Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:02:43 (1386620): wrapper (7.7.26015): starting
06:02:43 (1386620): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 06:02:43] Arguments: --nthreads 2
[2025-06-04 06:02:43] Threads: 2
[2025-06-04 06:02:43] Checking for CVMFS
[2025-06-04 06:02:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:02:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:02:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:02:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:02:43] 2.9.2.0 873760 2108 58396 146767 2 56 32390302 36864000 0 130560 0 1376410 99.990 520109 47642 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 06:02:43] CVMFS is ok
[2025-06-04 06:02:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:02:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:02:43] Further information can be found at the LHC@home message board.
[2025-06-04 06:02:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:02:43] Checking for apptainer binary...
[2025-06-04 06:02:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:02:43] Running /usr/bin/apptainer --version
[2025-06-04 06:02:43] apptainer version 1.3.6-6.1
[2025-06-04 06:02:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:02:43] itA173
[2025-06-04 06:02:43] apptainer works
[2025-06-04 06:02:43] Set ATHENA_PROC_NUMBER=2
[2025-06-04 06:02:43] Set ATHENA_CORE_NUMBER=2
[2025-06-04 06:02:43] Starting ATLAS job with PandaID=6677920548
[2025-06-04 06:02:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:55:35]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:55:35] 2025-06-04 05:55:13,219 | INFO     | monitor loop #520: job 0:6677920548 is in state 'finished'
[2025-06-04 07:55:35] 2025-06-04 05:55:13,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:55:35] 2025-06-04 05:55:15,722 | INFO     | monitor loop #521: job 0:6677920548 is in state 'finished'
[2025-06-04 07:55:35] 2025-06-04 05:55:15,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 07:55:35] 2025-06-04 05:55:16,380 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:55:35] 2025-06-04 05:55:16,380 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677920548/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:55:35] 2025-06-04 05:55:16,380 | INFO     | extracted standard info from prmon json
[2025-06-04 07:55:35] 2025-06-04 05:55:16,380 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:55:35] 2025-06-04 05:55:16,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:55:35] 2025-06-04 05:55:16,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:55:35] 2025-06-04 05:55:16,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:55:35] 2025-06-04 05:55:16,381 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | sum of square deviations: 412686807.5
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | sum of deviations: -9676637826.999996
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | mean x: 1749013130.5
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | mean y: 2360868.018181818
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | -- intersect: 41013040906.574974
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | intersect: 41013040906.574974
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | chi2: 1.575303092212711
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | sum of square deviations: 358927660.0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | sum of deviations: -8765444044.0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | mean x: 1749012978.0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | mean y: 2363457.2952380953
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | -- intersect: 42715358579.73524
[2025-06-04 07:55:35] 2025-06-04 05:55:16,382 | INFO     | intersect: 42715358579.73524
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | chi2: 1.572237629339554
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | current chi2=1.572237629339554 (change=0.19459511558827594 %)
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | right removable region: 104
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | sum of square deviations: 358927660.0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | sum of deviations: -22839462742.0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | mean x: 1749013283.0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | mean y: 2397130.7047619047
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | -- intersect: 111296477147.66862
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | intersect: 111296477147.66862
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | chi2: 0.09873936652461347
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | current chi2=0.09873936652461347 (change=93.73204007452803 %)
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | sum of deviations: -18541262472.499996
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | mean x: 1749013435.5
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | mean y: 2383702.09
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | -- intersect: 104594139869.48671
[2025-06-04 07:55:35] 2025-06-04 05:55:16,383 | INFO     | intersect: 104594139869.48671
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | chi2: 0.09280689650455932
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | current chi2=0.09280689650455932 (change=6.008211546076021 %)
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | left removable region: 20
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | sum of square deviations: 183761585.0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | sum of deviations: -10219884032.5
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | mean x: 1749013557.5
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | mean y: 2360527.511904762
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | -- intersect: 97273592319.07634
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | intersect: 97273592319.07634
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | chi2: 0.06310820488118073
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | -- intersect: 97273592319.07634
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | current memory leak: -55.61 B/s (using 84 data points, chi2=0.06)
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | ..............................
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | . Timing measurements:
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | . get job = 0 s
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | . initial setup = 1 s
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | . payload setup = 8 s
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | . stage-in = 0 s
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | . payload execution = 6696 s
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | . stage-out = 0 s
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | . log creation = 0 s
[2025-06-04 07:55:35] 2025-06-04 05:55:16,384 | INFO     | ..............................
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | 
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | job summary report
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | --------------------------------------------------
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | PanDA job id: 6677920548
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | task id: 45006595
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | errors: (none)
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | pilot state: finished 
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | transexitcode: 0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | exeerrorcode: 0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | exeerrordiag: 
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | exitcode: 0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,414 | INFO     | exitmsg: OK
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | cpuconsumptiontime: 13053 s
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | nevents: 400
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | neventsw: 0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | pid: 1396710
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | pgrp: 1396710
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | corecount: 2
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | event service: False
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | sizes: {0: 2405187, 7: 2405393, 10: 2405421, 6707: 2441461, 6711: 2441461, 6721: 2441631}
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | --------------------------------------------------
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | 
[2025-06-04 07:55:35] 2025-06-04 05:55:16,415 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | job 6677920548 has completed (purged errors)
[2025-06-04 07:55:35] 2025-06-04 05:55:16,426 | INFO     | overall cleanup function is called
[2025-06-04 07:55:35] 2025-06-04 05:55:17,432 | INFO     | --- collectZombieJob: --- 10, [1396710]
[2025-06-04 07:55:35] 2025-06-04 05:55:17,433 | INFO     | zombie collector waiting for pid 1396710
[2025-06-04 07:55:35] 2025-06-04 05:55:17,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:55:35] 2025-06-04 05:55:17,433 | INFO     | collected zombie processes
[2025-06-04 07:55:35] 2025-06-04 05:55:17,433 | INFO     | will attempt to kill all subprocesses of pid=1396710
[2025-06-04 07:55:35] 2025-06-04 05:55:17,475 | INFO     | process IDs to be killed: [1396710] (in reverse order)
[2025-06-04 07:55:35] 2025-06-04 05:55:17,497 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:55:35] 2025-06-04 05:55:17,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:55:35] 2025-06-04 05:55:17,498 | INFO     | did not find any defunct processes belonging to 1396710
[2025-06-04 07:55:35] 2025-06-04 05:55:17,499 | INFO     | did not find any defunct processes belonging to 1396710
[2025-06-04 07:55:35] 2025-06-04 05:55:17,499 | INFO     | ready for new job
[2025-06-04 07:55:35] 2025-06-04 05:55:17,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:55:35] 2025-06-04 05:55:17,500 | INFO     | **************************************
[2025-06-04 07:55:35] 2025-06-04 05:55:17,500 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:55:35] 2025-06-04 05:55:17,500 | INFO     | **************************************
[2025-06-04 07:55:35] 2025-06-04 05:55:17,500 | INFO     | 
[2025-06-04 07:55:35] 2025-06-04 05:55:17,500 | INFO     | architecture information:
[2025-06-04 07:55:35] 2025-06-04 05:55:17,500 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:55:35] 2025-06-04 05:55:17,509 | INFO     | cat /etc/os-release:
[2025-06-04 07:55:35] NAME="CentOS Linux"
[2025-06-04 07:55:35] VERSION="7 (Core)"
[2025-06-04 07:55:35] ID="centos"
[2025-06-04 07:55:35] ID_LIKE="rhel fedora"
[2025-06-04 07:55:35] VERSION_ID="7"
[2025-06-04 07:55:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:55:35] ANSI_COLOR="0;31"
[2025-06-04 07:55:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:55:35] HOME_URL="https://www.centos.org/"
[2025-06-04 07:55:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:55:35] 
[2025-06-04 07:55:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:55:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:55:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:55:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:55:35] 
[2025-06-04 07:55:35] 2025-06-04 05:55:17,509 | INFO     | **************************************
[2025-06-04 07:55:35] 2025-06-04 05:55:18,012 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 07:55:35] 2025-06-04 05:55:18,024 | INFO     | sufficient remaining disk space (223351930880 B)
[2025-06-04 07:55:35] 2025-06-04 05:55:18,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:55:35] 2025-06-04 05:55:18,024 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:55:35] 2025-06-04 05:55:18,024 | INFO     | update_server=False
[2025-06-04 07:55:35] 2025-06-04 05:55:18,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:55:35] 2025-06-04 05:55:18,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:55:35] 2025-06-04 05:55:18,227 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:55:35] 2025-06-04 05:55:18,227 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:55:35] 2025-06-04 05:55:18,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:55:35] 2025-06-04 05:55:18,228 | INFO     | will abort loop
[2025-06-04 07:55:35] 2025-06-04 05:55:18,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:55:35] 2025-06-04 05:55:18,503 | INFO     | all data control threads have been joined
[2025-06-04 07:55:35] 2025-06-04 05:55:18,744 | INFO     | all payload control threads have been joined
[2025-06-04 07:55:35] 2025-06-04 05:55:19,029 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:19,030 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:19,083 | INFO     | PID=1390246 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 07:55:35] 2025-06-04 05:55:19,083 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:55:35] 2025-06-04 05:55:19,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:55:35] 2025-06-04 05:55:19,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:55:35] 2025-06-04 05:55:19,233 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:19,509 | INFO     | [data] control thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:19,594 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:19,703 | INFO     | all job control threads have been joined
[2025-06-04 07:55:35] 2025-06-04 05:55:19,750 | INFO     | [payload] control thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:19,811 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:19,890 | INFO     | [job] validate thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:19,909 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:20,063 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:20,093 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:20,212 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:20,385 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:20,709 | INFO     | [job] control thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:21,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:55:35] 2025-06-04 05:55:25,405 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:28,417 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:55:35] 2025-06-04 05:55:29,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:55:35] 2025-06-04 05:55:30,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139919652788032)>', '<ExcThread(monitor, started 139918986684160)>']
[2025-06-04 07:55:35] 2025-06-04 05:55:30,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:55:35] 2025-06-04 05:55:30,137 | INFO     | [monitor] control thread has ended
[2025-06-04 07:55:35] 2025-06-04 05:55:35,105 | INFO     | all workflow threads have been joined
[2025-06-04 07:55:35] 2025-06-04 05:55:35,106 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:55:35] 2025-06-04 05:55:35,106 | INFO     | traces error code: 0
[2025-06-04 07:55:35] 2025-06-04 05:55:35,107 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:55:35] 2025-06-04 05:55:35,148 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:55:35] 2025-06-04 05:55:35,151 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:55:35] 2025-06-04 05:55:35,153 [wrapper] pilotpid: 1390246
[2025-06-04 07:55:35] 2025-06-04 05:55:35,156 [wrapper] Pilot exit status: 0
[2025-06-04 07:55:35] 2025-06-04 05:55:35,163 [wrapper] pandaids: 6677920548
[2025-06-04 07:55:35] 2025-06-04 05:55:35,177 [wrapper] cleanup supervisor_pilot 1411211 1390247
[2025-06-04 07:55:35] 2025-06-04 05:55:35,179 [wrapper] Test setup, not cleaning
[2025-06-04 07:55:35] 2025-06-04 05:55:35,181 [wrapper] apfmon messages muted
[2025-06-04 07:55:35] 2025-06-04 05:55:35,183 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:55:35] 2025-06-04 05:55:35,185 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:55:35]  *** Error codes and diagnostics ***
[2025-06-04 07:55:35]     "exeErrorCode": 0,
[2025-06-04 07:55:35]     "exeErrorDiag": "",
[2025-06-04 07:55:35]     "pilotErrorCode": 0,
[2025-06-04 07:55:35]     "pilotErrorDiag": "",
[2025-06-04 07:55:35]  *** Listing of results directory ***
[2025-06-04 07:55:35] total 390952
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:26 queuedata.json
[2025-06-04 07:55:35] -rwx------ 1 boinc boinc     37140 Jun  3 20:27 runpilot2-wrapper.sh
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc       100 Jun  4 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:55:35] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 06:02 run_atlas
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc       105 Jun  4 06:02 job.xml
[2025-06-04 07:55:35] -rw-r--r-- 2 boinc boinc 216310087 Jun  4 06:02 EVNT.45006593._001689.pool.root.1
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc      6689 Jun  4 06:02 init_data.xml
[2025-06-04 07:55:35] drwxrwx--x 2 boinc boinc      4096 Jun  4 06:02 shared
[2025-06-04 07:55:35] -rw-r--r-- 2 boinc boinc    508883 Jun  4 06:02 input.tar.gz
[2025-06-04 07:55:35] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:02 start_atlas.sh
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc         0 Jun  4 06:02 boinc_lockfile
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc      2525 Jun  4 06:02 pandaJob.out
[2025-06-04 07:55:35] -rw------- 1 boinc boinc    986077 Jun  4 06:02 agis_schedconf.cvmfs.json
[2025-06-04 07:55:35] -rw------- 1 boinc boinc   1603667 Jun  4 06:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:55:35] drwx------ 4 boinc boinc      4096 Jun  4 06:02 pilot3
[2025-06-04 07:55:35] -rw------- 1 boinc boinc        95 Jun  4 07:54 pilot_heartbeat.json
[2025-06-04 07:55:35] -rw------- 1 boinc boinc 178464136 Jun  4 07:54 HITS.45006595._042100.pool.root.1
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc       529 Jun  4 07:54 boinc_task_state.xml
[2025-06-04 07:55:35] -rw------- 1 boinc boinc      1020 Jun  4 07:54 memory_monitor_summary.json
[2025-06-04 07:55:35] -rw------- 1 boinc boinc    222502 Jun  4 07:55 log.45006595._042100.job.log.tgz.1
[2025-06-04 07:55:35] -rw------- 1 boinc boinc      7656 Jun  4 07:55 heartbeat.json
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc      8192 Jun  4 07:55 boinc_mmap_file
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc        27 Jun  4 07:55 wrapper_checkpoint.txt
[2025-06-04 07:55:35] -rw------- 1 boinc boinc      4934 Jun  4 07:55 pilotlog.txt
[2025-06-04 07:55:35] -rw------- 1 boinc boinc    638938 Jun  4 07:55 log.45006595._042100.job.log.1
[2025-06-04 07:55:35] -rw------- 1 boinc boinc       357 Jun  4 07:55 output.list
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc       620 Jun  4 07:55 runtime_log
[2025-06-04 07:55:35] -rw------- 1 boinc boinc    880640 Jun  4 07:55 result.tar.gz
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc      8733 Jun  4 07:55 runtime_log.err
[2025-06-04 07:55:35] -rw------- 1 boinc boinc       659 Jun  4 07:55 2jOODmNXlg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYelKDmKfhdVn.diag
[2025-06-04 07:55:35] -rw-r--r-- 1 boinc boinc     21071 Jun  4 07:55 stderr.txt
[2025-06-04 07:55:35] HITS file was successfully produced:
[2025-06-04 07:55:35] -rw------- 1 boinc boinc 178464136 Jun  4 07:54 shared/HITS.pool.root.1
[2025-06-04 07:55:35]  *** Contents of shared directory: ***
[2025-06-04 07:55:35] total 386912
[2025-06-04 07:55:35] -rw-r--r-- 2 boinc boinc 216310087 Jun  4 06:02 ATLAS.root_0
[2025-06-04 07:55:35] -rw-r--r-- 2 boinc boinc    508883 Jun  4 06:02 input.tar.gz
[2025-06-04 07:55:35] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:02 start_atlas.sh
[2025-06-04 07:55:35] -rw------- 1 boinc boinc 178464136 Jun  4 07:54 HITS.pool.root.1
[2025-06-04 07:55:35] -rw------- 1 boinc boinc    880640 Jun  4 07:55 result.tar.gz
07:55:36 (1386620): run_atlas exited; CPU time 13085.194164
07:55:36 (1386620): called boinc_finish(0)

</stderr_txt>
]]>

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