Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:12:22 (1991879): wrapper (7.7.26015): starting
13:12:22 (1991879): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 13:12:22] Arguments: --nthreads 12
[2025-06-03 13:12:22] Threads: 12
[2025-06-03 13:12:22] Checking for CVMFS
[2025-06-03 13:12:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:12:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:12:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:12:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:12:22] 2.11.5.0 1796680 22923 143832 146754 0 438 37433647 45568000 21932 130560 0 262649086 99.837 117696730 27083 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 13:12:22] CVMFS is ok
[2025-06-03 13:12:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:12:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:12:22] Further information can be found at the LHC@home message board.
[2025-06-03 13:12:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:12:22] Checking for apptainer binary...
[2025-06-03 13:12:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:12:22] Running /usr/bin/apptainer --version
[2025-06-03 13:12:22] apptainer version 1.4.0-1.el9
[2025-06-03 13:12:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:12:23] wns0068.triumf.lcg
[2025-06-03 13:12:23] apptainer works
[2025-06-03 13:12:23] Set ATHENA_PROC_NUMBER=12
[2025-06-03 13:12:23] Set ATHENA_CORE_NUMBER=12
[2025-06-03 13:12:23] Starting ATLAS job with PandaID=6677920781
[2025-06-03 13:12:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:15:34]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:15:34] 2025-06-03 20:15:19,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:15:34] 2025-06-03 20:15:19,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | WARNING  | found no stored workdir sizes
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | WARNING  | wrong length of table data, x=[1748981581.0], y=[2282.0] (must be same and length>=4)
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | INFO     | ..............................
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . Timing measurements:
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . get job = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . initial setup = 2 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . payload setup = 7 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . stage-in = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . payload execution = 20 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . stage-out = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . log creation = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | ..............................
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677920781/pilotlog.txt
[2025-06-03 13:15:34] 2025-06-03 20:15:19,710 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 13:15:34] - Log from pilotlog.txt -
[2025-06-03 13:15:34] 2025-06-03 20:15:19,696 | INFO     | extracted standard info from prmon json
[2025-06-03 13:15:34] 2025-06-03 20:15:19,696 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:15:34] 2025-06-03 20:15:19,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:15:34] 2025-06-03 20:15:19,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | WARNING  | found no stored workdir sizes
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | WARNING  | wrong length of table data, x=[1748981581.0], y=[2282.0] (must be same and length>=4)
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | INFO     | ..............................
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . Timing measurements:
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . get job = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . initial setup = 2 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . payload setup = 7 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . stage-in = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . payload execution = 20 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . stage-out = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . log creation = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | ..............................
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677920781/pilotlog.txt
[2025-06-03 13:15:34] 2025-06-03 20:15:19,710 | WARNING  | 
[2025-06-03 13:15:34] [begin log extracts]
[2025-06-03 13:15:34] - Log from pilotlog.txt -
[2025-06-03 13:15:34] 2025-06-03 20:15:19,696 | INFO     | extracted standard info from prmon json
[2025-06-03 13:15:34] 2025-06-03 20:15:19,696 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:15:34] 2025-06-03 20:15:19,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:15:34] 2025-06-03 20:15:19,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | WARNING  | found no stored workdir sizes
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | WARNING  | wrong length of table data, x=[1748981581.0], y=[2282.0] (must be same and length>=4)
[2025-06-03 13:15:34] 2025-06-03 20:15:19,697 | INFO     | ..............................
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . Timing measurements:
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . get job = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . initial setup = 2 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . payload setup = 7 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . stage-in = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . payload execution = 20 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . stage-out = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | . log creation = 0 s
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | ..............................
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:15:34] 2025-06-03 20:15:19,698 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677920781/pilotlog.txt
[2025-06-03 13:15:34] [end log extracts]
[2025-06-03 13:15:34] 2025-06-03 20:15:19,711 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 13:15:34] 2025-06-03 20:15:19,712 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 13:15:34] 2025-06-03 20:15:20,133 | INFO     | 
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | job summary report
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | --------------------------------------------------
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | PanDA job id: 6677920781
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | task id: 45006595
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 13:13:12,026 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | pilot state: failed 
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | transexitcode: 65
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | exeerrorcode: 65
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | exitcode: 65
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | cpuconsumptiontime: 16 s
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | nevents: 0
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | neventsw: 0
[2025-06-03 13:15:34] 2025-06-03 20:15:20,134 | INFO     | pid: 2012570
[2025-06-03 13:15:34] 2025-06-03 20:15:20,135 | INFO     | pgrp: 2012570
[2025-06-03 13:15:34] 2025-06-03 20:15:20,135 | INFO     | corecount: 12
[2025-06-03 13:15:34] 2025-06-03 20:15:20,135 | INFO     | event service: False
[2025-06-03 13:15:34] 2025-06-03 20:15:20,135 | INFO     | sizes: {0: 2405181, 5: 2405387, 11: 2405443, 31: 2428768, 32: 2433007, 152: 2433121}
[2025-06-03 13:15:34] 2025-06-03 20:15:20,135 | INFO     | --------------------------------------------------
[2025-06-03 13:15:34] 2025-06-03 20:15:20,135 | INFO     | 
[2025-06-03 13:15:34] 2025-06-03 20:15:20,135 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 13:15:34] 2025-06-03 20:15:20,149 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:15:34] 2025-06-03 20:15:20,151 | INFO     | job 6677920781 has completed (purged errors)
[2025-06-03 13:15:34] 2025-06-03 20:15:20,151 | INFO     | overall cleanup function is called
[2025-06-03 13:15:34] 2025-06-03 20:15:21,156 | INFO     | --- collectZombieJob: --- 10, [2012570]
[2025-06-03 13:15:34] 2025-06-03 20:15:21,157 | INFO     | zombie collector waiting for pid 2012570
[2025-06-03 13:15:34] 2025-06-03 20:15:21,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:15:34] 2025-06-03 20:15:21,157 | INFO     | collected zombie processes
[2025-06-03 13:15:34] 2025-06-03 20:15:21,157 | INFO     | will attempt to kill all subprocesses of pid=2012570
[2025-06-03 13:15:34] 2025-06-03 20:15:21,359 | INFO     | process IDs to be killed: [2012570] (in reverse order)
[2025-06-03 13:15:34] 2025-06-03 20:15:21,434 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:15:34] 2025-06-03 20:15:21,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:15:34] 2025-06-03 20:15:21,444 | INFO     | did not find any defunct processes belonging to 2012570
[2025-06-03 13:15:34] 2025-06-03 20:15:21,453 | INFO     | did not find any defunct processes belonging to 2012570
[2025-06-03 13:15:34] 2025-06-03 20:15:21,454 | INFO     | ready for new job
[2025-06-03 13:15:34] 2025-06-03 20:15:21,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:15:34] 2025-06-03 20:15:21,456 | INFO     | **************************************
[2025-06-03 13:15:34] 2025-06-03 20:15:21,456 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:15:34] 2025-06-03 20:15:21,456 | INFO     | **************************************
[2025-06-03 13:15:34] 2025-06-03 20:15:21,456 | INFO     | 
[2025-06-03 13:15:34] 2025-06-03 20:15:21,458 | INFO     | architecture information:
[2025-06-03 13:15:34] 2025-06-03 20:15:21,458 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:15:34] 2025-06-03 20:15:21,469 | INFO     | cat /etc/os-release:
[2025-06-03 13:15:34] NAME="CentOS Linux"
[2025-06-03 13:15:34] VERSION="7 (Core)"
[2025-06-03 13:15:34] ID="centos"
[2025-06-03 13:15:34] ID_LIKE="rhel fedora"
[2025-06-03 13:15:34] VERSION_ID="7"
[2025-06-03 13:15:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:15:34] ANSI_COLOR="0;31"
[2025-06-03 13:15:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:15:34] HOME_URL="https://www.centos.org/"
[2025-06-03 13:15:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:15:34] 
[2025-06-03 13:15:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:15:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:15:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:15:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:15:34] 
[2025-06-03 13:15:34] 2025-06-03 20:15:21,470 | INFO     | **************************************
[2025-06-03 13:15:34] 2025-06-03 20:15:21,973 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 13:15:34] 2025-06-03 20:15:21,986 | INFO     | sufficient remaining disk space (1557327249408 B)
[2025-06-03 13:15:34] 2025-06-03 20:15:21,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:15:34] 2025-06-03 20:15:21,987 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:15:34] 2025-06-03 20:15:21,987 | INFO     | update_server=False
[2025-06-03 13:15:34] 2025-06-03 20:15:21,987 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:15:34] 2025-06-03 20:15:22,138 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 13:15:34] 2025-06-03 20:15:22,139 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 13:15:34] 2025-06-03 20:15:22,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:15:34] 2025-06-03 20:15:22,139 | INFO     | will abort loop
[2025-06-03 13:15:34] 2025-06-03 20:15:22,184 | INFO     | all payload control threads have been joined
[2025-06-03 13:15:34] 2025-06-03 20:15:22,207 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:15:34] 2025-06-03 20:15:22,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:15:34] 2025-06-03 20:15:22,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:15:34] 2025-06-03 20:15:22,393 | INFO     | all data control threads have been joined
[2025-06-03 13:15:34] 2025-06-03 20:15:22,807 | INFO     | all job control threads have been joined
[2025-06-03 13:15:34] 2025-06-03 20:15:22,992 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:23,143 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:23,189 | INFO     | [payload] control thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:23,245 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:15:34] 2025-06-03 20:15:23,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:15:34] 2025-06-03 20:15:23,399 | INFO     | [data] control thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:23,520 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:23,652 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:23,813 | INFO     | [job] control thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:23,824 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:23,981 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:24,204 | INFO     | [job] validate thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:24,210 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:24,337 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:24,397 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:24,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:15:34] 2025-06-03 20:15:25,256 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:25,798 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:27,310 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:15:34] 2025-06-03 20:15:29,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094510196544)>', '<ExcThread(monitor, started 140093830452992)>']
[2025-06-03 13:15:34] 2025-06-03 20:15:30,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:15:34] 2025-06-03 20:15:30,253 | INFO     | [monitor] control thread has ended
[2025-06-03 13:15:34] 2025-06-03 20:15:34,313 | INFO     | all workflow threads have been joined
[2025-06-03 13:15:34] 2025-06-03 20:15:34,314 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:15:34] 2025-06-03 20:15:34,314 | INFO     | traces error code: 0
[2025-06-03 13:15:34] 2025-06-03 20:15:34,314 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:15:34] 2025-06-03 20:15:34,467 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:15:34] 2025-06-03 20:15:34,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:15:34] 2025-06-03 20:15:34,471 [wrapper] pilotpid: 1995435
[2025-06-03 13:15:34] 2025-06-03 20:15:34,473 [wrapper] Pilot exit status: 0
[2025-06-03 13:15:34] 2025-06-03 20:15:34,481 [wrapper] pandaids: 6677920781
[2025-06-03 13:15:34] 2025-06-03 20:15:34,527 [wrapper] cleanup supervisor_pilot 1995441 1995436
[2025-06-03 13:15:34] 2025-06-03 20:15:34,529 [wrapper] Test setup, not cleaning
[2025-06-03 13:15:34] 2025-06-03 20:15:34,531 [wrapper] apfmon messages muted
[2025-06-03 13:15:34] 2025-06-03 20:15:34,532 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:15:34] 2025-06-03 20:15:34,535 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:15:34]  *** Error codes and diagnostics ***
[2025-06-03 13:15:34]     "exeErrorCode": 65,
[2025-06-03 13:15:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 13:15:34]     "pilotErrorCode": 1305,
[2025-06-03 13:15:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 13:15:34]  *** Listing of results directory ***
[2025-06-03 13:15:34] total 214592
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc    495897 Jun  3 10:46 pilot3.tar.gz
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc      5111 Jun  3 11:27 queuedata.json
[2025-06-03 13:15:34] -rwx------. 1 boinc boinc     37140 Jun  3 11:28 runpilot2-wrapper.sh
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc       100 Jun  3 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:15:34] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 13:12 run_atlas
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc       105 Jun  3 13:12 job.xml
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc      6601 Jun  3 13:12 init_data.xml
[2025-06-03 13:15:34] -rw-r--r--. 2 boinc boinc 215718210 Jun  3 13:12 EVNT.45006593._001696.pool.root.1
[2025-06-03 13:15:34] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:12 start_atlas.sh
[2025-06-03 13:15:34] drwxrwx--x. 2 boinc boinc      4096 Jun  3 13:12 shared
[2025-06-03 13:15:34] -rw-r--r--. 2 boinc boinc    508884 Jun  3 13:12 input.tar.gz
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc         0 Jun  3 13:12 boinc_lockfile
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc      2525 Jun  3 13:12 pandaJob.out
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc    986893 Jun  3 13:12 agis_schedconf.cvmfs.json
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc   1603667 Jun  3 13:12 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:15:34] drwx------. 4 boinc boinc      4096 Jun  3 13:12 pilot3
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc       952 Jun  3 13:13 memory_monitor_summary.json
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc     20295 Jun  3 13:13 log.45006595._042291.job.log.tgz.1
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc        95 Jun  3 13:14 pilot_heartbeat.json
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc      8313 Jun  3 13:15 heartbeat.json
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc       524 Jun  3 13:15 boinc_task_state.xml
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc      4538 Jun  3 13:15 pilotlog.txt
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc     74172 Jun  3 13:15 log.45006595._042291.job.log.1
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:15 boinc_mmap_file
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc       188 Jun  3 13:15 output.list
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc       620 Jun  3 13:15 runtime_log
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc    112640 Jun  3 13:15 result.tar.gz
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc      8484 Jun  3 13:15 runtime_log.err
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc       644 Jun  3 13:15 jC9MDmMYlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmflKDmDc7ZSn.diag
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc        22 Jun  3 13:15 wrapper_checkpoint.txt
[2025-06-03 13:15:34] -rw-r--r--. 1 boinc boinc     21449 Jun  3 13:15 stderr.txt
[2025-06-03 13:15:34] No HITS result produced
[2025-06-03 13:15:34]  *** Contents of shared directory: ***
[2025-06-03 13:15:34] total 211296
[2025-06-03 13:15:34] -rw-r--r--. 2 boinc boinc 215718210 Jun  3 13:12 ATLAS.root_0
[2025-06-03 13:15:34] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:12 start_atlas.sh
[2025-06-03 13:15:34] -rw-r--r--. 2 boinc boinc    508884 Jun  3 13:12 input.tar.gz
[2025-06-03 13:15:34] -rw-------. 1 boinc boinc    112640 Jun  3 13:15 result.tar.gz
13:15:36 (1991879): run_atlas exited; CPU time 21.527421
13:15:36 (1991879): called boinc_finish(0)

</stderr_txt>
]]>

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