Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:12:39 (799479): wrapper (7.7.26015): starting
13:12:39 (799479): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 13:12:39] Arguments: --nthreads 12
[2025-06-03 13:12:39] Threads: 12
[2025-06-03 13:12:39] Checking for CVMFS
[2025-06-03 13:12:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:12:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:12:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:12:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:12:40] 2.11.5.0 3006969 22692 232348 146754 2 876 35437203 45568001 14030 130560 0 217422785 99.811 131596191 27413 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 13:12:40] CVMFS is ok
[2025-06-03 13:12:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 13:12:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 13:12:40] Further information can be found at the LHC@home message board.
[2025-06-03 13:12:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:12:40] Checking for apptainer binary...
[2025-06-03 13:12:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:12:40] Running /usr/bin/apptainer --version
[2025-06-03 13:12:40] apptainer version 1.4.0-1.el9
[2025-06-03 13:12:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:12:40] wns0027.triumf.lcg
[2025-06-03 13:12:40] apptainer works
[2025-06-03 13:12:40] Set ATHENA_PROC_NUMBER=12
[2025-06-03 13:12:40] Set ATHENA_CORE_NUMBER=12
[2025-06-03 13:12:40] Starting ATLAS job with PandaID=6677920544
[2025-06-03 13:12:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:15:40]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:15:40] 2025-06-03 20:15:26,034 | INFO     | extracted standard info from prmon json
[2025-06-03 13:15:40] 2025-06-03 20:15:26,034 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | found no stored workdir sizes
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | WARNING  | wrong length of table data, x=[1748981590.0], y=[1066.0] (must be same and length>=4)
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | ..............................
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . Timing measurements:
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . get job = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . initial setup = 2 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . payload setup = 4 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . stage-in = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . payload execution = 14 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . stage-out = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . log creation = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | ..............................
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:15:40] 2025-06-03 20:15:26,037 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677920544/pilotlog.txt
[2025-06-03 13:15:40] 2025-06-03 20:15:26,046 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 13:15:40] - Log from pilotlog.txt -
[2025-06-03 13:15:40] 2025-06-03 20:15:26,034 | INFO     | extracted standard info from prmon json
[2025-06-03 13:15:40] 2025-06-03 20:15:26,034 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | found no stored workdir sizes
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | WARNING  | wrong length of table data, x=[1748981590.0], y=[1066.0] (must be same and length>=4)
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | ..............................
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . Timing measurements:
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . get job = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . initial setup = 2 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . payload setup = 4 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . stage-in = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . payload execution = 14 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . stage-out = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . log creation = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | ..............................
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:15:40] 2025-06-03 20:15:26,037 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677920544/pilotlog.txt
[2025-06-03 13:15:40] 2025-06-03 20:15:26,047 | WARNING  | 
[2025-06-03 13:15:40] [begin log extracts]
[2025-06-03 13:15:40] - Log from pilotlog.txt -
[2025-06-03 13:15:40] 2025-06-03 20:15:26,034 | INFO     | extracted standard info from prmon json
[2025-06-03 13:15:40] 2025-06-03 20:15:26,034 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | WARNING  | found no stored workdir sizes
[2025-06-03 13:15:40] 2025-06-03 20:15:26,035 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | WARNING  | wrong length of table data, x=[1748981590.0], y=[1066.0] (must be same and length>=4)
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | ..............................
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . Timing measurements:
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . get job = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . initial setup = 2 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . payload setup = 4 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . stage-in = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . payload execution = 14 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . stage-out = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | . log creation = 0 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | ..............................
[2025-06-03 13:15:40] 2025-06-03 20:15:26,036 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 13:15:40] 2025-06-03 20:15:26,037 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677920544/pilotlog.txt
[2025-06-03 13:15:40] [end log extracts]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,047 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 13:15:40] 2025-06-03 20:15:26,048 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 13:15:40] 2025-06-03 20:15:26,507 | INFO     | 
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | job summary report
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | --------------------------------------------------
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | PanDA job id: 6677920544
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | task id: 45006595
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 13:13:17,117 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | pilot state: failed 
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | transexitcode: 65
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | exeerrorcode: 65
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | exitcode: 65
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | cpuconsumptiontime: 15 s
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | nevents: 0
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | neventsw: 0
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | pid: 809352
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | pgrp: 809352
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | corecount: 12
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | event service: False
[2025-06-03 13:15:40] 2025-06-03 20:15:26,508 | INFO     | sizes: {0: 2405181, 3: 2405387, 11: 2405415, 22: 2428535, 23: 2432770, 25: 2432798, 144: 2433068}
[2025-06-03 13:15:40] 2025-06-03 20:15:26,509 | INFO     | --------------------------------------------------
[2025-06-03 13:15:40] 2025-06-03 20:15:26,509 | INFO     | 
[2025-06-03 13:15:40] 2025-06-03 20:15:26,509 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 13:15:40] 2025-06-03 20:15:26,523 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,523 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,523 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,523 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | job 6677920544 has completed (purged errors)
[2025-06-03 13:15:40] 2025-06-03 20:15:26,524 | INFO     | overall cleanup function is called
[2025-06-03 13:15:40] 2025-06-03 20:15:27,530 | INFO     | --- collectZombieJob: --- 10, [809352]
[2025-06-03 13:15:40] 2025-06-03 20:15:27,530 | INFO     | zombie collector waiting for pid 809352
[2025-06-03 13:15:40] 2025-06-03 20:15:27,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:15:40] 2025-06-03 20:15:27,531 | INFO     | collected zombie processes
[2025-06-03 13:15:40] 2025-06-03 20:15:27,531 | INFO     | will attempt to kill all subprocesses of pid=809352
[2025-06-03 13:15:40] 2025-06-03 20:15:27,704 | INFO     | process IDs to be killed: [809352] (in reverse order)
[2025-06-03 13:15:40] 2025-06-03 20:15:27,770 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:15:40] 2025-06-03 20:15:27,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:15:40] 2025-06-03 20:15:27,778 | INFO     | did not find any defunct processes belonging to 809352
[2025-06-03 13:15:40] 2025-06-03 20:15:27,785 | INFO     | did not find any defunct processes belonging to 809352
[2025-06-03 13:15:40] 2025-06-03 20:15:27,785 | INFO     | ready for new job
[2025-06-03 13:15:40] 2025-06-03 20:15:27,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:15:40] 2025-06-03 20:15:27,787 | INFO     | **************************************
[2025-06-03 13:15:40] 2025-06-03 20:15:27,787 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:15:40] 2025-06-03 20:15:27,787 | INFO     | **************************************
[2025-06-03 13:15:40] 2025-06-03 20:15:27,787 | INFO     | 
[2025-06-03 13:15:40] 2025-06-03 20:15:27,789 | INFO     | architecture information:
[2025-06-03 13:15:40] 2025-06-03 20:15:27,789 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:15:40] 2025-06-03 20:15:27,799 | INFO     | cat /etc/os-release:
[2025-06-03 13:15:40] NAME="CentOS Linux"
[2025-06-03 13:15:40] VERSION="7 (Core)"
[2025-06-03 13:15:40] ID="centos"
[2025-06-03 13:15:40] ID_LIKE="rhel fedora"
[2025-06-03 13:15:40] VERSION_ID="7"
[2025-06-03 13:15:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:15:40] ANSI_COLOR="0;31"
[2025-06-03 13:15:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:15:40] HOME_URL="https://www.centos.org/"
[2025-06-03 13:15:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:15:40] 
[2025-06-03 13:15:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:15:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:15:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:15:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:15:40] 
[2025-06-03 13:15:40] 2025-06-03 20:15:27,799 | INFO     | **************************************
[2025-06-03 13:15:40] 2025-06-03 20:15:28,302 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 13:15:40] 2025-06-03 20:15:28,313 | INFO     | sufficient remaining disk space (1952476823552 B)
[2025-06-03 13:15:40] 2025-06-03 20:15:28,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:15:40] 2025-06-03 20:15:28,314 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:15:40] 2025-06-03 20:15:28,314 | INFO     | update_server=False
[2025-06-03 13:15:40] 2025-06-03 20:15:28,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:15:40] 2025-06-03 20:15:28,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:15:40] 2025-06-03 20:15:28,444 | INFO     | all data control threads have been joined
[2025-06-03 13:15:40] 2025-06-03 20:15:28,728 | INFO     | all job control threads have been joined
[2025-06-03 13:15:40] 2025-06-03 20:15:29,019 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:15:40] 2025-06-03 20:15:29,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:15:40] 2025-06-03 20:15:29,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:15:40] 2025-06-03 20:15:29,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:15:40] 2025-06-03 20:15:29,158 | INFO     | aborting loop
[2025-06-03 13:15:40] 2025-06-03 20:15:29,318 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:29,360 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:29,368 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:29,421 | INFO     | all payload control threads have been joined
[2025-06-03 13:15:40] 2025-06-03 20:15:29,449 | INFO     | [data] control thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:29,470 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:29,731 | INFO     | [job] control thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:29,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:15:40] 2025-06-03 20:15:29,909 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:29,921 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:30,163 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:30,309 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:30,319 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:30,426 | INFO     | [payload] control thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:30,584 | INFO     | [job] validate thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:30,713 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:31,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:15:40] 2025-06-03 20:15:32,124 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:33,775 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:15:40] 2025-06-03 20:15:35,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182567864128)>', '<ExcThread(monitor, started 140182240069376)>']
[2025-06-03 13:15:40] 2025-06-03 20:15:36,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:15:40] 2025-06-03 20:15:36,049 | INFO     | [monitor] control thread has ended
[2025-06-03 13:15:40] 2025-06-03 20:15:40,170 | INFO     | all workflow threads have been joined
[2025-06-03 13:15:40] 2025-06-03 20:15:40,171 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:15:40] 2025-06-03 20:15:40,171 | INFO     | traces error code: 0
[2025-06-03 13:15:40] 2025-06-03 20:15:40,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:15:40] 2025-06-03 20:15:40,309 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:15:40] 2025-06-03 20:15:40,311 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:15:40] 2025-06-03 20:15:40,313 [wrapper] pilotpid: 803041
[2025-06-03 13:15:40] 2025-06-03 20:15:40,315 [wrapper] Pilot exit status: 0
[2025-06-03 13:15:40] 2025-06-03 20:15:40,322 [wrapper] pandaids: 6677920544
[2025-06-03 13:15:40] 2025-06-03 20:15:40,366 [wrapper] cleanup supervisor_pilot  803047 803042
[2025-06-03 13:15:40] 2025-06-03 20:15:40,368 [wrapper] Test setup, not cleaning
[2025-06-03 13:15:40] 2025-06-03 20:15:40,370 [wrapper] apfmon messages muted
[2025-06-03 13:15:40] 2025-06-03 20:15:40,371 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:15:40] 2025-06-03 20:15:40,373 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:15:40]  *** Error codes and diagnostics ***
[2025-06-03 13:15:40]     "exeErrorCode": 65,
[2025-06-03 13:15:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 13:15:40]     "pilotErrorCode": 1305,
[2025-06-03 13:15:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 13:15:40]  *** Listing of results directory ***
[2025-06-03 13:15:40] total 212264
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc    495897 Jun  3 10:46 pilot3.tar.gz
[2025-06-03 13:15:40] -rwx------. 1 boinc boinc     37140 Jun  3 11:27 runpilot2-wrapper.sh
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc      5111 Jun  3 11:27 queuedata.json
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc       100 Jun  3 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:15:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 13:12 run_atlas
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc       105 Jun  3 13:12 job.xml
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc      6600 Jun  3 13:12 init_data.xml
[2025-06-03 13:15:40] -rw-r--r--. 2 boinc boinc 213332461 Jun  3 13:12 EVNT.45006593._001688.pool.root.1
[2025-06-03 13:15:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:12 start_atlas.sh
[2025-06-03 13:15:40] drwxrwx--x. 2 boinc boinc      4096 Jun  3 13:12 shared
[2025-06-03 13:15:40] -rw-r--r--. 2 boinc boinc    508880 Jun  3 13:12 input.tar.gz
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc         0 Jun  3 13:12 boinc_lockfile
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc      2525 Jun  3 13:12 pandaJob.out
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc    986893 Jun  3 13:12 agis_schedconf.cvmfs.json
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc   1603667 Jun  3 13:12 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:15:40] drwx------. 4 boinc boinc      4096 Jun  3 13:12 pilot3
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc       972 Jun  3 13:13 memory_monitor_summary.json
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc     20523 Jun  3 13:13 log.45006595._042096.job.log.tgz.1
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc        95 Jun  3 13:14 pilot_heartbeat.json
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc      8321 Jun  3 13:15 heartbeat.json
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc       523 Jun  3 13:15 boinc_task_state.xml
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc      8192 Jun  3 13:15 boinc_mmap_file
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc        22 Jun  3 13:15 wrapper_checkpoint.txt
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc      4352 Jun  3 13:15 pilotlog.txt
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc     72597 Jun  3 13:15 log.45006595._042096.job.log.1
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc       188 Jun  3 13:15 output.list
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc       620 Jun  3 13:15 runtime_log
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc    112640 Jun  3 13:15 result.tar.gz
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc      8484 Jun  3 13:15 runtime_log.err
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc       644 Jun  3 13:15 JJGODmXXlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyelKDm99yksn.diag
[2025-06-03 13:15:40] -rw-r--r--. 1 boinc boinc     21427 Jun  3 13:15 stderr.txt
[2025-06-03 13:15:40] No HITS result produced
[2025-06-03 13:15:40]  *** Contents of shared directory: ***
[2025-06-03 13:15:40] total 208968
[2025-06-03 13:15:40] -rw-r--r--. 2 boinc boinc 213332461 Jun  3 13:12 ATLAS.root_0
[2025-06-03 13:15:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 13:12 start_atlas.sh
[2025-06-03 13:15:40] -rw-r--r--. 2 boinc boinc    508880 Jun  3 13:12 input.tar.gz
[2025-06-03 13:15:40] -rw-------. 1 boinc boinc    112640 Jun  3 13:15 result.tar.gz
13:15:41 (799479): run_atlas exited; CPU time 18.994575
13:15:41 (799479): called boinc_finish(0)

</stderr_txt>
]]>

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