Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:57:08 (3384919): wrapper (7.7.26015): starting
05:57:08 (3384919): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 05:57:08] Arguments: --nthreads 4
[2025-06-04 05:57:08] Threads: 4
[2025-06-04 05:57:08] Checking for CVMFS
[2025-06-04 05:57:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:57:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:57:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:57:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:57:08] 2.9.2.0 2635807 1956 91252 146767 3 55 31731767 36864001 0 130560 0 2002848 99.993 516547 51935 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 05:57:08] CVMFS is ok
[2025-06-04 05:57:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 05:57:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 05:57:08] Further information can be found at the LHC@home message board.
[2025-06-04 05:57:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:57:08] Checking for apptainer binary...
[2025-06-04 05:57:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:57:08] Running /usr/bin/apptainer --version
[2025-06-04 05:57:08] apptainer version 1.3.6-6.1
[2025-06-04 05:57:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:57:09] magicA254
[2025-06-04 05:57:09] apptainer works
[2025-06-04 05:57:09] Set ATHENA_PROC_NUMBER=4
[2025-06-04 05:57:09] Set ATHENA_CORE_NUMBER=4
[2025-06-04 05:57:09] Starting ATLAS job with PandaID=6677920861
[2025-06-04 05:57:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:03:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:03:52]  is_altstaged=None
[2025-06-04 07:03:52]  is_tar=False
[2025-06-04 07:03:52]  lfn=log.45006595._042371.job.log.tgz.1
[2025-06-04 07:03:52]  mtime=0
[2025-06-04 07:03:52]  protocol_id=None
[2025-06-04 07:03:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 07:03:52]  replicas=None
[2025-06-04 07:03:52]  scope=mc23_13p6TeV
[2025-06-04 07:03:52]  status=None
[2025-06-04 07:03:52]  status_code=0
[2025-06-04 07:03:52]  storage_token=
[2025-06-04 07:03:52]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677920861/log.45006595._042371.job.log.tgz.1
[2025-06-04 07:03:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/59/log.45006595._042371.job.log.tgz.1
[2025-06-04 07:03:52]  workdir=None
[2025-06-04 07:03:52] ]
[2025-06-04 07:03:52] 2025-06-04 05:03:35,257 | INFO     | transferring file log.45006595._042371.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677920861/log.45006595._042371.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 07:03:52] 2025-06-04 05:03:35,257 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677920861/log.45006595._042371.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0423
[2025-06-04 07:03:52] 2025-06-04 05:03:35,277 | INFO     | adding to output.list: log.45006595._042371.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/59/log.45006595._042371.job.log.tg
[2025-06-04 07:03:52] 2025-06-04 05:03:35,277 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:03:52] 2025-06-04 05:03:35,277 | INFO     | summary of transferred files:
[2025-06-04 07:03:52] 2025-06-04 05:03:35,277 | INFO     |  -- lfn=log.45006595._042371.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:03:52] 2025-06-04 05:03:35,278 | INFO     | stage-out finished correctly
[2025-06-04 07:03:52] 2025-06-04 05:03:35,319 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:03:52] 2025-06-04 05:03:36,595 | INFO     | job 6677920861 has state=finished
[2025-06-04 07:03:52] 2025-06-04 05:03:36,595 | INFO     | preparing for final server update for job 6677920861 in state='finished'
[2025-06-04 07:03:52] 2025-06-04 05:03:36,595 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:03:52] 2025-06-04 05:03:36,595 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:03:52] 2025-06-04 05:03:36,595 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:03:52] 2025-06-04 05:03:36,595 | INFO     | job 6677920861 has finished - writing final server update
[2025-06-04 07:03:52] 2025-06-04 05:03:36,596 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:03:52] 2025-06-04 05:03:36,597 | INFO     | executing command: lscpu
[2025-06-04 07:03:52] 2025-06-04 05:03:36,620 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:03:52] 2025-06-04 05:03:37,928 | INFO     | PID=3388611 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 07:03:52] 2025-06-04 05:03:38,929 | INFO     | 3983s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 07:03:52] 2025-06-04 05:03:40,031 | WARNING  | process 3395211 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:03:52] 2025-06-04 05:03:40,031 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677920861/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:03:52] 2025-06-04 05:03:40,082 | INFO     | number of running child processes to parent process 3395211: 1
[2025-06-04 07:03:52] 2025-06-04 05:03:40,082 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:03:52] 2025-06-04 05:03:40,135 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:03:52] 2025-06-04 05:03:40,136 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677920861/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:03:52] 2025-06-04 05:03:40,136 | INFO     | extracted standard info from prmon json
[2025-06-04 07:03:52] 2025-06-04 05:03:40,136 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:03:52] 2025-06-04 05:03:40,136 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:03:52] 2025-06-04 05:03:40,136 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:03:52] 2025-06-04 05:03:40,136 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:03:52] 2025-06-04 05:03:40,137 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:03:52] 2025-06-04 05:03:40,137 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 07:03:52] 2025-06-04 05:03:40,137 | INFO     | sum of deviations: -3734490241.5
[2025-06-04 07:03:52] 2025-06-04 05:03:40,137 | INFO     | mean x: 1749011504.5
[2025-06-04 07:03:52] 2025-06-04 05:03:40,137 | INFO     | mean y: 2630084.879310345
[2025-06-04 07:03:52] 2025-06-04 05:03:40,137 | INFO     | -- intersect: 107994412730.93336
[2025-06-04 07:03:52] 2025-06-04 05:03:40,137 | INFO     | intersect: 107994412730.93336
[2025-06-04 07:03:52] 2025-06-04 05:03:40,137 | INFO     | chi2: 0.06580762766379522
[2025-06-04 07:03:52] 2025-06-04 05:03:40,137 | INFO     | -- intersect: 107994412730.93336
[2025-06-04 07:03:52] 2025-06-04 05:03:40,137 | INFO     | current memory leak: -61.74 B/s (using 58 data points, chi2=0.07)
[2025-06-04 07:03:52] 2025-06-04 05:03:40,138 | INFO     | ..............................
[2025-06-04 07:03:52] 2025-06-04 05:03:40,138 | INFO     | . Timing measurements:
[2025-06-04 07:03:52] 2025-06-04 05:03:40,138 | INFO     | . get job = 0 s
[2025-06-04 07:03:52] 2025-06-04 05:03:40,138 | INFO     | . initial setup = 1 s
[2025-06-04 07:03:52] 2025-06-04 05:03:40,138 | INFO     | . payload setup = 5 s
[2025-06-04 07:03:52] 2025-06-04 05:03:40,138 | INFO     | . stage-in = 0 s
[2025-06-04 07:03:52] 2025-06-04 05:03:40,138 | INFO     | . payload execution = 3954 s
[2025-06-04 07:03:52] 2025-06-04 05:03:40,138 | INFO     | . stage-out = 0 s
[2025-06-04 07:03:52] 2025-06-04 05:03:40,138 | INFO     | . log creation = 0 s
[2025-06-04 07:03:52] 2025-06-04 05:03:40,138 | INFO     | ..............................
[2025-06-04 07:03:52] 2025-06-04 05:03:40,558 | INFO     | 
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | job summary report
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | --------------------------------------------------
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | PanDA job id: 6677920861
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | task id: 45006595
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | errors: (none)
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | pilot state: finished 
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | transexitcode: 0
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | exeerrorcode: 0
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | exeerrordiag: 
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | exitcode: 0
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | exitmsg: OK
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | cpuconsumptiontime: 14944 s
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | nevents: 400
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | neventsw: 0
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | pid: 3395211
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | pgrp: 3395211
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | corecount: 4
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | event service: False
[2025-06-04 07:03:52] 2025-06-04 05:03:40,559 | INFO     | sizes: {0: 2405015, 1: 2405214, 4: 2405420, 11: 2405448, 3962: 2431299, 3963: 2431298, 3964: 2440485, 3969: 2440599}
[2025-06-04 07:03:52] 2025-06-04 05:03:40,560 | INFO     | --------------------------------------------------
[2025-06-04 07:03:52] 2025-06-04 05:03:40,560 | INFO     | 
[2025-06-04 07:03:52] 2025-06-04 05:03:40,560 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,582 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:03:52] 2025-06-04 05:03:40,583 | INFO     | job 6677920861 has completed (purged errors)
[2025-06-04 07:03:52] 2025-06-04 05:03:40,583 | INFO     | overall cleanup function is called
[2025-06-04 07:03:52] 2025-06-04 05:03:41,589 | INFO     | --- collectZombieJob: --- 10, [3395211]
[2025-06-04 07:03:52] 2025-06-04 05:03:41,590 | INFO     | zombie collector waiting for pid 3395211
[2025-06-04 07:03:52] 2025-06-04 05:03:41,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:03:52] 2025-06-04 05:03:41,590 | INFO     | collected zombie processes
[2025-06-04 07:03:52] 2025-06-04 05:03:41,590 | INFO     | will attempt to kill all subprocesses of pid=3395211
[2025-06-04 07:03:52] 2025-06-04 05:03:41,634 | INFO     | process IDs to be killed: [3395211] (in reverse order)
[2025-06-04 07:03:52] 2025-06-04 05:03:41,669 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:03:52] 2025-06-04 05:03:41,669 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:03:52] 2025-06-04 05:03:41,671 | INFO     | did not find any defunct processes belonging to 3395211
[2025-06-04 07:03:52] 2025-06-04 05:03:41,672 | INFO     | did not find any defunct processes belonging to 3395211
[2025-06-04 07:03:52] 2025-06-04 05:03:41,672 | INFO     | ready for new job
[2025-06-04 07:03:52] 2025-06-04 05:03:41,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:03:52] 2025-06-04 05:03:41,673 | INFO     | **************************************
[2025-06-04 07:03:52] 2025-06-04 05:03:41,673 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:03:52] 2025-06-04 05:03:41,673 | INFO     | **************************************
[2025-06-04 07:03:52] 2025-06-04 05:03:41,673 | INFO     | 
[2025-06-04 07:03:52] 2025-06-04 05:03:41,674 | INFO     | architecture information:
[2025-06-04 07:03:52] 2025-06-04 05:03:41,674 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:03:52] 2025-06-04 05:03:41,689 | INFO     | cat /etc/os-release:
[2025-06-04 07:03:52] NAME="CentOS Linux"
[2025-06-04 07:03:52] VERSION="7 (Core)"
[2025-06-04 07:03:52] ID="centos"
[2025-06-04 07:03:52] ID_LIKE="rhel fedora"
[2025-06-04 07:03:52] VERSION_ID="7"
[2025-06-04 07:03:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:03:52] ANSI_COLOR="0;31"
[2025-06-04 07:03:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:03:52] HOME_URL="https://www.centos.org/"
[2025-06-04 07:03:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:03:52] 
[2025-06-04 07:03:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:03:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:03:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:03:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:03:52] 
[2025-06-04 07:03:52] 2025-06-04 05:03:41,689 | INFO     | **************************************
[2025-06-04 07:03:52] 2025-06-04 05:03:42,192 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 07:03:52] 2025-06-04 05:03:42,210 | INFO     | sufficient remaining disk space (323705896960 B)
[2025-06-04 07:03:52] 2025-06-04 05:03:42,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:03:52] 2025-06-04 05:03:42,210 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:03:52] 2025-06-04 05:03:42,210 | INFO     | update_server=False
[2025-06-04 07:03:52] 2025-06-04 05:03:42,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:03:52] 2025-06-04 05:03:42,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:03:52] 2025-06-04 05:03:42,210 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:03:52] 2025-06-04 05:03:42,211 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:03:52] 2025-06-04 05:03:42,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:03:52] 2025-06-04 05:03:42,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:03:52] 2025-06-04 05:03:42,586 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:03:52] 2025-06-04 05:03:42,586 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:03:52] 2025-06-04 05:03:42,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:03:52] 2025-06-04 05:03:42,586 | INFO     | will abort loop
[2025-06-04 07:03:52] 2025-06-04 05:03:43,134 | INFO     | all payload control threads have been joined
[2025-06-04 07:03:52] 2025-06-04 05:03:43,216 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:43,235 | INFO     | all data control threads have been joined
[2025-06-04 07:03:52] 2025-06-04 05:03:43,241 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:43,283 | INFO     | all job control threads have been joined
[2025-06-04 07:03:52] 2025-06-04 05:03:43,325 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:43,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:03:52] 2025-06-04 05:03:43,382 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:43,592 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:43,605 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:43,930 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:43,994 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:44,140 | INFO     | [payload] control thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:44,240 | INFO     | [data] control thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:44,288 | INFO     | [job] control thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:44,666 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:44,693 | INFO     | [job] validate thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:45,190 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:03:52] 2025-06-04 05:03:45,337 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:46,196 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:46,217 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:03:52] 2025-06-04 05:03:47,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489052370752)>', '<ExcThread(monitor, started 140487910487808)>']
[2025-06-04 07:03:52] 2025-06-04 05:03:47,238 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:03:52] 2025-06-04 05:03:47,238 | INFO     | [monitor] control thread has ended
[2025-06-04 07:03:52] 2025-06-04 05:03:52,224 | INFO     | all workflow threads have been joined
[2025-06-04 07:03:52] 2025-06-04 05:03:52,224 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:03:52] 2025-06-04 05:03:52,225 | INFO     | traces error code: 0
[2025-06-04 07:03:52] 2025-06-04 05:03:52,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:03:52] 2025-06-04 05:03:52,303 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:03:52] 2025-06-04 05:03:52,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:03:52] 2025-06-04 05:03:52,312 [wrapper] pilotpid: 3388611
[2025-06-04 07:03:52] 2025-06-04 05:03:52,316 [wrapper] Pilot exit status: 0
[2025-06-04 07:03:52] 2025-06-04 05:03:52,328 [wrapper] pandaids: 6677920861
[2025-06-04 07:03:52] 2025-06-04 05:03:52,352 [wrapper] cleanup supervisor_pilot 3404836 3388612
[2025-06-04 07:03:52] 2025-06-04 05:03:52,356 [wrapper] Test setup, not cleaning
[2025-06-04 07:03:52] 2025-06-04 05:03:52,360 [wrapper] apfmon messages muted
[2025-06-04 07:03:52] 2025-06-04 05:03:52,364 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:03:52] 2025-06-04 05:03:52,368 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:03:52]  *** Error codes and diagnostics ***
[2025-06-04 07:03:52]     "exeErrorCode": 0,
[2025-06-04 07:03:52]     "exeErrorDiag": "",
[2025-06-04 07:03:52]     "pilotErrorCode": 0,
[2025-06-04 07:03:52]     "pilotErrorDiag": "",
[2025-06-04 07:03:52]  *** Listing of results directory ***
[2025-06-04 07:03:52] total 392224
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:32 queuedata.json
[2025-06-04 07:03:52] -rwx------ 1 boinc boinc     37140 Jun  3 20:33 runpilot2-wrapper.sh
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc       100 Jun  4 05:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:03:52] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 05:57 run_atlas
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc       105 Jun  4 05:57 job.xml
[2025-06-04 07:03:52] -rw-r--r-- 2 boinc boinc 215010117 Jun  4 05:57 EVNT.45006593._001699.pool.root.1
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc      6862 Jun  4 05:57 init_data.xml
[2025-06-04 07:03:52] drwxrwx--x 2 boinc boinc      4096 Jun  4 05:57 shared
[2025-06-04 07:03:52] -rw-r--r-- 2 boinc boinc    508880 Jun  4 05:57 input.tar.gz
[2025-06-04 07:03:52] -rw-r--r-- 2 boinc boinc     15093 Jun  4 05:57 start_atlas.sh
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc         0 Jun  4 05:57 boinc_lockfile
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc      2524 Jun  4 05:57 pandaJob.out
[2025-06-04 07:03:52] -rw------- 1 boinc boinc    986077 Jun  4 05:57 agis_schedconf.cvmfs.json
[2025-06-04 07:03:52] -rw------- 1 boinc boinc   1603667 Jun  4 05:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:03:52] drwx------ 4 boinc boinc      4096 Jun  4 05:57 pilot3
[2025-06-04 07:03:52] -rw------- 1 boinc boinc 181492398 Jun  4 07:03 HITS.45006595._042371.pool.root.1
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc      8192 Jun  4 07:03 boinc_mmap_file
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc        27 Jun  4 07:03 wrapper_checkpoint.txt
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc       529 Jun  4 07:03 boinc_task_state.xml
[2025-06-04 07:03:52] -rw------- 1 boinc boinc      1024 Jun  4 07:03 memory_monitor_summary.json
[2025-06-04 07:03:52] -rw------- 1 boinc boinc    252386 Jun  4 07:03 log.45006595._042371.job.log.tgz.1
[2025-06-04 07:03:52] -rw------- 1 boinc boinc        95 Jun  4 07:03 pilot_heartbeat.json
[2025-06-04 07:03:52] -rw------- 1 boinc boinc      7667 Jun  4 07:03 heartbeat.json
[2025-06-04 07:03:52] -rw------- 1 boinc boinc      4666 Jun  4 07:03 pilotlog.txt
[2025-06-04 07:03:52] -rw------- 1 boinc boinc    397962 Jun  4 07:03 log.45006595._042371.job.log.1
[2025-06-04 07:03:52] -rw------- 1 boinc boinc       357 Jun  4 07:03 output.list
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc       620 Jun  4 07:03 runtime_log
[2025-06-04 07:03:52] -rw------- 1 boinc boinc    665600 Jun  4 07:03 result.tar.gz
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc      8748 Jun  4 07:03 runtime_log.err
[2025-06-04 07:03:52] -rw------- 1 boinc boinc       661 Jun  4 07:03 5StKDmadlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3ilKDmifTCcm.diag
[2025-06-04 07:03:52] -rw-r--r-- 1 boinc boinc     21530 Jun  4 07:03 stderr.txt
[2025-06-04 07:03:52] HITS file was successfully produced:
[2025-06-04 07:03:52] -rw------- 1 boinc boinc 181492398 Jun  4 07:03 shared/HITS.pool.root.1
[2025-06-04 07:03:52]  *** Contents of shared directory: ***
[2025-06-04 07:03:52] total 388388
[2025-06-04 07:03:52] -rw-r--r-- 2 boinc boinc 215010117 Jun  4 05:57 ATLAS.root_0
[2025-06-04 07:03:52] -rw-r--r-- 2 boinc boinc    508880 Jun  4 05:57 input.tar.gz
[2025-06-04 07:03:52] -rw-r--r-- 2 boinc boinc     15093 Jun  4 05:57 start_atlas.sh
[2025-06-04 07:03:52] -rw------- 1 boinc boinc 181492398 Jun  4 07:03 HITS.pool.root.1
[2025-06-04 07:03:52] -rw------- 1 boinc boinc    665600 Jun  4 07:03 result.tar.gz
07:03:53 (3384919): run_atlas exited; CPU time 14947.849857
07:03:53 (3384919): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN