Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:54:01 (35634): wrapper (7.7.26015): starting
15:54:01 (35634): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:54:01] Arguments: --nthreads 8
[2025-06-03 15:54:01] Threads: 8
[2025-06-03 15:54:01] Checking for CVMFS
[2025-06-03 15:54:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:54:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:54:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:54:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:54:02] 2.11.2.0 5200 27788 289052 146754 2 432 15326442 18432001 13046 130560 0 138903202 99.536 122670263 40460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 15:54:02] CVMFS is ok
[2025-06-03 15:54:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:54:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:54:02] Further information can be found at the LHC@home message board.
[2025-06-03 15:54:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:54:02] Checking for apptainer binary...
[2025-06-03 15:54:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:54:02] Running /usr/bin/apptainer --version
[2025-06-03 15:54:02] apptainer version 1.3.2-1.el7
[2025-06-03 15:54:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:54:07] c-212-5.aglt2.org
[2025-06-03 15:54:07] apptainer works
[2025-06-03 15:54:07] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:54:07] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:54:07] Starting ATLAS job with PandaID=6677676530
[2025-06-03 15:54:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 16:47:05]  *** The last 200 lines of the pilot log: ***
[2025-06-03 16:47:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 16:47:05]  replicas=None
[2025-06-03 16:47:05]  scope=mc23_13p6TeV
[2025-06-03 16:47:05]  status=None
[2025-06-03 16:47:05]  status_code=0
[2025-06-03 16:47:05]  storage_token=
[2025-06-03 16:47:05]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6677676530/log.45006595._036654.job.log.tgz.1
[2025-06-03 16:47:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/81/log.45006595._036654.job.log.tgz.1
[2025-06-03 16:47:05]  workdir=None
[2025-06-03 16:47:05] ]
[2025-06-03 16:47:05] 2025-06-03 20:46:40,312 | INFO     | transferring file log.45006595._036654.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6677676530/log.45006595._036654.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 16:47:05] 2025-06-03 20:46:40,312 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6677676530/log.45006595._036654.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._036654.job
[2025-06-03 16:47:05] 2025-06-03 20:46:40,385 | INFO     | adding to output.list: log.45006595._036654.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/81/log.45006595._036654.job.log.tg
[2025-06-03 16:47:05] 2025-06-03 20:46:40,386 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 16:47:05] 2025-06-03 20:46:40,386 | INFO     | summary of transferred files:
[2025-06-03 16:47:05] 2025-06-03 20:46:40,386 | INFO     |  -- lfn=log.45006595._036654.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 16:47:05] 2025-06-03 20:46:40,387 | INFO     | stage-out finished correctly
[2025-06-03 16:47:05] 2025-06-03 20:46:40,539 | WARNING  | process 79105 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 16:47:05] 2025-06-03 20:46:40,539 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677676530/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:47:05] 2025-06-03 20:46:40,677 | INFO     | number of running child processes to parent process 79105: 1
[2025-06-03 16:47:05] 2025-06-03 20:46:40,678 | INFO     | maximum number of monitored processes: 6
[2025-06-03 16:47:05] 2025-06-03 20:46:42,208 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 16:47:05] 2025-06-03 20:46:42,248 | INFO     | job 6677676530 has state=finished
[2025-06-03 16:47:05] 2025-06-03 20:46:42,248 | INFO     | preparing for final server update for job 6677676530 in state='finished'
[2025-06-03 16:47:05] 2025-06-03 20:46:42,248 | INFO     | this job has now completed (state=finished)
[2025-06-03 16:47:05] 2025-06-03 20:46:42,249 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 16:47:05] 2025-06-03 20:46:42,249 | INFO     | log transfer has been attempted: DONE
[2025-06-03 16:47:05] 2025-06-03 20:46:42,249 | INFO     | job 6677676530 has finished - writing final server update
[2025-06-03 16:47:05] 2025-06-03 20:46:42,249 | INFO     | total number of processed events: 400 (read)
[2025-06-03 16:47:05] 2025-06-03 20:46:42,253 | INFO     | executing command: lscpu
[2025-06-03 16:47:05] 2025-06-03 20:46:42,288 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 16:47:05] 2025-06-03 20:46:42,805 | INFO     | PID=50908 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 16:47:05] 2025-06-03 20:46:42,805 | INFO     | .. there are 18 such processes running
[2025-06-03 16:47:05] 2025-06-03 20:46:43,181 | INFO     | monitor loop #242: job 0:6677676530 is in state 'finished'
[2025-06-03 16:47:05] 2025-06-03 20:46:43,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:47:05] 2025-06-03 20:46:45,684 | INFO     | monitor loop #243: job 0:6677676530 is in state 'finished'
[2025-06-03 16:47:05] 2025-06-03 20:46:45,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 16:47:05] 2025-06-03 20:46:45,836 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 16:47:05] 2025-06-03 20:46:45,837 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677676530/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 16:47:05] 2025-06-03 20:46:45,837 | INFO     | extracted standard info from prmon json
[2025-06-03 16:47:05] 2025-06-03 20:46:45,838 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 16:47:05] 2025-06-03 20:46:45,838 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 16:47:05] 2025-06-03 20:46:45,838 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 16:47:05] 2025-06-03 20:46:45,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 16:47:05] 2025-06-03 20:46:45,838 | INFO     | fitting pss+swap vs Time
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | sum of square deviations: 26400495.0
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | sum of deviations: -2596526701.5
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | mean x: 1748982153.5
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | mean y: 2545428.522727273
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | -- intersect: 172017458861.3853
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | intersect: 172017458861.3853
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | chi2: 0.016743021358039702
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | -- intersect: 172017458861.3853
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | current memory leak: -98.35 B/s (using 44 data points, chi2=0.02)
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | ..............................
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | . Timing measurements:
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | . get job = 0 s
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | . initial setup = 3 s
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | . payload setup = 25 s
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | . stage-in = 0 s
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | . payload execution = 3076 s
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | . stage-out = 0 s
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | . log creation = 0 s
[2025-06-03 16:47:05] 2025-06-03 20:46:45,839 | INFO     | ..............................
[2025-06-03 16:47:05] 2025-06-03 20:46:45,877 | INFO     | 
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | job summary report
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | --------------------------------------------------
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | PanDA job id: 6677676530
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | task id: 45006595
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | errors: (none)
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | pilot state: finished 
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | transexitcode: 0
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | exeerrorcode: 0
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | exeerrordiag: 
[2025-06-03 16:47:05] 2025-06-03 20:46:45,878 | INFO     | exitcode: 0
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | exitmsg: OK
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | cpuconsumptiontime: 21914 s
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | nevents: 400
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | neventsw: 0
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | pid: 79105
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | pgrp: 79105
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | corecount: 8
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | event service: False
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | sizes: {0: 2405182, 10: 2405388, 11: 2405416, 3104: 2430808, 3105: 2430807, 3106: 2439804, 3107: 2439988, 3111: 2440158}
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | --------------------------------------------------
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | 
[2025-06-03 16:47:05] 2025-06-03 20:46:45,879 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 16:47:05] 2025-06-03 20:46:45,897 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,897 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,897 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,897 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | job 6677676530 has completed (purged errors)
[2025-06-03 16:47:05] 2025-06-03 20:46:45,898 | INFO     | overall cleanup function is called
[2025-06-03 16:47:05] 2025-06-03 20:46:46,906 | INFO     | --- collectZombieJob: --- 10, [79105]
[2025-06-03 16:47:05] 2025-06-03 20:46:46,906 | INFO     | zombie collector waiting for pid 79105
[2025-06-03 16:47:05] 2025-06-03 20:46:46,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 16:47:05] 2025-06-03 20:46:46,906 | INFO     | collected zombie processes
[2025-06-03 16:47:05] 2025-06-03 20:46:46,906 | INFO     | will attempt to kill all subprocesses of pid=79105
[2025-06-03 16:47:05] 2025-06-03 20:46:47,047 | INFO     | process IDs to be killed: [79105] (in reverse order)
[2025-06-03 16:47:05] 2025-06-03 20:46:47,140 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 16:47:05] 2025-06-03 20:46:47,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 16:47:05] 2025-06-03 20:46:47,145 | INFO     | did not find any defunct processes belonging to 79105
[2025-06-03 16:47:05] 2025-06-03 20:46:47,149 | INFO     | did not find any defunct processes belonging to 79105
[2025-06-03 16:47:05] 2025-06-03 20:46:47,149 | INFO     | ready for new job
[2025-06-03 16:47:05] 2025-06-03 20:46:47,149 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 16:47:05] 2025-06-03 20:46:47,150 | INFO     | **************************************
[2025-06-03 16:47:05] 2025-06-03 20:46:47,150 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 16:47:05] 2025-06-03 20:46:47,150 | INFO     | **************************************
[2025-06-03 16:47:05] 2025-06-03 20:46:47,150 | INFO     | 
[2025-06-03 16:47:05] 2025-06-03 20:46:47,152 | INFO     | architecture information:
[2025-06-03 16:47:05] 2025-06-03 20:46:47,152 | INFO     | executing command: cat /etc/os-release
[2025-06-03 16:47:05] 2025-06-03 20:46:47,177 | INFO     | cat /etc/os-release:
[2025-06-03 16:47:05] NAME="CentOS Linux"
[2025-06-03 16:47:05] VERSION="7 (Core)"
[2025-06-03 16:47:05] ID="centos"
[2025-06-03 16:47:05] ID_LIKE="rhel fedora"
[2025-06-03 16:47:05] VERSION_ID="7"
[2025-06-03 16:47:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 16:47:05] ANSI_COLOR="0;31"
[2025-06-03 16:47:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 16:47:05] HOME_URL="https://www.centos.org/"
[2025-06-03 16:47:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 16:47:05] 
[2025-06-03 16:47:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 16:47:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 16:47:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 16:47:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 16:47:05] 
[2025-06-03 16:47:05] 2025-06-03 20:46:47,177 | INFO     | **************************************
[2025-06-03 16:47:05] 2025-06-03 20:46:47,680 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 16:47:05] 2025-06-03 20:46:47,709 | INFO     | sufficient remaining disk space (103756595200 B)
[2025-06-03 16:47:05] 2025-06-03 20:46:47,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 16:47:05] 2025-06-03 20:46:47,710 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 16:47:05] 2025-06-03 20:46:47,710 | INFO     | update_server=False
[2025-06-03 16:47:05] 2025-06-03 20:46:47,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 16:47:05] 2025-06-03 20:46:47,710 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 16:47:05] 2025-06-03 20:46:47,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:47:05] 2025-06-03 20:46:47,711 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 16:47:05] 2025-06-03 20:46:47,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 16:47:05] 2025-06-03 20:46:47,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 16:47:05] 2025-06-03 20:46:47,779 | INFO     | all data control threads have been joined
[2025-06-03 16:47:05] 2025-06-03 20:46:48,187 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 16:47:05] 2025-06-03 20:46:48,187 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 16:47:05] 2025-06-03 20:46:48,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 16:47:05] 2025-06-03 20:46:48,187 | INFO     | will abort loop
[2025-06-03 16:47:05] 2025-06-03 20:46:48,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 16:47:05] 2025-06-03 20:46:48,293 | INFO     | all payload control threads have been joined
[2025-06-03 16:47:05] 2025-06-03 20:46:48,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 16:47:05] 2025-06-03 20:46:48,715 | INFO     | [job] retrieve thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:48,716 | INFO     | [job] queue monitor thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:48,784 | INFO     | [data] control thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:48,790 | INFO     | all job control threads have been joined
[2025-06-03 16:47:05] 2025-06-03 20:46:48,975 | INFO     | [payload] failed_post thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:49,193 | INFO     | [job] job monitor thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:49,230 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:49,278 | INFO     | [job] validate thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:49,296 | INFO     | [payload] control thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:49,317 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:49,448 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:49,795 | INFO     | [job] control thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:49,911 | INFO     | [payload] validate_post thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:49,953 | INFO     | [data] copytool_in thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:50,472 | INFO     | [data] copytool_out thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:52,258 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:58,363 | INFO     | job.realtimelogging is not enabled
[2025-06-03 16:47:05] 2025-06-03 20:46:59,368 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 16:47:05] 2025-06-03 20:46:59,919 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034185082688)>', '<ExcThread(monitor, started 140033742841600)>']
[2025-06-03 16:47:05] 2025-06-03 20:47:00,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 16:47:05] 2025-06-03 20:47:00,770 | INFO     | [monitor] control thread has ended
[2025-06-03 16:47:05] 2025-06-03 20:47:04,944 | INFO     | all workflow threads have been joined
[2025-06-03 16:47:05] 2025-06-03 20:47:04,945 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 16:47:05] 2025-06-03 20:47:04,945 | INFO     | traces error code: 0
[2025-06-03 16:47:05] 2025-06-03 20:47:04,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 16:47:05] 2025-06-03 20:47:05,012 [wrapper] ==== pilot stdout END ====
[2025-06-03 16:47:05] 2025-06-03 20:47:05,016 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 16:47:05] 2025-06-03 20:47:05,034 [wrapper] pilotpid: 50908
[2025-06-03 16:47:05] 2025-06-03 20:47:05,087 [wrapper] Pilot exit status: 0
[2025-06-03 16:47:05] 2025-06-03 20:47:05,148 [wrapper] pandaids: 6677676530
[2025-06-03 16:47:05] 2025-06-03 20:47:05,199 [wrapper] cleanup supervisor_pilot 73139 50909
[2025-06-03 16:47:05] 2025-06-03 20:47:05,202 [wrapper] Test setup, not cleaning
[2025-06-03 16:47:05] 2025-06-03 20:47:05,204 [wrapper] apfmon messages muted
[2025-06-03 16:47:05] 2025-06-03 20:47:05,206 [wrapper] ==== wrapper stdout END ====
[2025-06-03 16:47:05] 2025-06-03 20:47:05,208 [wrapper] ==== wrapper stderr END ====
[2025-06-03 16:47:05]  *** Error codes and diagnostics ***
[2025-06-03 16:47:05]     "exeErrorCode": 0,
[2025-06-03 16:47:05]     "exeErrorDiag": "",
[2025-06-03 16:47:05]     "pilotErrorCode": 0,
[2025-06-03 16:47:05]     "pilotErrorDiag": "",
[2025-06-03 16:47:05]  *** Listing of results directory ***
[2025-06-03 16:47:05] total 390316
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 10:52 pilot3.tar.gz
[2025-06-03 16:47:05] -rwx------ 1 boincer umatlas     37140 Jun  3 11:15 runpilot2-wrapper.sh
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 11:15 queuedata.json
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas       100 Jun  3 15:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 16:47:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 15:54 run_atlas
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas       105 Jun  3 15:54 job.xml
[2025-06-03 16:47:05] -rw-r--r-- 2 boincer umatlas 218292530 Jun  3 15:54 EVNT.45006593._001473.pool.root.1
[2025-06-03 16:47:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 15:54 start_atlas.sh
[2025-06-03 16:47:05] drwxrwx--x 2 boincer umatlas      4096 Jun  3 15:54 shared
[2025-06-03 16:47:05] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 15:54 input.tar.gz
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas         0 Jun  3 15:54 boinc_lockfile
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 15:54 pandaJob.out
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas    986893 Jun  3 15:54 agis_schedconf.cvmfs.json
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas   1603667 Jun  3 15:54 agis_ddmendpoints.agis.ALL.json
[2025-06-03 16:47:05] drwx------ 4 boincer umatlas      4096 Jun  3 15:54 pilot3
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas      6386 Jun  3 16:45 init_data.xml
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas 176341030 Jun  3 16:46 HITS.45006595._036654.pool.root.1
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas        95 Jun  3 16:46 pilot_heartbeat.json
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas       529 Jun  3 16:46 boinc_task_state.xml
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas      1041 Jun  3 16:46 memory_monitor_summary.json
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas    278457 Jun  3 16:46 log.45006595._036654.job.log.tgz.1
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas      7709 Jun  3 16:46 heartbeat.json
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas        27 Jun  3 16:47 wrapper_checkpoint.txt
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 16:47 boinc_mmap_file
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas      4735 Jun  3 16:47 pilotlog.txt
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas    326027 Jun  3 16:47 log.45006595._036654.job.log.1
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas       357 Jun  3 16:47 output.list
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas       620 Jun  3 16:47 runtime_log
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas    624640 Jun  3 16:47 result.tar.gz
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas      8654 Jun  3 16:47 runtime_log.err
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas       658 Jun  3 16:47 de8NDmHXig7n9Rq4apOajLDm4fhM0noT9bVof3QYDmE2YKDm5X2NSo.diag
[2025-06-03 16:47:05] -rw-r--r-- 1 boincer umatlas     21872 Jun  3 16:47 stderr.txt
[2025-06-03 16:47:05] HITS file was successfully produced:
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas 176341030 Jun  3 16:46 shared/HITS.pool.root.1
[2025-06-03 16:47:05]  *** Contents of shared directory: ***
[2025-06-03 16:47:05] total 386528
[2025-06-03 16:47:05] -rw-r--r-- 2 boincer umatlas 218292530 Jun  3 15:54 ATLAS.root_0
[2025-06-03 16:47:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 15:54 start_atlas.sh
[2025-06-03 16:47:05] -rw-r--r-- 2 boincer umatlas    508877 Jun  3 15:54 input.tar.gz
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas 176341030 Jun  3 16:46 HITS.pool.root.1
[2025-06-03 16:47:05] -rw------- 1 boincer umatlas    624640 Jun  3 16:47 result.tar.gz
16:47:06 (35634): run_atlas exited; CPU time 21819.399832
16:47:06 (35634): called boinc_finish(0)

</stderr_txt>
]]>

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