Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-07 15:41:12 (10244): Detected: vboxwrapper 26206
2025-06-07 15:41:12 (10244): Detected: BOINC client v8.0.2
2025-06-07 15:41:15 (10244): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-06-07 15:41:15 (10244): Successfully copied 'init_data.xml' to the shared directory.
2025-06-07 15:41:16 (10244): Create VM. (boinc_7d4e5333a8bf52f5, slot#1)
2025-06-07 15:41:16 (10244): Setting Memory Size for VM. (4400MB)
2025-06-07 15:41:16 (10244): Setting CPU Count for VM. (4)
2025-06-07 15:41:17 (10244): Setting Chipset Options for VM.
2025-06-07 15:41:17 (10244): Setting Graphics Controller Options for VM.
2025-06-07 15:41:17 (10244): Setting Boot Options for VM.
2025-06-07 15:41:18 (10244): Setting Network Configuration for NAT.
2025-06-07 15:41:18 (10244): Enabling VM Network Access.
2025-06-07 15:41:18 (10244): Disabling USB Support for VM.
2025-06-07 15:41:19 (10244): Disabling COM Port Support for VM.
2025-06-07 15:41:19 (10244): Disabling LPT Port Support for VM.
2025-06-07 15:41:19 (10244): Disabling Audio Support for VM.
2025-06-07 15:41:20 (10244): Disabling Clipboard Support for VM.
2025-06-07 15:41:20 (10244): Disabling Drag and Drop Support for VM.
2025-06-07 15:41:20 (10244): Adding storage controller(s) to VM.
2025-06-07 15:41:20 (10244): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-07 15:41:23 (10244): Adding VirtualBox Guest Additions to VM.
2025-06-07 15:41:24 (10244): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-07 15:41:24 (10244): forwarding host port 56241 to guest port 80
2025-06-07 15:41:25 (10244): Enabling remote desktop for VM.
2025-06-07 15:41:25 (10244): Required extension pack not installed, remote desktop not enabled.
2025-06-07 15:41:25 (10244): Enabling shared directory for VM.
2025-06-07 15:41:26 (10244): Starting VM using VBoxManage interface. (boinc_7d4e5333a8bf52f5, slot#1)
2025-06-07 15:41:49 (10244): Successfully started VM. (PID = '6472')
2025-06-07 15:41:49 (10244): Reporting VM Process ID to BOINC.
2025-06-07 15:41:49 (10244): Guest Log: BIOS: VirtualBox 7.0.6
2025-06-07 15:41:49 (10244): Guest Log: CPUID EDX: 0x178bfbff
2025-06-07 15:41:49 (10244): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-07 15:41:50 (10244): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-07 15:41:50 (10244): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-07 15:41:50 (10244): Detected: Web Application Enabled (http://localhost:56241)
2025-06-07 15:41:50 (10244): Preference change detected
2025-06-07 15:41:50 (10244): Setting CPU throttle for VM. (100%)
2025-06-07 15:41:50 (10244): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-07 15:41:52 (10244): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-07 15:41:52 (10244): Guest Log: BIOS: Booting from Hard Disk...
2025-06-07 15:41:59 (10244): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-07 15:41:59 (10244): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-07 15:41:59 (10244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-07 15:42:19 (10244): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-07 15:42:19 (10244): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-07 15:42:56 (10244): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-07 15:42:56 (10244): Guest Log: 00:00:00.000458 main     Log opened 2025-06-07T15:42:53.687648000Z
2025-06-07 15:42:56 (10244): Guest Log: 00:00:00.000883 main     OS Product: Linux
2025-06-07 15:42:56 (10244): Guest Log: 00:00:00.001006 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-07 15:42:56 (10244): Guest Log: 00:00:00.001053 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-07 15:42:56 (10244): Guest Log: 00:00:00.001093 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-07 15:42:56 (10244): Guest Log: 00:00:00.001095 main     Process ID: 1316
2025-06-07 15:42:56 (10244): Guest Log: 00:00:00.001096 main     Package type: LINUX_64BITS_GENERIC
2025-06-07 15:42:56 (10244): Guest Log: 00:00:00.002409 main     5.2.32 r132073 started. Verbose level = 0
2025-06-07 15:42:57 (10244): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-07 15:42:57 (10244): Guest Log: [INFO] Mounting shared directory
2025-06-07 15:42:57 (10244): Guest Log: [INFO] Checking for init_data.xml
2025-06-07 15:43:03 (10244): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-07 15:43:03 (10244): Guest Log: [INFO] Detected branch: prod
2025-06-07 15:43:03 (10244): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-07 15:43:03 (10244): Guest Log: Copying input files
2025-06-07 15:43:06 (10244): Guest Log: 00:00:10.007071 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 716 631 000ns (GuestNow=1 749 303 785 976 791 000 ns GuestLast=1 749 310 973 693 422 000 ns fSetTimeLastLoop=true )
2025-06-07 15:43:09 (10244): Guest Log: Copied input files into RunAtlas.
2025-06-07 15:43:09 (10244): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-07 15:43:09 (10244): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-07 15:43:09 (10244): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-07 15:43:09 (10244): Guest Log: Further information can be found at the LHC@home message board.
2025-06-07 15:43:22 (10244): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-07 15:43:22 (10244): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-07 15:43:22 (10244): Guest Log: 2.6.3.0 1593 0 32188 146900 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-07 15:43:26 (10244): Guest Log: copied the webapp to /var/www
2025-06-07 15:43:26 (10244): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-07 15:43:26 (10244): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-07 15:43:26 (10244): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-07 15:43:26 (10244): Guest Log:  *** Starting ATLAS job. (PandaID=6677783232 taskID=45006595) ***
2025-06-07 17:27:39 (10244): Status Report: Elapsed Time: '6008.956251'
2025-06-07 17:27:39 (10244): Status Report: CPU Time: '21119.000000'
2025-06-07 19:06:53 (10244): Guest Log:  *** Job finished ***
2025-06-07 19:06:53 (10244): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:42,185 | INFO     | [data] copytool_out thread has finished
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:42,635 | INFO     | [job] queue monitor thread has finished
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:43,013 | INFO     | [data] queue_monitor thread has finished
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:44,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629947598656)>', '<ExcThread(monitor, started 140629208184576)>']
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:45,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:45,888 | INFO     | [monitor] control thread has ended
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:49,949 | INFO     | all workflow threads have been joined
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:49,950 | INFO     | end of generic workflow (traces error code: 0)
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:49,950 | INFO     | traces error code: 0
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:49,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:50,432 [wrapper] ==== pilot stdout END ====
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:50,459 [wrapper] ==== wrapper stdout RESUME ====
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:50,472 [wrapper] pilotpid: 5917
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:50,486 [wrapper] Pilot exit status: 0
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:50,718 [wrapper] pandaids: 6677783232
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:50,793 [wrapper] cleanup supervisor_pilot  9667 5918
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:50,800 [wrapper] Test setup, not cleaning
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:50,831 [wrapper] apfmon messages muted
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:50,838 [wrapper] ==== wrapper stdout END ====
2025-06-07 19:06:53 (10244): Guest Log: 2025-06-07 17:06:50,883 [wrapper] ==== wrapper stderr END ====
2025-06-07 19:06:53 (10244): Guest Log:  *** Error codes and diagnostics ***
2025-06-07 19:06:53 (10244): Guest Log:     "exeErrorCode": 0,
2025-06-07 19:06:53 (10244): Guest Log:     "exeErrorDiag": "",
2025-06-07 19:06:53 (10244): Guest Log:     "pilotErrorCode": 0,
2025-06-07 19:06:53 (10244): Guest Log:     "pilotErrorDiag": "",
2025-06-07 19:06:53 (10244): Guest Log:  *** Listing of results directory ***
2025-06-07 19:06:53 (10244): Guest Log: total 177160
2025-06-07 19:06:53 (10244): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 16:42 pilot3.tar.gz
2025-06-07 19:06:53 (10244): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 16:50 queuedata.json
2025-06-07 19:06:53 (10244): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 16:50 runpilot2-wrapper.sh
2025-06-07 19:06:53 (10244): Guest Log: -rwxr-xr-x. 1 atlas atlas      9500 Jun  7 13:43 init_data.xml
2025-06-07 19:06:53 (10244): Guest Log: -rwxr-xr-x. 1 atlas atlas    508883 Jun  7 13:43 input.tar.gz
2025-06-07 19:06:53 (10244): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  7 13:43 start_atlas.sh
2025-06-07 19:06:53 (10244): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  7 13:43 EVNT.45006593._001572.pool.root.1 -> /data/./ATLAS.root_0
2025-06-07 19:06:53 (10244): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  7 13:43 pandaJob.out
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas    985740 Jun  7 13:44 agis_schedconf.cvmfs.json
2025-06-07 19:06:53 (10244): Guest Log: drwx------. 4 atlas atlas      4096 Jun  7 13:45 pilot3
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas 175008251 Jun  7 17:05 HITS.45006595._039196.pool.root.1
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas        95 Jun  7 17:05 pilot_heartbeat.json
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas      1032 Jun  7 17:06 memory_monitor_summary.json
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  7 17:06 agis_ddmendpoints.agis.ALL.json
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas    306971 Jun  7 17:06 log.45006595._039196.job.log.tgz.1
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas      7726 Jun  7 17:06 heartbeat.json
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  7 17:06 pilotlog.txt
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas   1013970 Jun  7 17:06 log.45006595._039196.job.log.1
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas       357 Jun  7 17:06 output.list
2025-06-07 19:06:53 (10244): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  7 17:06 runtime_log
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas   1341440 Jun  7 17:06 result.tar.gz
2025-06-07 19:06:53 (10244): Guest Log: -rw-r--r--. 1 atlas atlas      8590 Jun  7 17:06 runtime_log.err
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas       656 Jun  7 17:06 2mDNDmK1jg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmw9kKDmgkUFin.diag
2025-06-07 19:06:53 (10244): Guest Log: Looking for outputfile HITS.45006595._039196.pool.root.1
2025-06-07 19:06:53 (10244): Guest Log: HITS file was successfully produced
2025-06-07 19:06:53 (10244): Guest Log: -rw-------. 1 atlas atlas 175008251 Jun  7 17:05 /home/atlas/RunAtlas/HITS.45006595._039196.pool.root.1
2025-06-07 19:06:58 (10244): Guest Log: Successfully finished the ATLAS job!
2025-06-07 19:06:58 (10244): Guest Log: Copying the results back to the shared directory!
2025-06-07 19:06:58 (10244): Guest Log:  *** Contents of shared directory: ***
2025-06-07 19:06:59 (10244): Guest Log: total 381388
2025-06-07 19:06:59 (10244): Guest Log: -rwxrwxrwx. 1 root root 213644932 Jun  7 13:41 ATLAS.root_0
2025-06-07 19:06:59 (10244): Guest Log: -rwxrwxrwx. 1 root root 175008251 Jun  7 17:06 HITS.pool.root.1
2025-06-07 19:06:59 (10244): Guest Log: -rwxrwxrwx. 1 root root      9500 Jun  7 13:41 init_data.xml
2025-06-07 19:06:59 (10244): Guest Log: -rwxrwxrwx. 1 root root    508883 Jun  3 20:29 input.tar.gz
2025-06-07 19:06:59 (10244): Guest Log: -rwxrwxrwx. 1 root root   1341440 Jun  7 17:06 result.tar.gz
2025-06-07 19:06:59 (10244): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  3 20:29 start_atlas.sh
2025-06-07 19:06:59 (10244): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-07 19:06:59 (10244): VM Completion File Detected.
2025-06-07 19:06:59 (10244): Powering off VM.
2025-06-07 19:07:03 (10244): Successfully stopped VM.
2025-06-07 19:07:03 (10244): Deregistering VM. (boinc_7d4e5333a8bf52f5, slot#1)
2025-06-07 19:07:03 (10244): Removing network bandwidth throttle group from VM.
2025-06-07 19:07:03 (10244): Removing VM from VirtualBox.
19:07:09 (10244): called boinc_finish(0)

</stderr_txt>
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