Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:41:46 (23236): wrapper (7.7.26015): starting
07:41:46 (23236): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 07:41:46] Arguments: --nthreads 8
[2025-06-04 07:41:46] Threads: 8
[2025-06-04 07:41:46] Checking for CVMFS
[2025-06-04 07:41:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 07:41:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 07:41:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 07:41:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 07:41:50] 2.11.2.0 896 32789 89508 146769 1 69 23685508 25165824 3906 130560 0 16431939 99.788 19580916 2375 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 07:41:50] CVMFS is ok
[2025-06-04 07:41:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 07:41:50] Checking for apptainer binary...
[2025-06-04 07:41:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 07:41:50] Running /usr/bin/apptainer --version
[2025-06-04 07:41:50] apptainer version 1.3.2-1.el7
[2025-06-04 07:41:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 07:52:15] cg-vwn277.simple-grid.lan
[2025-06-04 07:52:15] apptainer works
[2025-06-04 07:52:15] Set ATHENA_PROC_NUMBER=8
[2025-06-04 07:52:15] Set ATHENA_CORE_NUMBER=8
[2025-06-04 07:52:15] Starting ATLAS job with PandaID=6677786695
[2025-06-04 07:52:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:21:35]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:21:35] 2025-06-04 09:57:34,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:21:35] 2025-06-04 09:57:34,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:21:35] 2025-06-04 09:57:34,542 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:21:35] 2025-06-04 09:57:34,543 | INFO     | sum of square deviations: 3772712597.5
[2025-06-04 12:21:35] 2025-06-04 09:57:34,545 | INFO     | sum of deviations: 80956832437.49998
[2025-06-04 12:21:35] 2025-06-04 09:57:34,545 | INFO     | mean x: 1749023955.5
[2025-06-04 12:21:35] 2025-06-04 09:57:34,545 | INFO     | mean y: 2423818.3521739133
[2025-06-04 12:21:35] 2025-06-04 09:57:34,546 | INFO     | -- intersect: -37529043431.078804
[2025-06-04 12:21:35] 2025-06-04 09:57:34,546 | INFO     | intersect: -37529043431.078804
[2025-06-04 12:21:35] 2025-06-04 09:57:34,546 | INFO     | chi2: 5.548640546288446
[2025-06-04 12:21:35] 2025-06-04 09:57:34,547 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,548 | INFO     | sum of deviations: 94002684332.0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,549 | INFO     | mean x: 1749023803.0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,549 | INFO     | mean y: 2431912.7955555557
[2025-06-04 12:21:35] 2025-06-04 09:57:34,549 | INFO     | -- intersect: -46547449168.568016
[2025-06-04 12:21:35] 2025-06-04 09:57:34,549 | INFO     | intersect: -46547449168.568016
[2025-06-04 12:21:35] 2025-06-04 09:57:34,549 | INFO     | chi2: 4.816322621614931
[2025-06-04 12:21:35] 2025-06-04 09:57:34,549 | INFO     | current chi2=4.816322621614931 (change=13.19815040394664 %)
[2025-06-04 12:21:35] 2025-06-04 09:57:34,550 | INFO     | right removable region: 224
[2025-06-04 12:21:35] 2025-06-04 09:57:34,550 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,552 | INFO     | sum of deviations: 6014769579.999994
[2025-06-04 12:21:35] 2025-06-04 09:57:34,552 | INFO     | mean x: 1749024108.0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,552 | INFO     | mean y: 2471226.5822222224
[2025-06-04 12:21:35] 2025-06-04 09:57:34,552 | INFO     | -- intersect: -2976027307.745565
[2025-06-04 12:21:35] 2025-06-04 09:57:34,552 | INFO     | intersect: -2976027307.745565
[2025-06-04 12:21:35] 2025-06-04 09:57:34,554 | INFO     | chi2: 1.327961329853104
[2025-06-04 12:21:35] 2025-06-04 09:57:34,554 | INFO     | current chi2=1.327961329853104 (change=76.06690650124392 %)
[2025-06-04 12:21:35] 2025-06-04 09:57:34,554 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,556 | INFO     | sum of deviations: -16085591999.500002
[2025-06-04 12:21:35] 2025-06-04 09:57:34,556 | INFO     | mean x: 1749024260.5
[2025-06-04 12:21:35] 2025-06-04 09:57:34,556 | INFO     | mean y: 2485748.9954545456
[2025-06-04 12:21:35] 2025-06-04 09:57:34,557 | INFO     | -- intersect: 8523580395.025976
[2025-06-04 12:21:35] 2025-06-04 09:57:34,557 | INFO     | intersect: 8523580395.025976
[2025-06-04 12:21:35] 2025-06-04 09:57:34,557 | INFO     | chi2: 0.8212427745821724
[2025-06-04 12:21:35] 2025-06-04 09:57:34,557 | INFO     | current chi2=0.8212427745821724 (change=38.157628831479876 %)
[2025-06-04 12:21:35] 2025-06-04 09:57:34,558 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,559 | INFO     | sum of deviations: -17996747467.0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,560 | INFO     | mean x: 1749024413.0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,560 | INFO     | mean y: 2487045.8046511626
[2025-06-04 12:21:35] 2025-06-04 09:57:34,560 | INFO     | -- intersect: 10216713582.788557
[2025-06-04 12:21:35] 2025-06-04 09:57:34,560 | INFO     | intersect: 10216713582.788557
[2025-06-04 12:21:35] 2025-06-04 09:57:34,560 | INFO     | chi2: 0.8055740716631679
[2025-06-04 12:21:35] 2025-06-04 09:57:34,561 | INFO     | current chi2=0.8055740716631679 (change=1.9079258173049272 %)
[2025-06-04 12:21:35] 2025-06-04 09:57:34,561 | INFO     | left removable region: 30
[2025-06-04 12:21:35] 2025-06-04 09:57:34,561 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 12:21:35] 2025-06-04 09:57:34,563 | INFO     | sum of deviations: -49951466.49999499
[2025-06-04 12:21:35] 2025-06-04 09:57:34,563 | INFO     | mean x: 1749024687.5
[2025-06-04 12:21:35] 2025-06-04 09:57:34,563 | INFO     | mean y: 2494186.8402061854
[2025-06-04 12:21:35] 2025-06-04 09:57:34,563 | INFO     | -- intersect: 41083949.569343604
[2025-06-04 12:21:35] 2025-06-04 09:57:34,563 | INFO     | intersect: 41083949.569343604
[2025-06-04 12:21:35] 2025-06-04 09:57:34,563 | INFO     | chi2: 0.010734972619181472
[2025-06-04 12:21:35] 2025-06-04 09:57:34,564 | INFO     | -- intersect: 41083949.569343604
[2025-06-04 12:21:35] 2025-06-04 09:57:34,564 | INFO     | current memory leak: -0.02 B/s (using 194 data points, chi2=0.01)
[2025-06-04 12:21:35] 2025-06-04 09:57:34,565 | INFO     | ..............................
[2025-06-04 12:21:35] 2025-06-04 09:57:34,565 | INFO     | . Timing measurements:
[2025-06-04 12:21:35] 2025-06-04 09:57:34,565 | INFO     | . get job = 0 s
[2025-06-04 12:21:35] 2025-06-04 09:57:34,565 | INFO     | . initial setup = 10 s
[2025-06-04 12:21:35] 2025-06-04 09:57:34,565 | INFO     | . payload setup = 140 s
[2025-06-04 12:21:35] 2025-06-04 09:57:34,565 | INFO     | . stage-in = 0 s
[2025-06-04 12:21:35] 2025-06-04 09:57:34,565 | INFO     | . payload execution = 14136 s
[2025-06-04 12:21:35] 2025-06-04 09:57:34,565 | INFO     | . stage-out = 3 s
[2025-06-04 12:21:35] 2025-06-04 09:57:34,566 | INFO     | . log creation = 0 s
[2025-06-04 12:21:35] 2025-06-04 09:57:34,566 | INFO     | ..............................
[2025-06-04 12:21:35] 2025-06-04 09:57:34,705 | INFO     | 
[2025-06-04 12:21:35] 2025-06-04 09:57:34,705 | INFO     | job summary report
[2025-06-04 12:21:35] 2025-06-04 09:57:34,705 | INFO     | --------------------------------------------------
[2025-06-04 12:21:35] 2025-06-04 09:57:34,705 | INFO     | PanDA job id: 6677786695
[2025-06-04 12:21:35] 2025-06-04 09:57:34,705 | INFO     | task id: 45006595
[2025-06-04 12:21:35] 2025-06-04 09:57:34,705 | INFO     | errors: (none)
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | pilot state: finished 
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | transexitcode: 0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | exeerrorcode: 0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | exeerrordiag: 
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | exitcode: 0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | exitmsg: OK
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | cpuconsumptiontime: 51587 s
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | nevents: 400
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | neventsw: 0
[2025-06-04 12:21:35] 2025-06-04 09:57:34,706 | INFO     | pid: 11526
[2025-06-04 12:21:35] 2025-06-04 09:57:34,707 | INFO     | pgrp: 11526
[2025-06-04 12:21:35] 2025-06-04 09:57:34,707 | INFO     | corecount: 8
[2025-06-04 12:21:35] 2025-06-04 09:57:34,707 | INFO     | event service: False
[2025-06-04 12:21:35] 2025-06-04 09:57:34,707 | INFO     | sizes: {0: 2404354, 1: 2405039, 2: 2405238, 13: 2405238, 24: 2405294, 34: 2405322, 45: 2405478, 56: 2405506, 67: 2405534, 77: 2405562, 88: 2405618, 92: 2406132, 99
[2025-06-04 12:21:35] 2025-06-04 09:57:34,707 | INFO     | --------------------------------------------------
[2025-06-04 12:21:35] 2025-06-04 09:57:34,707 | INFO     | 
[2025-06-04 12:21:35] 2025-06-04 09:57:34,707 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 12:21:35] 2025-06-04 09:57:35,255 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,257 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:21:35] 2025-06-04 09:57:35,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:21:35] 2025-06-04 09:57:35,257 | INFO     | job 6677786695 has completed (purged errors)
[2025-06-04 12:21:35] 2025-06-04 09:57:35,257 | INFO     | overall cleanup function is called
[2025-06-04 12:21:35] 2025-06-04 09:57:36,267 | INFO     | --- collectZombieJob: --- 10, [11526]
[2025-06-04 12:21:35] 2025-06-04 09:57:36,267 | INFO     | zombie collector waiting for pid 11526
[2025-06-04 12:21:35] 2025-06-04 09:57:36,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:21:35] 2025-06-04 09:57:36,268 | INFO     | collected zombie processes
[2025-06-04 12:21:35] 2025-06-04 09:57:36,268 | INFO     | will attempt to kill all subprocesses of pid=11526
[2025-06-04 12:21:35] 2025-06-04 09:57:36,394 | INFO     | process IDs to be killed: [11526] (in reverse order)
[2025-06-04 12:21:35] 2025-06-04 09:57:36,458 | INFO     | 14560s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 12:21:35] 2025-06-04 09:57:37,073 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:21:35] 2025-06-04 09:57:37,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:21:35] 2025-06-04 09:57:37,077 | INFO     | did not find any defunct processes belonging to 11526
[2025-06-04 12:21:35] 2025-06-04 09:57:37,080 | INFO     | did not find any defunct processes belonging to 11526
[2025-06-04 12:21:35] 2025-06-04 09:57:37,081 | INFO     | ready for new job
[2025-06-04 12:21:35] 2025-06-04 09:57:37,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:21:35] 2025-06-04 09:57:37,083 | INFO     | **************************************
[2025-06-04 12:21:35] 2025-06-04 09:57:37,083 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:21:35] 2025-06-04 09:57:37,083 | INFO     | **************************************
[2025-06-04 12:21:35] 2025-06-04 09:57:37,083 | INFO     | 
[2025-06-04 12:21:35] 2025-06-04 09:57:37,084 | INFO     | pilot is running in a VM
[2025-06-04 12:21:35] 2025-06-04 09:57:37,084 | INFO     | architecture information:
[2025-06-04 12:21:35] 2025-06-04 09:57:37,103 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:21:35] 2025-06-04 09:57:37,407 | INFO     | cat /etc/os-release:
[2025-06-04 12:21:35] NAME="CentOS Linux"
[2025-06-04 12:21:35] VERSION="7 (Core)"
[2025-06-04 12:21:35] ID="centos"
[2025-06-04 12:21:35] ID_LIKE="rhel fedora"
[2025-06-04 12:21:35] VERSION_ID="7"
[2025-06-04 12:21:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:21:35] ANSI_COLOR="0;31"
[2025-06-04 12:21:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:21:35] HOME_URL="https://www.centos.org/"
[2025-06-04 12:21:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:21:35] 
[2025-06-04 12:21:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:21:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:21:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:21:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:21:35] 
[2025-06-04 12:21:35] 2025-06-04 09:57:37,407 | INFO     | **************************************
[2025-06-04 12:21:35] 2025-06-04 09:57:37,910 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 12:21:35] 2025-06-04 09:57:38,211 | INFO     | sufficient remaining disk space (496762880000 B)
[2025-06-04 12:21:35] 2025-06-04 09:57:38,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:21:35] 2025-06-04 09:57:38,212 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:21:35] 2025-06-04 09:57:38,212 | INFO     | update_server=False
[2025-06-04 12:21:35] 2025-06-04 09:57:38,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:21:35] 2025-06-04 09:57:38,212 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:21:35] 2025-06-04 09:57:38,212 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:21:35] 2025-06-04 09:57:38,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:21:35] 2025-06-04 09:57:38,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:21:35] 2025-06-04 09:57:38,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:21:35] 2025-06-04 09:57:38,442 | INFO     | all job control threads have been joined
[2025-06-04 12:21:35] 2025-06-04 09:57:38,592 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 12:21:35] 2025-06-04 09:57:38,592 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 12:21:35] 2025-06-04 09:57:38,592 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:21:35] 2025-06-04 09:57:38,593 | INFO     | will abort loop
[2025-06-04 12:21:35] 2025-06-04 09:57:38,628 | INFO     | all data control threads have been joined
[2025-06-04 12:21:35] 2025-06-04 09:57:39,218 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:39,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:21:35] 2025-06-04 09:57:39,448 | INFO     | [job] control thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:39,452 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:39,457 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:39,566 | INFO     | all payload control threads have been joined
[2025-06-04 12:21:35] 2025-06-04 09:57:39,598 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:39,634 | INFO     | [data] control thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:39,639 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:39,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:21:35] 2025-06-04 09:57:39,923 | INFO     | [job] validate thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:40,204 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:40,220 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:40,240 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:40,508 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:40,572 | INFO     | [payload] control thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:40,662 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:40,726 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:43,252 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:21:35] 2025-06-04 09:57:43,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139672191846208)>', '<ExcThread(monitor, started 139671522764544)>']
[2025-06-04 12:21:35] 2025-06-04 09:57:44,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:21:35] 2025-06-04 09:57:44,248 | INFO     | [monitor] control thread has ended
[2025-06-04 12:21:35] 2025-06-04 09:57:48,818 | INFO     | all workflow threads have been joined
[2025-06-04 12:21:35] 2025-06-04 09:57:48,818 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:21:35] 2025-06-04 09:57:48,819 | INFO     | traces error code: 0
[2025-06-04 12:21:35] 2025-06-04 09:57:48,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:21:35] 2025-06-04 09:57:49,118 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:21:35] 2025-06-04 09:57:49,171 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:21:35] 2025-06-04 09:57:49,232 [wrapper] pilotpid: 4885
[2025-06-04 12:21:35] 2025-06-04 09:57:49,300 [wrapper] Pilot exit status: 0
[2025-06-04 12:21:35] 2025-06-04 09:57:49,667 [wrapper] pandaids: 6677786695
[2025-06-04 12:21:35] 2025-06-04 09:57:50,572 [wrapper] cleanup supervisor_pilot 21390 4886
[2025-06-04 12:21:35] 2025-06-04 09:57:50,622 [wrapper] Test setup, not cleaning
[2025-06-04 12:21:35] 2025-06-04 09:57:50,714 [wrapper] apfmon messages muted
[2025-06-04 12:21:35] 2025-06-04 09:57:50,764 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:21:35] 2025-06-04 09:57:50,812 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:21:35]  *** Error codes and diagnostics ***
[2025-06-04 12:21:35]     "exeErrorCode": 0,
[2025-06-04 12:21:35]     "exeErrorDiag": "",
[2025-06-04 12:21:35]     "pilotErrorCode": 0,
[2025-06-04 12:21:35]     "pilotErrorDiag": "",
[2025-06-04 12:21:35]  *** Listing of results directory ***
[2025-06-04 12:21:35] total 396680
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:15 queuedata.json
[2025-06-04 12:21:35] -rwx------. 1 boinc boinc     37140 Jun  3 19:16 runpilot2-wrapper.sh
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc       100 Jun  4 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:21:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 07:41 run_atlas
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc       105 Jun  4 07:41 job.xml
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc      6390 Jun  4 07:41 init_data.xml
[2025-06-04 12:21:35] -rw-r--r--. 2 boinc boinc 216067505 Jun  4 07:41 EVNT.45006593._001605.pool.root.1
[2025-06-04 12:21:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:41 start_atlas.sh
[2025-06-04 12:21:35] drwxrwx--x. 2 boinc boinc        68 Jun  4 07:41 shared
[2025-06-04 12:21:35] -rw-r--r--. 2 boinc boinc    508880 Jun  4 07:41 input.tar.gz
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc         0 Jun  4 07:41 boinc_lockfile
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc      2524 Jun  4 07:52 pandaJob.out
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc    986745 Jun  4 07:54 agis_schedconf.cvmfs.json
[2025-06-04 12:21:35] drwx------. 4 boinc boinc      4096 Jun  4 07:55 pilot3
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc 183074855 Jun  4 11:54 HITS.45006595._040012.pool.root.1
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc       531 Jun  4 11:55 boinc_task_state.xml
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc      1029 Jun  4 11:56 memory_monitor_summary.json
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc   1603667 Jun  4 11:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc    375822 Jun  4 11:56 log.45006595._040012.job.log.tgz.1
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc        95 Jun  4 11:56 pilot_heartbeat.json
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc      7686 Jun  4 11:57 heartbeat.json
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc      4725 Jun  4 11:57 pilotlog.txt
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc   1242113 Jun  4 11:57 log.45006595._040012.job.log.1
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc       357 Jun  4 11:57 output.list
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc       620 Jun  4 11:57 runtime_log
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc   1638400 Jun  4 11:57 result.tar.gz
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc      8659 Jun  4 11:57 runtime_log.err
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc       657 Jun  4 11:57 aJELDmNQkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfHlKDmxtTUYn.diag
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc      8192 Jun  4 12:21 boinc_mmap_file
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc        28 Jun  4 12:21 wrapper_checkpoint.txt
[2025-06-04 12:21:35] -rw-r--r--. 1 boinc boinc     20578 Jun  4 12:21 stderr.txt
[2025-06-04 12:21:35] HITS file was successfully produced:
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc 183074855 Jun  4 11:54 shared/HITS.pool.root.1
[2025-06-04 12:21:35]  *** Contents of shared directory: ***
[2025-06-04 12:21:35] total 391908
[2025-06-04 12:21:35] -rw-r--r--. 2 boinc boinc 216067505 Jun  4 07:41 ATLAS.root_0
[2025-06-04 12:21:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 07:41 start_atlas.sh
[2025-06-04 12:21:35] -rw-r--r--. 2 boinc boinc    508880 Jun  4 07:41 input.tar.gz
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc 183074855 Jun  4 11:54 HITS.pool.root.1
[2025-06-04 12:21:35] -rw-------. 1 boinc boinc   1638400 Jun  4 11:57 result.tar.gz
12:21:37 (23236): run_atlas exited; CPU time 51785.536071
12:21:37 (23236): called boinc_finish(0)

</stderr_txt>
]]>

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