04 06:39:10] apptainer version 1.3.6-6.1
[2025-06-04 06:39:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:39:10] thA337a
[2025-06-04 06:39:10] apptainer works
[2025-06-04 06:39:10] Set ATHENA_PROC_NUMBER=3
[2025-06-04 06:39:10] Set ATHENA_CORE_NUMBER=3
[2025-06-04 06:39:10] Starting ATLAS job with PandaID=6677786599
[2025-06-04 06:39:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:52:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:52:58]  protocol_id=None
[2025-06-04 07:52:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:52:58]  replicas=None
[2025-06-04 07:52:58]  scope=mc23_13p6TeV
[2025-06-04 07:52:58]  status=None
[2025-06-04 07:52:58]  status_code=0
[2025-06-04 07:52:58]  storage_token=
[2025-06-04 07:52:58]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677786599/log.45006595._039937.job.log.tgz.1
[2025-06-04 07:52:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/d2/log.45006595._039937.job.log.tgz.1
[2025-06-04 07:52:58]  workdir=None
[2025-06-04 07:52:58] ]
[2025-06-04 07:52:58] 2025-06-04 05:52:29,771 | INFO     | transferring file log.45006595._039937.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677786599/log.45006595._039937.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 07:52:58] 2025-06-04 05:52:29,771 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677786599/log.45006595._039937.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0399
[2025-06-04 07:52:58] 2025-06-04 05:52:29,785 | INFO     | adding to output.list: log.45006595._039937.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/d2/log.45006595._039937.job.log.tg
[2025-06-04 07:52:58] 2025-06-04 05:52:29,786 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:52:58] 2025-06-04 05:52:29,786 | INFO     | summary of transferred files:
[2025-06-04 07:52:58] 2025-06-04 05:52:29,786 | INFO     |  -- lfn=log.45006595._039937.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:52:58] 2025-06-04 05:52:29,786 | INFO     | stage-out finished correctly
[2025-06-04 07:52:58] 2025-06-04 05:52:31,319 | INFO     | monitor loop #340: job 0:6677786599 is in state 'finished'
[2025-06-04 07:52:58] 2025-06-04 05:52:31,320 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:52:58] 2025-06-04 05:52:32,847 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:52:58] 2025-06-04 05:52:33,823 | INFO     | monitor loop #341: job 0:6677786599 is in state 'finished'
[2025-06-04 07:52:58] 2025-06-04 05:52:33,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:52:58] 2025-06-04 05:52:34,803 | INFO     | PID=1037426 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 07:52:58] 2025-06-04 05:52:35,821 | INFO     | job 6677786599 has state=finished
[2025-06-04 07:52:58] 2025-06-04 05:52:35,821 | INFO     | preparing for final server update for job 6677786599 in state='finished'
[2025-06-04 07:52:58] 2025-06-04 05:52:35,822 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:52:58] 2025-06-04 05:52:35,822 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:52:58] 2025-06-04 05:52:35,822 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:52:58] 2025-06-04 05:52:35,823 | INFO     | job 6677786599 has finished - writing final server update
[2025-06-04 07:52:58] 2025-06-04 05:52:35,823 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:52:58] 2025-06-04 05:52:35,825 | INFO     | executing command: lscpu
[2025-06-04 07:52:58] 2025-06-04 05:52:35,842 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:52:58] 2025-06-04 05:52:36,326 | INFO     | monitor loop #342: job 0:6677786599 is in state 'finished'
[2025-06-04 07:52:58] 2025-06-04 05:52:36,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:52:58] 2025-06-04 05:52:38,829 | INFO     | monitor loop #343: job 0:6677786599 is in state 'finished'
[2025-06-04 07:52:58] 2025-06-04 05:52:38,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:52:58] 2025-06-04 05:52:39,447 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:52:58] 2025-06-04 05:52:39,447 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677786599/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:52:58] 2025-06-04 05:52:39,448 | INFO     | extracted standard info from prmon json
[2025-06-04 07:52:58] 2025-06-04 05:52:39,448 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:52:58] 2025-06-04 05:52:39,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:52:58] 2025-06-04 05:52:39,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:52:58] 2025-06-04 05:52:39,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:52:58] 2025-06-04 05:52:39,448 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | sum of square deviations: 85136480.0
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | sum of deviations: -5073533236.000001
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | mean x: 1749014233.0
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | mean y: 2396059.7384615387
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | -- intersect: 104231298186.80022
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | intersect: 104231298186.80022
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | chi2: 0.12095070465065735
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | -- intersect: 104231298186.80022
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | current memory leak: -59.59 B/s (using 65 data points, chi2=0.12)
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | ..............................
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | . Timing measurements:
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | . get job = 0 s
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | . initial setup = 1 s
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | . payload setup = 3 s
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | . stage-in = 0 s
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | . payload execution = 4373 s
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | . stage-out = 0 s
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | . log creation = 0 s
[2025-06-04 07:52:58] 2025-06-04 05:52:39,449 | INFO     | ..............................
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | 
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | job summary report
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | --------------------------------------------------
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | PanDA job id: 6677786599
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | task id: 45006595
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | errors: (none)
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | pilot state: finished 
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | transexitcode: 0
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | exeerrorcode: 0
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | exeerrordiag: 
[2025-06-04 07:52:58] 2025-06-04 05:52:39,480 | INFO     | exitcode: 0
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | exitmsg: OK
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | cpuconsumptiontime: 12542 s
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | nevents: 400
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | neventsw: 0
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | pid: 1043918
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | pgrp: 1043918
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | corecount: 3
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | event service: False
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | sizes: {0: 2405185, 3: 2405391, 11: 2405419, 4380: 2431522, 4381: 2440469, 4384: 2440525, 4390: 2440823}
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | --------------------------------------------------
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | 
[2025-06-04 07:52:58] 2025-06-04 05:52:39,481 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 07:52:58] 2025-06-04 05:52:39,493 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,493 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | job 6677786599 has completed (purged errors)
[2025-06-04 07:52:58] 2025-06-04 05:52:39,494 | INFO     | overall cleanup function is called
[2025-06-04 07:52:58] 2025-06-04 05:52:40,501 | INFO     | --- collectZombieJob: --- 10, [1043918]
[2025-06-04 07:52:58] 2025-06-04 05:52:40,501 | INFO     | zombie collector waiting for pid 1043918
[2025-06-04 07:52:58] 2025-06-04 05:52:40,501 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:52:58] 2025-06-04 05:52:40,501 | INFO     | collected zombie processes
[2025-06-04 07:52:58] 2025-06-04 05:52:40,501 | INFO     | will attempt to kill all subprocesses of pid=1043918
[2025-06-04 07:52:58] 2025-06-04 05:52:40,542 | INFO     | process IDs to be killed: [1043918] (in reverse order)
[2025-06-04 07:52:58] 2025-06-04 05:52:40,568 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:52:58] 2025-06-04 05:52:40,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:52:58] 2025-06-04 05:52:40,569 | INFO     | did not find any defunct processes belonging to 1043918
[2025-06-04 07:52:58] 2025-06-04 05:52:40,570 | INFO     | did not find any defunct processes belonging to 1043918
[2025-06-04 07:52:58] 2025-06-04 05:52:40,570 | INFO     | ready for new job
[2025-06-04 07:52:58] 2025-06-04 05:52:40,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:52:58] 2025-06-04 05:52:40,571 | INFO     | **************************************
[2025-06-04 07:52:58] 2025-06-04 05:52:40,571 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:52:58] 2025-06-04 05:52:40,571 | INFO     | **************************************
[2025-06-04 07:52:58] 2025-06-04 05:52:40,571 | INFO     | 
[2025-06-04 07:52:58] 2025-06-04 05:52:40,571 | INFO     | architecture information:
[2025-06-04 07:52:58] 2025-06-04 05:52:40,571 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:52:58] 2025-06-04 05:52:40,581 | INFO     | cat /etc/os-release:
[2025-06-04 07:52:58] NAME="CentOS Linux"
[2025-06-04 07:52:58] VERSION="7 (Core)"
[2025-06-04 07:52:58] ID="centos"
[2025-06-04 07:52:58] ID_LIKE="rhel fedora"
[2025-06-04 07:52:58] VERSION_ID="7"
[2025-06-04 07:52:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:52:58] ANSI_COLOR="0;31"
[2025-06-04 07:52:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:52:58] HOME_URL="https://www.centos.org/"
[2025-06-04 07:52:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:52:58] 
[2025-06-04 07:52:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:52:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:52:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:52:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:52:58] 
[2025-06-04 07:52:58] 2025-06-04 05:52:40,581 | INFO     | **************************************
[2025-06-04 07:52:58] 2025-06-04 05:52:41,084 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 07:52:58] 2025-06-04 05:52:41,098 | INFO     | sufficient remaining disk space (368877502464 B)
[2025-06-04 07:52:58] 2025-06-04 05:52:41,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:52:58] 2025-06-04 05:52:41,098 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:52:58] 2025-06-04 05:52:41,098 | INFO     | update_server=False
[2025-06-04 07:52:58] 2025-06-04 05:52:41,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:52:58] 2025-06-04 05:52:41,098 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:52:58] 2025-06-04 05:52:41,098 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:52:58] 2025-06-04 05:52:41,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:52:58] 2025-06-04 05:52:41,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:52:58] 2025-06-04 05:52:41,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:52:58] 2025-06-04 05:52:41,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:52:58] 2025-06-04 05:52:41,181 | INFO     | all job control threads have been joined
[2025-06-04 07:52:58] 2025-06-04 05:52:41,259 | INFO     | all data control threads have been joined
[2025-06-04 07:52:58] 2025-06-04 05:52:41,333 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:52:58] 2025-06-04 05:52:41,334 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:52:58] 2025-06-04 05:52:41,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:52:58] 2025-06-04 05:52:41,334 | INFO     | will abort loop
[2025-06-04 07:52:58] 2025-06-04 05:52:41,636 | INFO     | all payload control threads have been joined
[2025-06-04 07:52:58] 2025-06-04 05:52:42,104 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:42,104 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:42,187 | INFO     | [job] control thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:42,265 | INFO     | [data] control thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:42,297 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:42,339 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:42,500 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:42,642 | INFO     | [payload] control thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:42,707 | INFO     | [job] validate thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:42,785 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:42,844 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:43,105 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:43,333 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:43,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:52:58] 2025-06-04 05:52:43,532 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:47,397 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:51,775 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:52:58] 2025-06-04 05:52:52,781 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:52:58] 2025-06-04 05:52:53,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140623213467456)>', '<ExcThread(monitor, started 140622723802880)>']
[2025-06-04 07:52:58] 2025-06-04 05:52:53,163 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:52:58] 2025-06-04 05:52:53,163 | INFO     | [monitor] control thread has ended
[2025-06-04 07:52:58] 2025-06-04 05:52:58,161 | INFO     | all workflow threads have been joined
[2025-06-04 07:52:58] 2025-06-04 05:52:58,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:52:58] 2025-06-04 05:52:58,162 | INFO     | traces error code: 0
[2025-06-04 07:52:58] 2025-06-04 05:52:58,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:52:58] 2025-06-04 05:52:58,212 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:52:58] 2025-06-04 05:52:58,214 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:52:58] 2025-06-04 05:52:58,217 [wrapper] pilotpid: 1037426
[2025-06-04 07:52:58] 2025-06-04 05:52:58,220 [wrapper] Pilot exit status: 0
[2025-06-04 07:52:58] 2025-06-04 05:52:58,228 [wrapper] pandaids: 6677786599
[2025-06-04 07:52:58] 2025-06-04 05:52:58,244 [wrapper] cleanup supervisor_pilot 1053294 1037427
[2025-06-04 07:52:58] 2025-06-04 05:52:58,247 [wrapper] Test setup, not cleaning
[2025-06-04 07:52:58] 2025-06-04 05:52:58,249 [wrapper] apfmon messages muted
[2025-06-04 07:52:58] 2025-06-04 05:52:58,252 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:52:58] 2025-06-04 05:52:58,254 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:52:58]  *** Error codes and diagnostics ***
[2025-06-04 07:52:58]     "exeErrorCode": 0,
[2025-06-04 07:52:58]     "exeErrorDiag": "",
[2025-06-04 07:52:58]     "pilotErrorCode": 0,
[2025-06-04 07:52:58]     "pilotErrorDiag": "",
[2025-06-04 07:52:58]  *** Listing of results directory ***
[2025-06-04 07:52:58] total 393216
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:12 queuedata.json
[2025-06-04 07:52:58] -rwx------ 1 boinc boinc     37140 Jun  3 19:14 runpilot2-wrapper.sh
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc       100 Jun  4 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:52:58] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 06:39 run_atlas
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc       105 Jun  4 06:39 job.xml
[2025-06-04 07:52:58] -rw-r--r-- 2 boinc boinc 214255929 Jun  4 06:39 EVNT.45006593._001602.pool.root.1
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc      6930 Jun  4 06:39 init_data.xml
[2025-06-04 07:52:58] drwxrwx--x 2 boinc boinc      4096 Jun  4 06:39 shared
[2025-06-04 07:52:58] -rw-r--r-- 2 boinc boinc    508881 Jun  4 06:39 input.tar.gz
[2025-06-04 07:52:58] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:39 start_atlas.sh
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc         0 Jun  4 06:39 boinc_lockfile
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc      2524 Jun  4 06:39 pandaJob.out
[2025-06-04 07:52:58] -rw------- 1 boinc boinc    986077 Jun  4 06:39 agis_schedconf.cvmfs.json
[2025-06-04 07:52:58] -rw------- 1 boinc boinc   1603667 Jun  4 06:39 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:52:58] drwx------ 4 boinc boinc      4096 Jun  4 06:39 pilot3
[2025-06-04 07:52:58] -rw------- 1 boinc boinc 183266875 Jun  4 07:52 HITS.45006595._039937.pool.root.1
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc       529 Jun  4 07:52 boinc_task_state.xml
[2025-06-04 07:52:58] -rw------- 1 boinc boinc      1017 Jun  4 07:52 memory_monitor_summary.json
[2025-06-04 07:52:58] -rw------- 1 boinc boinc    213247 Jun  4 07:52 log.45006595._039937.job.log.tgz.1
[2025-06-04 07:52:58] -rw------- 1 boinc boinc        95 Jun  4 07:52 pilot_heartbeat.json
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc      8192 Jun  4 07:52 boinc_mmap_file
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc        27 Jun  4 07:52 wrapper_checkpoint.txt
[2025-06-04 07:52:58] -rw------- 1 boinc boinc      7647 Jun  4 07:52 heartbeat.json
[2025-06-04 07:52:58] -rw------- 1 boinc boinc      4738 Jun  4 07:52 pilotlog.txt
[2025-06-04 07:52:58] -rw------- 1 boinc boinc    434023 Jun  4 07:52 log.45006595._039937.job.log.1
[2025-06-04 07:52:58] -rw------- 1 boinc boinc       357 Jun  4 07:52 output.list
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc       620 Jun  4 07:52 runtime_log
[2025-06-04 07:52:58] -rw------- 1 boinc boinc    665600 Jun  4 07:52 result.tar.gz
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc      8738 Jun  4 07:52 runtime_log.err
[2025-06-04 07:52:58] -rw------- 1 boinc boinc       659 Jun  4 07:52 rgMMDmFOkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOGlKDm3wwfhm.diag
[2025-06-04 07:52:58] -rw-r--r-- 1 boinc boinc     21813 Jun  4 07:52 stderr.txt
[2025-06-04 07:52:58] HITS file was successfully produced:
[2025-06-04 07:52:58] -rw------- 1 boinc boinc 183266875 Jun  4 07:52 shared/HITS.pool.root.1
[2025-06-04 07:52:58]  *** Contents of shared directory: ***
[2025-06-04 07:52:58] total 389384
[2025-06-04 07:52:58] -rw-r--r-- 2 boinc boinc 214255929 Jun  4 06:39 ATLAS.root_0
[2025-06-04 07:52:58] -rw-r--r-- 2 boinc boinc    508881 Jun  4 06:39 input.tar.gz
[2025-06-04 07:52:58] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:39 start_atlas.sh
[2025-06-04 07:52:58] -rw------- 1 boinc boinc 183266875 Jun  4 07:52 HITS.pool.root.1
[2025-06-04 07:52:58] -rw------- 1 boinc boinc    665600 Jun  4 07:52 result.tar.gz
07:53:00 (1033784): run_atlas exited; CPU time 12553.957779
07:53:00 (1033784): called boinc_finish(0)

</stderr_txt>
]]>

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