Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:07:26 (10346): wrapper (7.7.26015): starting
16:07:26 (10346): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:07:26] Arguments: --nthreads 8
[2025-06-03 16:07:26] Threads: 8
[2025-06-03 16:07:26] Checking for CVMFS
[2025-06-03 16:07:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:07:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:07:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:07:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:07:27] 2.11.2.0 39063 11856 292308 146754 1 462 15555555 18432000 12190 130560 1 102009217 99.219 150525511 48490 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 16:07:27] CVMFS is ok
[2025-06-03 16:07:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:07:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 16:07:27] Further information can be found at the LHC@home message board.
[2025-06-03 16:07:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:07:27] Checking for apptainer binary...
[2025-06-03 16:07:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:07:27] Running /usr/bin/apptainer --version
[2025-06-03 16:07:27] apptainer version 1.3.2-1.el7
[2025-06-03 16:07:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:07:27] c-212-9.aglt2.org
[2025-06-03 16:07:27] apptainer works
[2025-06-03 16:07:27] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:07:27] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:07:27] Starting ATLAS job with PandaID=6677862471
[2025-06-03 16:07:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:06:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:06:20]  is_altstaged=None
[2025-06-03 17:06:20]  is_tar=False
[2025-06-03 17:06:20]  lfn=log.45006595._040461.job.log.tgz.1
[2025-06-03 17:06:20]  mtime=0
[2025-06-03 17:06:20]  protocol_id=None
[2025-06-03 17:06:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 17:06:20]  replicas=None
[2025-06-03 17:06:20]  scope=mc23_13p6TeV
[2025-06-03 17:06:20]  status=None
[2025-06-03 17:06:20]  status_code=0
[2025-06-03 17:06:20]  storage_token=
[2025-06-03 17:06:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677862471/log.45006595._040461.job.log.tgz.1
[2025-06-03 17:06:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/b5/log.45006595._040461.job.log.tgz.1
[2025-06-03 17:06:20]  workdir=None
[2025-06-03 17:06:20] ]
[2025-06-03 17:06:20] 2025-06-03 21:05:58,884 | INFO     | transferring file log.45006595._040461.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677862471/log.45006595._040461.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 17:06:20] 2025-06-03 21:05:58,884 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677862471/log.45006595._040461.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._040461.job
[2025-06-03 17:06:20] 2025-06-03 21:05:58,902 | INFO     | adding to output.list: log.45006595._040461.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/b5/log.45006595._040461.job.log.tg
[2025-06-03 17:06:20] 2025-06-03 21:05:58,903 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 17:06:20] 2025-06-03 21:05:58,903 | INFO     | summary of transferred files:
[2025-06-03 17:06:20] 2025-06-03 21:05:58,903 | INFO     |  -- lfn=log.45006595._040461.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 17:06:20] 2025-06-03 21:05:58,903 | INFO     | stage-out finished correctly
[2025-06-03 17:06:20] 2025-06-03 21:05:59,233 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 17:06:20] 2025-06-03 21:06:00,035 | INFO     | monitor loop #265: job 0:6677862471 is in state 'finished'
[2025-06-03 17:06:20] 2025-06-03 21:06:00,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:06:20] 2025-06-03 21:06:01,722 | INFO     | job 6677862471 has state=finished
[2025-06-03 17:06:20] 2025-06-03 21:06:01,723 | INFO     | preparing for final server update for job 6677862471 in state='finished'
[2025-06-03 17:06:20] 2025-06-03 21:06:01,723 | INFO     | this job has now completed (state=finished)
[2025-06-03 17:06:20] 2025-06-03 21:06:01,723 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 17:06:20] 2025-06-03 21:06:01,723 | INFO     | log transfer has been attempted: DONE
[2025-06-03 17:06:20] 2025-06-03 21:06:01,723 | INFO     | job 6677862471 has finished - writing final server update
[2025-06-03 17:06:20] 2025-06-03 21:06:01,723 | INFO     | total number of processed events: 400 (read)
[2025-06-03 17:06:20] 2025-06-03 21:06:01,726 | INFO     | executing command: lscpu
[2025-06-03 17:06:20] 2025-06-03 21:06:01,770 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 17:06:20] 2025-06-03 21:06:02,538 | INFO     | monitor loop #266: job 0:6677862471 is in state 'finished'
[2025-06-03 17:06:20] 2025-06-03 21:06:02,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:06:20] 2025-06-03 21:06:04,695 | INFO     | PID=15982 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 17:06:20] 2025-06-03 21:06:04,696 | INFO     | .. there are 18 such processes running
[2025-06-03 17:06:20] 2025-06-03 21:06:04,862 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 17:06:20] 2025-06-03 21:06:04,863 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677862471/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:06:20] 2025-06-03 21:06:04,864 | INFO     | extracted standard info from prmon json
[2025-06-03 17:06:20] 2025-06-03 21:06:04,864 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:06:20] 2025-06-03 21:06:04,864 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:06:20] 2025-06-03 21:06:04,864 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:06:20] 2025-06-03 21:06:04,864 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:06:20] 2025-06-03 21:06:04,866 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:06:20] 2025-06-03 21:06:04,866 | INFO     | sum of square deviations: 38744912.5
[2025-06-03 17:06:20] 2025-06-03 21:06:04,866 | INFO     | sum of deviations: 321306306.5
[2025-06-03 17:06:20] 2025-06-03 21:06:04,866 | INFO     | mean x: 1748983083.5
[2025-06-03 17:06:20] 2025-06-03 21:06:04,866 | INFO     | mean y: 2483901.58
[2025-06-03 17:06:20] 2025-06-03 21:06:04,866 | INFO     | -- intersect: -14501595690.556545
[2025-06-03 17:06:20] 2025-06-03 21:06:04,867 | INFO     | intersect: -14501595690.556545
[2025-06-03 17:06:20] 2025-06-03 21:06:04,867 | INFO     | chi2: 0.0007586947499989467
[2025-06-03 17:06:20] 2025-06-03 21:06:04,867 | INFO     | -- intersect: -14501595690.556545
[2025-06-03 17:06:20] 2025-06-03 21:06:04,867 | INFO     | current memory leak: 8.29 B/s (using 50 data points, chi2=0.00)
[2025-06-03 17:06:20] 2025-06-03 21:06:04,867 | INFO     | ..............................
[2025-06-03 17:06:20] 2025-06-03 21:06:04,867 | INFO     | . Timing measurements:
[2025-06-03 17:06:20] 2025-06-03 21:06:04,867 | INFO     | . get job = 0 s
[2025-06-03 17:06:20] 2025-06-03 21:06:04,867 | INFO     | . initial setup = 2 s
[2025-06-03 17:06:20] 2025-06-03 21:06:04,867 | INFO     | . payload setup = 6 s
[2025-06-03 17:06:20] 2025-06-03 21:06:04,867 | INFO     | . stage-in = 0 s
[2025-06-03 17:06:20] 2025-06-03 21:06:04,868 | INFO     | . payload execution = 3474 s
[2025-06-03 17:06:20] 2025-06-03 21:06:04,868 | INFO     | . stage-out = 0 s
[2025-06-03 17:06:20] 2025-06-03 21:06:04,868 | INFO     | . log creation = 0 s
[2025-06-03 17:06:20] 2025-06-03 21:06:04,868 | INFO     | ..............................
[2025-06-03 17:06:20] 2025-06-03 21:06:05,138 | INFO     | 
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | job summary report
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | --------------------------------------------------
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | PanDA job id: 6677862471
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | task id: 45006595
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | errors: (none)
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | pilot state: finished 
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | transexitcode: 0
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | exeerrorcode: 0
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | exeerrordiag: 
[2025-06-03 17:06:20] 2025-06-03 21:06:05,139 | INFO     | exitcode: 0
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | exitmsg: OK
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | cpuconsumptiontime: 25544 s
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | nevents: 400
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | neventsw: 0
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | pid: 22497
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | pgrp: 22497
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | corecount: 8
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | event service: False
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | sizes: {0: 2405070, 1: 2405184, 5: 2405418, 11: 2405474, 3484: 2431111, 3485: 2431110, 3486: 2440235, 3487: 2440291, 3492: 2440461}
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | --------------------------------------------------
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | 
[2025-06-03 17:06:20] 2025-06-03 21:06:05,140 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 17:06:20] 2025-06-03 21:06:05,156 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,158 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:06:20] 2025-06-03 21:06:05,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:06:20] 2025-06-03 21:06:05,158 | INFO     | job 6677862471 has completed (purged errors)
[2025-06-03 17:06:20] 2025-06-03 21:06:05,158 | INFO     | overall cleanup function is called
[2025-06-03 17:06:20] 2025-06-03 21:06:06,165 | INFO     | --- collectZombieJob: --- 10, [22497]
[2025-06-03 17:06:20] 2025-06-03 21:06:06,166 | INFO     | zombie collector waiting for pid 22497
[2025-06-03 17:06:20] 2025-06-03 21:06:06,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:06:20] 2025-06-03 21:06:06,166 | INFO     | collected zombie processes
[2025-06-03 17:06:20] 2025-06-03 21:06:06,166 | INFO     | will attempt to kill all subprocesses of pid=22497
[2025-06-03 17:06:20] 2025-06-03 21:06:06,426 | INFO     | process IDs to be killed: [22497] (in reverse order)
[2025-06-03 17:06:20] 2025-06-03 21:06:06,513 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:06:20] 2025-06-03 21:06:06,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:06:20] 2025-06-03 21:06:06,522 | INFO     | did not find any defunct processes belonging to 22497
[2025-06-03 17:06:20] 2025-06-03 21:06:06,530 | INFO     | did not find any defunct processes belonging to 22497
[2025-06-03 17:06:20] 2025-06-03 21:06:06,531 | INFO     | ready for new job
[2025-06-03 17:06:20] 2025-06-03 21:06:06,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:06:20] 2025-06-03 21:06:06,532 | INFO     | **************************************
[2025-06-03 17:06:20] 2025-06-03 21:06:06,532 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:06:20] 2025-06-03 21:06:06,532 | INFO     | **************************************
[2025-06-03 17:06:20] 2025-06-03 21:06:06,532 | INFO     | 
[2025-06-03 17:06:20] 2025-06-03 21:06:06,536 | INFO     | architecture information:
[2025-06-03 17:06:20] 2025-06-03 21:06:06,536 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:06:20] 2025-06-03 21:06:06,552 | INFO     | cat /etc/os-release:
[2025-06-03 17:06:20] NAME="CentOS Linux"
[2025-06-03 17:06:20] VERSION="7 (Core)"
[2025-06-03 17:06:20] ID="centos"
[2025-06-03 17:06:20] ID_LIKE="rhel fedora"
[2025-06-03 17:06:20] VERSION_ID="7"
[2025-06-03 17:06:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:06:20] ANSI_COLOR="0;31"
[2025-06-03 17:06:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:06:20] HOME_URL="https://www.centos.org/"
[2025-06-03 17:06:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:06:20] 
[2025-06-03 17:06:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:06:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:06:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:06:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:06:20] 
[2025-06-03 17:06:20] 2025-06-03 21:06:06,552 | INFO     | **************************************
[2025-06-03 17:06:20] 2025-06-03 21:06:07,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 17:06:20] 2025-06-03 21:06:07,077 | INFO     | sufficient remaining disk space (103610843136 B)
[2025-06-03 17:06:20] 2025-06-03 21:06:07,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:06:20] 2025-06-03 21:06:07,078 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:06:20] 2025-06-03 21:06:07,078 | INFO     | update_server=False
[2025-06-03 17:06:20] 2025-06-03 21:06:07,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:06:20] 2025-06-03 21:06:07,078 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:06:20] 2025-06-03 21:06:07,079 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:06:20] 2025-06-03 21:06:07,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:06:20] 2025-06-03 21:06:07,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:06:20] 2025-06-03 21:06:07,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:06:20] 2025-06-03 21:06:07,298 | INFO     | all data control threads have been joined
[2025-06-03 17:06:20] 2025-06-03 21:06:07,437 | INFO     | all payload control threads have been joined
[2025-06-03 17:06:20] 2025-06-03 21:06:07,545 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 17:06:20] 2025-06-03 21:06:07,545 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 17:06:20] 2025-06-03 21:06:07,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:06:20] 2025-06-03 21:06:07,546 | INFO     | will abort loop
[2025-06-03 17:06:20] 2025-06-03 21:06:07,728 | INFO     | all job control threads have been joined
[2025-06-03 17:06:20] 2025-06-03 21:06:08,084 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:08,113 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:08,162 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:08,164 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:08,304 | INFO     | [data] control thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:08,442 | INFO     | [payload] control thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:08,550 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:08,733 | INFO     | [job] control thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:08,788 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:08,829 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:09,085 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:09,122 | INFO     | [job] validate thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:09,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:09,535 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:09,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:06:20] 2025-06-03 21:06:09,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:06:20] 2025-06-03 21:06:10,945 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:13,816 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:06:20] 2025-06-03 21:06:14,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395424290624)>', '<ExcThread(monitor, started 140395124074240)>']
[2025-06-03 17:06:20] 2025-06-03 21:06:15,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:06:20] 2025-06-03 21:06:15,117 | INFO     | [monitor] control thread has ended
[2025-06-03 17:06:20] 2025-06-03 21:06:19,986 | INFO     | all workflow threads have been joined
[2025-06-03 17:06:20] 2025-06-03 21:06:19,986 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:06:20] 2025-06-03 21:06:19,987 | INFO     | traces error code: 0
[2025-06-03 17:06:20] 2025-06-03 21:06:19,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:06:20] 2025-06-03 21:06:20,073 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:06:20] 2025-06-03 21:06:20,075 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:06:20] 2025-06-03 21:06:20,078 [wrapper] pilotpid: 15982
[2025-06-03 17:06:20] 2025-06-03 21:06:20,080 [wrapper] Pilot exit status: 0
[2025-06-03 17:06:20] 2025-06-03 21:06:20,088 [wrapper] pandaids: 6677862471
[2025-06-03 17:06:20] 2025-06-03 21:06:20,151 [wrapper] cleanup supervisor_pilot 62747 15983
[2025-06-03 17:06:20] 2025-06-03 21:06:20,152 [wrapper] Test setup, not cleaning
[2025-06-03 17:06:20] 2025-06-03 21:06:20,154 [wrapper] apfmon messages muted
[2025-06-03 17:06:20] 2025-06-03 21:06:20,156 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:06:20] 2025-06-03 21:06:20,157 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:06:20]  *** Error codes and diagnostics ***
[2025-06-03 17:06:20]     "exeErrorCode": 0,
[2025-06-03 17:06:20]     "exeErrorDiag": "",
[2025-06-03 17:06:20]     "pilotErrorCode": 0,
[2025-06-03 17:06:20]     "pilotErrorDiag": "",
[2025-06-03 17:06:20]  *** Listing of results directory ***
[2025-06-03 17:06:20] total 386684
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 12:58 pilot3.tar.gz
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 13:23 queuedata.json
[2025-06-03 17:06:20] -rwx------ 1 boincer umatlas     37140 Jun  3 13:24 runpilot2-wrapper.sh
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas       100 Jun  3 16:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:06:20] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 16:07 run_atlas
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas       105 Jun  3 16:07 job.xml
[2025-06-03 17:06:20] -rw-r--r-- 2 boincer umatlas 213158755 Jun  3 16:07 EVNT.45006593._001621.pool.root.1
[2025-06-03 17:06:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 16:07 start_atlas.sh
[2025-06-03 17:06:20] drwxrwx--x 2 boincer umatlas      4096 Jun  3 16:07 shared
[2025-06-03 17:06:20] -rw-r--r-- 2 boincer umatlas    508886 Jun  3 16:07 input.tar.gz
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas         0 Jun  3 16:07 boinc_lockfile
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 16:07 pandaJob.out
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas    986893 Jun  3 16:07 agis_schedconf.cvmfs.json
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas   1603667 Jun  3 16:07 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:06:20] drwx------ 4 boincer umatlas      4096 Jun  3 16:07 pilot3
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas      6301 Jun  3 17:02 init_data.xml
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas        95 Jun  3 17:05 pilot_heartbeat.json
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas 177654061 Jun  3 17:05 HITS.45006595._040461.pool.root.1
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas       530 Jun  3 17:05 boinc_task_state.xml
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas      1068 Jun  3 17:05 memory_monitor_summary.json
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas    300908 Jun  3 17:05 log.45006595._040461.job.log.tgz.1
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas      7730 Jun  3 17:06 heartbeat.json
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas        27 Jun  3 17:06 wrapper_checkpoint.txt
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 17:06 boinc_mmap_file
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas      4663 Jun  3 17:06 pilotlog.txt
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas    357679 Jun  3 17:06 log.45006595._040461.job.log.1
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas       357 Jun  3 17:06 output.list
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas       620 Jun  3 17:06 runtime_log
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas    675840 Jun  3 17:06 result.tar.gz
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas      8654 Jun  3 17:06 runtime_log.err
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas       655 Jun  3 17:06 1PoMDmMYkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfMlKDmz427gm.diag
[2025-06-03 17:06:20] -rw-r--r-- 1 boincer umatlas     21479 Jun  3 17:06 stderr.txt
[2025-06-03 17:06:20] HITS file was successfully produced:
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas 177654061 Jun  3 17:05 shared/HITS.pool.root.1
[2025-06-03 17:06:20]  *** Contents of shared directory: ***
[2025-06-03 17:06:20] total 382840
[2025-06-03 17:06:20] -rw-r--r-- 2 boincer umatlas 213158755 Jun  3 16:07 ATLAS.root_0
[2025-06-03 17:06:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 16:07 start_atlas.sh
[2025-06-03 17:06:20] -rw-r--r-- 2 boincer umatlas    508886 Jun  3 16:07 input.tar.gz
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas 177654061 Jun  3 17:05 HITS.pool.root.1
[2025-06-03 17:06:20] -rw------- 1 boincer umatlas    675840 Jun  3 17:06 result.tar.gz
17:06:21 (10346): run_atlas exited; CPU time 25503.125590
17:06:21 (10346): called boinc_finish(0)

</stderr_txt>
]]>

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