Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:58:43 (141008): wrapper (7.7.26015): starting
12:58:43 (141008): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 12:58:43] Arguments: --nthreads 12
[2025-06-03 12:58:43] Threads: 12
[2025-06-03 12:58:43] Checking for CVMFS
[2025-06-03 12:58:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:58:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:58:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:58:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:58:45] 2.11.5.0 1158142 22665 246484 146754 1 494 31898787 45568001 14036 130560 0 191251144 99.786 123817442 25586 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 12:58:45] CVMFS is ok
[2025-06-03 12:58:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:58:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:58:45] Further information can be found at the LHC@home message board.
[2025-06-03 12:58:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:58:45] Checking for apptainer binary...
[2025-06-03 12:58:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:58:45] Running /usr/bin/apptainer --version
[2025-06-03 12:58:46] apptainer version 1.4.0-1.el9
[2025-06-03 12:58:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:58:47] wns0116.triumf.lcg
[2025-06-03 12:58:47] apptainer works
[2025-06-03 12:58:47] Set ATHENA_PROC_NUMBER=12
[2025-06-03 12:58:47] Set ATHENA_CORE_NUMBER=12
[2025-06-03 12:58:47] Starting ATLAS job with PandaID=6677920656
[2025-06-03 12:58:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:03:40]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:03:40] 2025-06-03 20:03:21,062 | WARNING  | wrong length of table data, x=[1748980827.0], y=[1842.0] (must be same and length>=4)
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | ..............................
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . Timing measurements:
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . get job = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . initial setup = 3 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . payload setup = 19 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . stage-in = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . payload execution = 54 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . stage-out = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . log creation = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | ..............................
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677920656/pilotlog.txt
[2025-06-03 13:03:40] 2025-06-03 20:03:21,141 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 13:03:40] - Log from pilotlog.txt -
[2025-06-03 13:03:40] 2025-06-03 20:03:21,038 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:03:40] 2025-06-03 20:03:21,038 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677920656/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | INFO     | extracted standard info from prmon json
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:03:40] 2025-06-03 20:03:21,062 | WARNING  | wrong length of table data, x=[1748980827.0], y=[1842.0] (must be same and length>=4)
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | ..............................
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . Timing measurements:
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . get job = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . initial setup = 3 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . payload setup = 19 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . stage-in = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . payload execution = 54 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . stage-out = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . log creation = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | ..............................
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677920656/pilotlog.txt
[2025-06-03 13:03:40] 2025-06-03 20:03:21,142 | WARNING  | 
[2025-06-03 13:03:40] [begin log extracts]
[2025-06-03 13:03:40] - Log from pilotlog.txt -
[2025-06-03 13:03:40] 2025-06-03 20:03:21,038 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:03:40] 2025-06-03 20:03:21,038 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677920656/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | INFO     | extracted standard info from prmon json
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:03:40] 2025-06-03 20:03:21,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:03:40] 2025-06-03 20:03:21,062 | WARNING  | wrong length of table data, x=[1748980827.0], y=[1842.0] (must be same and length>=4)
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | ..............................
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . Timing measurements:
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . get job = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . initial setup = 3 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . payload setup = 19 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . stage-in = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . payload execution = 54 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . stage-out = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | . log creation = 0 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | ..............................
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:03:40] 2025-06-03 20:03:21,063 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677920656/pilotlog.txt
[2025-06-03 13:03:40] [end log extracts]
[2025-06-03 13:03:40] 2025-06-03 20:03:21,142 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 13:03:40] 2025-06-03 20:03:21,143 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | 
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | job summary report
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | --------------------------------------------------
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | PanDA job id: 6677920656
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | task id: 45006595
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 13:00:58,339 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | pilot state: failed 
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | transexitcode: 65
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | exeerrorcode: 65
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 13:03:40] 2025-06-03 20:03:21,950 | INFO     | exitcode: 65
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | cpuconsumptiontime: 20 s
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | nevents: 0
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | neventsw: 0
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | pid: 154571
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | pgrp: 154571
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | corecount: 12
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | event service: False
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | sizes: {0: 2404954, 1: 2405038, 2: 2405237, 3: 2405237, 13: 2405265, 18: 2405527, 24: 2405683, 77: 2428891, 78: 2433126, 80: 2433154, 211: 2433296}
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | --------------------------------------------------
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | 
[2025-06-03 13:03:40] 2025-06-03 20:03:21,951 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 13:03:40] 2025-06-03 20:03:22,061 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,061 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,061 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,061 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,062 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:03:40] 2025-06-03 20:03:22,063 | INFO     | job 6677920656 has completed (purged errors)
[2025-06-03 13:03:40] 2025-06-03 20:03:22,063 | INFO     | overall cleanup function is called
[2025-06-03 13:03:40] 2025-06-03 20:03:22,101 | INFO     | PID=148012 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 13:03:40] 2025-06-03 20:03:22,103 | INFO     | .. there are 21 such processes running
[2025-06-03 13:03:40] 2025-06-03 20:03:23,070 | INFO     | --- collectZombieJob: --- 10, [154571]
[2025-06-03 13:03:40] 2025-06-03 20:03:23,070 | INFO     | zombie collector waiting for pid 154571
[2025-06-03 13:03:40] 2025-06-03 20:03:23,070 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:03:40] 2025-06-03 20:03:23,070 | INFO     | collected zombie processes
[2025-06-03 13:03:40] 2025-06-03 20:03:23,070 | INFO     | will attempt to kill all subprocesses of pid=154571
[2025-06-03 13:03:40] 2025-06-03 20:03:23,116 | INFO     | 255s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 13:03:40] 2025-06-03 20:03:23,478 | INFO     | process IDs to be killed: [154571] (in reverse order)
[2025-06-03 13:03:40] 2025-06-03 20:03:23,825 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:03:40] 2025-06-03 20:03:23,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:03:40] 2025-06-03 20:03:23,845 | INFO     | did not find any defunct processes belonging to 154571
[2025-06-03 13:03:40] 2025-06-03 20:03:23,878 | INFO     | did not find any defunct processes belonging to 154571
[2025-06-03 13:03:40] 2025-06-03 20:03:23,878 | INFO     | ready for new job
[2025-06-03 13:03:40] 2025-06-03 20:03:23,879 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:03:40] 2025-06-03 20:03:23,880 | INFO     | **************************************
[2025-06-03 13:03:40] 2025-06-03 20:03:23,880 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:03:40] 2025-06-03 20:03:23,880 | INFO     | **************************************
[2025-06-03 13:03:40] 2025-06-03 20:03:23,880 | INFO     | 
[2025-06-03 13:03:40] 2025-06-03 20:03:23,887 | INFO     | architecture information:
[2025-06-03 13:03:40] 2025-06-03 20:03:23,887 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:03:40] 2025-06-03 20:03:23,955 | INFO     | cat /etc/os-release:
[2025-06-03 13:03:40] NAME="CentOS Linux"
[2025-06-03 13:03:40] VERSION="7 (Core)"
[2025-06-03 13:03:40] ID="centos"
[2025-06-03 13:03:40] ID_LIKE="rhel fedora"
[2025-06-03 13:03:40] VERSION_ID="7"
[2025-06-03 13:03:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:03:40] ANSI_COLOR="0;31"
[2025-06-03 13:03:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:03:40] HOME_URL="https://www.centos.org/"
[2025-06-03 13:03:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:03:40] 
[2025-06-03 13:03:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:03:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:03:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:03:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:03:40] 
[2025-06-03 13:03:40] 2025-06-03 20:03:23,956 | INFO     | **************************************
[2025-06-03 13:03:40] 2025-06-03 20:03:24,462 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 13:03:40] 2025-06-03 20:03:24,652 | INFO     | sufficient remaining disk space (2063866003456 B)
[2025-06-03 13:03:40] 2025-06-03 20:03:24,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:03:40] 2025-06-03 20:03:24,653 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:03:40] 2025-06-03 20:03:24,653 | INFO     | update_server=False
[2025-06-03 13:03:40] 2025-06-03 20:03:24,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:03:40] 2025-06-03 20:03:24,653 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 13:03:40] 2025-06-03 20:03:24,654 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:03:40] 2025-06-03 20:03:24,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:03:40] 2025-06-03 20:03:24,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:03:40] 2025-06-03 20:03:24,693 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 13:03:40] 2025-06-03 20:03:24,693 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 13:03:40] 2025-06-03 20:03:24,693 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:03:40] 2025-06-03 20:03:24,693 | INFO     | will abort loop
[2025-06-03 13:03:40] 2025-06-03 20:03:24,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:03:40] 2025-06-03 20:03:25,418 | INFO     | all payload control threads have been joined
[2025-06-03 13:03:40] 2025-06-03 20:03:25,661 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:25,699 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:25,743 | INFO     | all data control threads have been joined
[2025-06-03 13:03:40] 2025-06-03 20:03:25,769 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:25,832 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:25,938 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:26,124 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:26,365 | INFO     | all job control threads have been joined
[2025-06-03 13:03:40] 2025-06-03 20:03:26,424 | INFO     | [payload] control thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:26,502 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:26,579 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:26,594 | INFO     | [job] validate thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:26,720 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:26,749 | INFO     | [data] control thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:26,945 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:26,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:03:40] 2025-06-03 20:03:27,371 | INFO     | [job] control thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:27,971 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:28,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:03:40] 2025-06-03 20:03:32,048 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:03:40] 2025-06-03 20:03:33,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989660899136)>', '<ExcThread(monitor, started 139988679255808)>']
[2025-06-03 13:03:40] 2025-06-03 20:03:34,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:03:40] 2025-06-03 20:03:34,714 | INFO     | [monitor] control thread has ended
[2025-06-03 13:03:40] 2025-06-03 20:03:38,899 | INFO     | all workflow threads have been joined
[2025-06-03 13:03:40] 2025-06-03 20:03:38,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:03:40] 2025-06-03 20:03:38,899 | INFO     | traces error code: 0
[2025-06-03 13:03:40] 2025-06-03 20:03:38,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:03:40] 2025-06-03 20:03:39,112 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:03:40] 2025-06-03 20:03:39,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:03:40] 2025-06-03 20:03:39,179 [wrapper] pilotpid: 148012
[2025-06-03 13:03:40] 2025-06-03 20:03:39,192 [wrapper] Pilot exit status: 0
[2025-06-03 13:03:40] 2025-06-03 20:03:39,315 [wrapper] pandaids: 6677920656
[2025-06-03 13:03:40] 2025-06-03 20:03:39,765 [wrapper] cleanup supervisor_pilot  148018 148013
[2025-06-03 13:03:40] 2025-06-03 20:03:39,793 [wrapper] Test setup, not cleaning
[2025-06-03 13:03:40] 2025-06-03 20:03:39,816 [wrapper] apfmon messages muted
[2025-06-03 13:03:40] 2025-06-03 20:03:39,828 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:03:40] 2025-06-03 20:03:39,852 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:03:40]  *** Error codes and diagnostics ***
[2025-06-03 13:03:40]     "exeErrorCode": 65,
[2025-06-03 13:03:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 13:03:40]     "pilotErrorCode": 1305,
[2025-06-03 13:03:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 13:03:40]  *** Listing of results directory ***
[2025-06-03 13:03:40] total 212368
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc    495897 Jun  3 10:46 pilot3.tar.gz
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc      5111 Jun  3 11:30 queuedata.json
[2025-06-03 13:03:40] -rwx------. 1 boinc boinc     37140 Jun  3 11:30 runpilot2-wrapper.sh
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc       100 Jun  3 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:03:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 12:58 run_atlas
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc       105 Jun  3 12:58 job.xml
[2025-06-03 13:03:40] -rw-r--r--. 2 boinc boinc 213426457 Jun  3 12:58 EVNT.45006593._001693.pool.root.1
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc      6597 Jun  3 12:58 init_data.xml
[2025-06-03 13:03:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:58 start_atlas.sh
[2025-06-03 13:03:40] drwxrwx--x. 2 boinc boinc      4096 Jun  3 12:58 shared
[2025-06-03 13:03:40] -rw-r--r--. 2 boinc boinc    508875 Jun  3 12:58 input.tar.gz
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc         0 Jun  3 12:58 boinc_lockfile
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc      2525 Jun  3 12:58 pandaJob.out
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc    986893 Jun  3 12:59 agis_schedconf.cvmfs.json
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc   1603667 Jun  3 12:59 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:03:40] drwx------. 4 boinc boinc      4096 Jun  3 12:59 pilot3
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc       524 Jun  3 13:00 boinc_task_state.xml
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc       989 Jun  3 13:01 memory_monitor_summary.json
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc     21395 Jun  3 13:01 log.45006595._042208.job.log.tgz.1
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc        95 Jun  3 13:03 pilot_heartbeat.json
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc      8324 Jun  3 13:03 heartbeat.json
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc        23 Jun  3 13:03 wrapper_checkpoint.txt
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:03 boinc_mmap_file
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc      4661 Jun  3 13:03 pilotlog.txt
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc     79645 Jun  3 13:03 log.45006595._042208.job.log.1
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc       188 Jun  3 13:03 output.list
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc       620 Jun  3 13:03 runtime_log
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc    122880 Jun  3 13:03 result.tar.gz
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc      8484 Jun  3 13:03 runtime_log.err
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc       645 Jun  3 13:03 iE4KDmUalg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeglKDmeeINPm.diag
[2025-06-03 13:03:40] -rw-r--r--. 1 boinc boinc     21837 Jun  3 13:03 stderr.txt
[2025-06-03 13:03:40] No HITS result produced
[2025-06-03 13:03:40]  *** Contents of shared directory: ***
[2025-06-03 13:03:40] total 209064
[2025-06-03 13:03:40] -rw-r--r--. 2 boinc boinc 213426457 Jun  3 12:58 ATLAS.root_0
[2025-06-03 13:03:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:58 start_atlas.sh
[2025-06-03 13:03:40] -rw-r--r--. 2 boinc boinc    508875 Jun  3 12:58 input.tar.gz
[2025-06-03 13:03:40] -rw-------. 1 boinc boinc    122880 Jun  3 13:03 result.tar.gz
13:03:42 (141008): run_atlas exited; CPU time 28.727000
13:03:42 (141008): called boinc_finish(0)

</stderr_txt>
]]>

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