Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:00:36 (3703): wrapper (7.7.26015): starting
16:00:36 (3703): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:00:37] Arguments: --nthreads 8
[2025-06-03 16:00:37] Threads: 8
[2025-06-03 16:00:37] Checking for CVMFS
[2025-06-03 16:00:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:00:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:00:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:00:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:00:37] 2.11.2.0 3213 439631 244400 146754 1 56 13904042 20275200 917 130560 0 127432981 99.990 19070484 17994 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 16:00:37] CVMFS is ok
[2025-06-03 16:00:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:00:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 16:00:37] Further information can be found at the LHC@home message board.
[2025-06-03 16:00:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:00:37] Checking for apptainer binary...
[2025-06-03 16:00:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 16:00:37] Running /usr/bin/apptainer --version
[2025-06-03 16:00:37] apptainer version 1.3.2-1.el7
[2025-06-03 16:00:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:00:37] c-205-38.aglt2.org
[2025-06-03 16:00:37] apptainer works
[2025-06-03 16:00:37] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:00:37] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:00:37] Starting ATLAS job with PandaID=6677862469
[2025-06-03 16:00:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:49:05]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:49:05]  filetype=log
[2025-06-03 16:49:05]  guid=d23ac0ac-d6e6-4c07-87aa-fa1f53535146
[2025-06-03 16:49:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 16:49:05]  is_altstaged=None
[2025-06-03 16:49:05]  is_tar=False
[2025-06-03 16:49:05]  lfn=log.45006595._040459.job.log.tgz.1
[2025-06-03 16:49:05]  mtime=0
[2025-06-03 16:49:05]  protocol_id=None
[2025-06-03 16:49:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 16:49:05]  replicas=None
[2025-06-03 16:49:05]  scope=mc23_13p6TeV
[2025-06-03 16:49:05]  status=None
[2025-06-03 16:49:05]  status_code=0
[2025-06-03 16:49:05]  storage_token=
[2025-06-03 16:49:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677862469/log.45006595._040459.job.log.tgz.1
[2025-06-03 16:49:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/0e/log.45006595._040459.job.log.tgz.1
[2025-06-03 16:49:05]  workdir=None
[2025-06-03 16:49:05] ]
[2025-06-03 16:49:05] 2025-06-03 20:48:39,850 | INFO     | transferring file log.45006595._040459.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677862469/log.45006595._040459.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 16:49:05] 2025-06-03 20:48:39,851 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677862469/log.45006595._040459.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._040459.job
[2025-06-03 16:49:05] 2025-06-03 20:48:39,869 | INFO     | adding to output.list: log.45006595._040459.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/0e/log.45006595._040459.job.log.tg
[2025-06-03 16:49:05] 2025-06-03 20:48:39,870 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 16:49:05] 2025-06-03 20:48:39,870 | INFO     | summary of transferred files:
[2025-06-03 16:49:05] 2025-06-03 20:48:39,870 | INFO     |  -- lfn=log.45006595._040459.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 16:49:05] 2025-06-03 20:48:39,870 | INFO     | stage-out finished correctly
[2025-06-03 16:49:05] 2025-06-03 20:48:42,414 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 16:49:05] 2025-06-03 20:48:42,509 | INFO     | job 6677862469 has state=finished
[2025-06-03 16:49:05] 2025-06-03 20:48:42,510 | INFO     | preparing for final server update for job 6677862469 in state='finished'
[2025-06-03 16:49:05] 2025-06-03 20:48:42,510 | INFO     | this job has now completed (state=finished)
[2025-06-03 16:49:05] 2025-06-03 20:48:42,511 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 16:49:05] 2025-06-03 20:48:42,511 | INFO     | log transfer has been attempted: DONE
[2025-06-03 16:49:05] 2025-06-03 20:48:42,511 | INFO     | job 6677862469 has finished - writing final server update
[2025-06-03 16:49:05] 2025-06-03 20:48:42,511 | INFO     | total number of processed events: 400 (read)
[2025-06-03 16:49:05] 2025-06-03 20:48:42,513 | INFO     | executing command: lscpu
[2025-06-03 16:49:05] 2025-06-03 20:48:42,533 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 16:49:05] 2025-06-03 20:48:44,683 | WARNING  | process 13798 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 16:49:05] 2025-06-03 20:48:44,683 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677862469/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:49:05] 2025-06-03 20:48:44,735 | INFO     | number of running child processes to parent process 13798: 1
[2025-06-03 16:49:05] 2025-06-03 20:48:44,736 | INFO     | maximum number of monitored processes: 6
[2025-06-03 16:49:05] 2025-06-03 20:48:45,688 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 16:49:05] 2025-06-03 20:48:45,689 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677862469/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:49:05] 2025-06-03 20:48:45,689 | INFO     | extracted standard info from prmon json
[2025-06-03 16:49:05] 2025-06-03 20:48:45,689 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:49:05] 2025-06-03 20:48:45,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:49:05] 2025-06-03 20:48:45,690 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:49:05] 2025-06-03 20:48:45,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:49:05] 2025-06-03 20:48:45,690 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | sum of square deviations: 19832930.0
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | sum of deviations: -2982821920.0
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | mean x: 1748982359.5
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | mean y: 2609713.2
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | -- intersect: 263045080977.40155
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | intersect: 263045080977.40155
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | chi2: 0.03753854150044519
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | -- intersect: 263045080977.40155
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | current memory leak: -150.40 B/s (using 40 data points, chi2=0.04)
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | ..............................
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | . Timing measurements:
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | . get job = 0 s
[2025-06-03 16:49:05] 2025-06-03 20:48:45,691 | INFO     | . initial setup = 2 s
[2025-06-03 16:49:05] 2025-06-03 20:48:45,692 | INFO     | . payload setup = 3 s
[2025-06-03 16:49:05] 2025-06-03 20:48:45,692 | INFO     | . stage-in = 0 s
[2025-06-03 16:49:05] 2025-06-03 20:48:45,692 | INFO     | . payload execution = 2856 s
[2025-06-03 16:49:05] 2025-06-03 20:48:45,692 | INFO     | . stage-out = 0 s
[2025-06-03 16:49:05] 2025-06-03 20:48:45,692 | INFO     | . log creation = 0 s
[2025-06-03 16:49:05] 2025-06-03 20:48:45,692 | INFO     | ..............................
[2025-06-03 16:49:05] 2025-06-03 20:48:45,737 | INFO     | 
[2025-06-03 16:49:05] 2025-06-03 20:48:45,737 | INFO     | job summary report
[2025-06-03 16:49:05] 2025-06-03 20:48:45,737 | INFO     | --------------------------------------------------
[2025-06-03 16:49:05] 2025-06-03 20:48:45,738 | INFO     | PanDA job id: 6677862469
[2025-06-03 16:49:05] 2025-06-03 20:48:45,738 | INFO     | task id: 45006595
[2025-06-03 16:49:05] 2025-06-03 20:48:45,738 | INFO     | errors: (none)
[2025-06-03 16:49:05] 2025-06-03 20:48:45,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:49:05] 2025-06-03 20:48:45,738 | INFO     | pilot state: finished 
[2025-06-03 16:49:05] 2025-06-03 20:48:45,738 | INFO     | transexitcode: 0
[2025-06-03 16:49:05] 2025-06-03 20:48:45,738 | INFO     | exeerrorcode: 0
[2025-06-03 16:49:05] 2025-06-03 20:48:45,738 | INFO     | exeerrordiag: 
[2025-06-03 16:49:05] 2025-06-03 20:48:45,738 | INFO     | exitcode: 0
[2025-06-03 16:49:05] 2025-06-03 20:48:45,739 | INFO     | exitmsg: OK
[2025-06-03 16:49:05] 2025-06-03 20:48:45,739 | INFO     | cpuconsumptiontime: 20771 s
[2025-06-03 16:49:05] 2025-06-03 20:48:45,739 | INFO     | nevents: 400
[2025-06-03 16:49:05] 2025-06-03 20:48:45,739 | INFO     | neventsw: 0
[2025-06-03 16:49:05] 2025-06-03 20:48:45,739 | INFO     | pid: 13798
[2025-06-03 16:49:05] 2025-06-03 20:48:45,739 | INFO     | pgrp: 13798
[2025-06-03 16:49:05] 2025-06-03 20:48:45,739 | INFO     | corecount: 8
[2025-06-03 16:49:05] 2025-06-03 20:48:45,739 | INFO     | event service: False
[2025-06-03 16:49:05] 2025-06-03 20:48:45,739 | INFO     | sizes: {0: 2405184, 2: 2405390, 11: 2405418, 2861: 2439716, 2864: 2439716, 2867: 2439886}
[2025-06-03 16:49:05] 2025-06-03 20:48:45,740 | INFO     | --------------------------------------------------
[2025-06-03 16:49:05] 2025-06-03 20:48:45,740 | INFO     | 
[2025-06-03 16:49:05] 2025-06-03 20:48:45,740 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 16:49:05] 2025-06-03 20:48:45,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,758 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,758 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:49:05] 2025-06-03 20:48:45,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,760 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:49:05] 2025-06-03 20:48:45,761 | INFO     | job 6677862469 has completed (purged errors)
[2025-06-03 16:49:05] 2025-06-03 20:48:45,761 | INFO     | overall cleanup function is called
[2025-06-03 16:49:05] 2025-06-03 20:48:46,769 | INFO     | --- collectZombieJob: --- 10, [13798]
[2025-06-03 16:49:05] 2025-06-03 20:48:46,769 | INFO     | zombie collector waiting for pid 13798
[2025-06-03 16:49:05] 2025-06-03 20:48:46,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:49:05] 2025-06-03 20:48:46,769 | INFO     | collected zombie processes
[2025-06-03 16:49:05] 2025-06-03 20:48:46,769 | INFO     | will attempt to kill all subprocesses of pid=13798
[2025-06-03 16:49:05] 2025-06-03 20:48:46,874 | INFO     | process IDs to be killed: [13798] (in reverse order)
[2025-06-03 16:49:05] 2025-06-03 20:48:46,920 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:49:05] 2025-06-03 20:48:46,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:49:05] 2025-06-03 20:48:46,923 | INFO     | did not find any defunct processes belonging to 13798
[2025-06-03 16:49:05] 2025-06-03 20:48:46,925 | INFO     | did not find any defunct processes belonging to 13798
[2025-06-03 16:49:05] 2025-06-03 20:48:46,926 | INFO     | ready for new job
[2025-06-03 16:49:05] 2025-06-03 20:48:46,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:49:05] 2025-06-03 20:48:46,928 | INFO     | **************************************
[2025-06-03 16:49:05] 2025-06-03 20:48:46,928 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:49:05] 2025-06-03 20:48:46,928 | INFO     | **************************************
[2025-06-03 16:49:05] 2025-06-03 20:48:46,928 | INFO     | 
[2025-06-03 16:49:05] 2025-06-03 20:48:46,929 | INFO     | architecture information:
[2025-06-03 16:49:05] 2025-06-03 20:48:46,930 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:49:05] 2025-06-03 20:48:46,941 | INFO     | cat /etc/os-release:
[2025-06-03 16:49:05] NAME="CentOS Linux"
[2025-06-03 16:49:05] VERSION="7 (Core)"
[2025-06-03 16:49:05] ID="centos"
[2025-06-03 16:49:05] ID_LIKE="rhel fedora"
[2025-06-03 16:49:05] VERSION_ID="7"
[2025-06-03 16:49:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:49:05] ANSI_COLOR="0;31"
[2025-06-03 16:49:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:49:05] HOME_URL="https://www.centos.org/"
[2025-06-03 16:49:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:49:05] 
[2025-06-03 16:49:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:49:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:49:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:49:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:49:05] 
[2025-06-03 16:49:05] 2025-06-03 20:48:46,942 | INFO     | **************************************
[2025-06-03 16:49:05] 2025-06-03 20:48:47,445 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 16:49:05] 2025-06-03 20:48:47,460 | INFO     | sufficient remaining disk space (32840351744 B)
[2025-06-03 16:49:05] 2025-06-03 20:48:47,461 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:49:05] 2025-06-03 20:48:47,461 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:49:05] 2025-06-03 20:48:47,461 | INFO     | update_server=False
[2025-06-03 16:49:05] 2025-06-03 20:48:47,461 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:49:05] 2025-06-03 20:48:47,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:49:05] 2025-06-03 20:48:47,462 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:49:05] 2025-06-03 20:48:47,463 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:49:05] 2025-06-03 20:48:47,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:49:05] 2025-06-03 20:48:47,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:49:05] 2025-06-03 20:48:47,865 | INFO     | all data control threads have been joined
[2025-06-03 16:49:05] 2025-06-03 20:48:47,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:49:05] 2025-06-03 20:48:48,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:49:05] 2025-06-03 20:48:48,246 | INFO     | aborting loop
[2025-06-03 16:49:05] 2025-06-03 20:48:48,291 | INFO     | all job control threads have been joined
[2025-06-03 16:49:05] 2025-06-03 20:48:48,467 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:48,468 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:48,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:49:05] 2025-06-03 20:48:48,784 | INFO     | all payload control threads have been joined
[2025-06-03 16:49:05] 2025-06-03 20:48:48,870 | INFO     | [data] control thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:48,945 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:49,200 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:49,215 | INFO     | [job] validate thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:49,251 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:49,296 | INFO     | [job] control thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:49,361 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:49,459 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:49,760 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:49,789 | INFO     | [payload] control thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:49,860 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:49,974 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:52,520 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:48:58,480 | INFO     | job.realtimelogging is not enabled
[2025-06-03 16:49:05] 2025-06-03 20:48:59,482 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:49:05] 2025-06-03 20:49:00,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187537770304)>', '<ExcThread(monitor, started 140187111773952)>']
[2025-06-03 16:49:05] 2025-06-03 20:49:00,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:49:05] 2025-06-03 20:49:00,524 | INFO     | [monitor] control thread has ended
[2025-06-03 16:49:05] 2025-06-03 20:49:05,246 | INFO     | all workflow threads have been joined
[2025-06-03 16:49:05] 2025-06-03 20:49:05,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:49:05] 2025-06-03 20:49:05,247 | INFO     | traces error code: 0
[2025-06-03 16:49:05] 2025-06-03 20:49:05,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:49:05] 2025-06-03 20:49:05,338 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:49:05] 2025-06-03 20:49:05,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:49:05] 2025-06-03 20:49:05,345 [wrapper] pilotpid: 7291
[2025-06-03 16:49:05] 2025-06-03 20:49:05,348 [wrapper] Pilot exit status: 0
[2025-06-03 16:49:05] 2025-06-03 20:49:05,359 [wrapper] pandaids: 6677862469
[2025-06-03 16:49:05] 2025-06-03 20:49:05,390 [wrapper] cleanup supervisor_pilot 19611 7292
[2025-06-03 16:49:05] 2025-06-03 20:49:05,393 [wrapper] Test setup, not cleaning
[2025-06-03 16:49:05] 2025-06-03 20:49:05,396 [wrapper] apfmon messages muted
[2025-06-03 16:49:05] 2025-06-03 20:49:05,399 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:49:05] 2025-06-03 20:49:05,402 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:49:05]  *** Error codes and diagnostics ***
[2025-06-03 16:49:05]     "exeErrorCode": 0,
[2025-06-03 16:49:05]     "exeErrorDiag": "",
[2025-06-03 16:49:05]     "pilotErrorCode": 0,
[2025-06-03 16:49:05]     "pilotErrorDiag": "",
[2025-06-03 16:49:05]  *** Listing of results directory ***
[2025-06-03 16:49:05] total 385268
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 12:58 pilot3.tar.gz
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 13:23 queuedata.json
[2025-06-03 16:49:05] -rwx------ 1 boincer umatlas     37140 Jun  3 13:24 runpilot2-wrapper.sh
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas       100 Jun  3 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:49:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 16:00 run_atlas
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas       105 Jun  3 16:00 job.xml
[2025-06-03 16:49:05] -rw-r--r-- 2 boincer umatlas 213158755 Jun  3 16:00 EVNT.45006593._001621.pool.root.1
[2025-06-03 16:49:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 16:00 start_atlas.sh
[2025-06-03 16:49:05] drwxrwx--x 2 boincer umatlas      4096 Jun  3 16:00 shared
[2025-06-03 16:49:05] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 16:00 input.tar.gz
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas         0 Jun  3 16:00 boinc_lockfile
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 16:00 pandaJob.out
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas    986893 Jun  3 16:00 agis_schedconf.cvmfs.json
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas   1603667 Jun  3 16:00 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:49:05] drwx------ 4 boincer umatlas      4096 Jun  3 16:00 pilot3
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas      6051 Jun  3 16:47 init_data.xml
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas        95 Jun  3 16:48 pilot_heartbeat.json
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas       529 Jun  3 16:48 boinc_task_state.xml
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas 176308295 Jun  3 16:48 HITS.45006595._040459.pool.root.1
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas      1045 Jun  3 16:48 memory_monitor_summary.json
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas    292704 Jun  3 16:48 log.45006595._040459.job.log.tgz.1
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas      7741 Jun  3 16:48 heartbeat.json
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas        27 Jun  3 16:48 wrapper_checkpoint.txt
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 16:48 boinc_mmap_file
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas      4548 Jun  3 16:49 pilotlog.txt
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas    308659 Jun  3 16:49 log.45006595._040459.job.log.1
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas       357 Jun  3 16:49 output.list
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas       620 Jun  3 16:49 runtime_log
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas    624640 Jun  3 16:49 result.tar.gz
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 16:49 runtime_log.err
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas       656 Jun  3 16:49 iBnMDmMYkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeMlKDmjozEim.diag
[2025-06-03 16:49:05] -rw-r--r-- 1 boincer umatlas     21150 Jun  3 16:49 stderr.txt
[2025-06-03 16:49:05] HITS file was successfully produced:
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas 176308295 Jun  3 16:48 shared/HITS.pool.root.1
[2025-06-03 16:49:05]  *** Contents of shared directory: ***
[2025-06-03 16:49:05] total 381480
[2025-06-03 16:49:05] -rw-r--r-- 2 boincer umatlas 213158755 Jun  3 16:00 ATLAS.root_0
[2025-06-03 16:49:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 16:00 start_atlas.sh
[2025-06-03 16:49:05] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 16:00 input.tar.gz
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas 176308295 Jun  3 16:48 HITS.pool.root.1
[2025-06-03 16:49:05] -rw------- 1 boincer umatlas    624640 Jun  3 16:49 result.tar.gz
16:49:07 (3703): run_atlas exited; CPU time 20743.048217
16:49:07 (3703): called boinc_finish(0)

</stderr_txt>
]]>

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