Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:19:30 (1581422): wrapper (7.7.26015): starting
10:19:30 (1581422): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 10:19:30] Arguments: --nthreads 4
[2025-06-05 10:19:30] Threads: 4
[2025-06-05 10:19:30] Checking for CVMFS
[2025-06-05 10:19:30] No cvmfs_config command found, will try listing directly
[2025-06-05 10:19:30] CVMFS is ok
[2025-06-05 10:19:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:19:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:19:30] Further information can be found at the LHC@home message board.
[2025-06-05 10:19:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:19:30] Checking for apptainer binary...
[2025-06-05 10:19:30] which: no apptainer in ((null))
[2025-06-05 10:19:30] apptainer is not installed, using version from CVMFS
[2025-06-05 10:19:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:19:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-06-05 10:19:30] apptainer works
[2025-06-05 10:19:30] Set ATHENA_PROC_NUMBER=4
[2025-06-05 10:19:30] Set ATHENA_CORE_NUMBER=4
[2025-06-05 10:19:30] Starting ATLAS job with PandaID=6677785962
[2025-06-05 10:19:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:55:09]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:55:09] 2025-06-05 10:54:43,300 | INFO     | job 6677785962 has finished - writing final server update
[2025-06-05 12:55:09] 2025-06-05 10:54:43,301 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4168589/.job.ad'
[2025-06-05 12:55:09] 2025-06-05 10:54:43,301 | INFO     | total number of processed events: 400 (read)
[2025-06-05 12:55:09] 2025-06-05 10:54:43,305 | INFO     | executing command: lscpu
[2025-06-05 12:55:09] 2025-06-05 10:54:43,367 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 12:55:09] 2025-06-05 10:54:45,495 | INFO     | monitor loop #682: job 0:6677785962 is in state 'finished'
[2025-06-05 12:55:09] 2025-06-05 10:54:45,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 12:55:09] 2025-06-05 10:54:47,520 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 12:55:09] 2025-06-05 10:54:47,521 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6677785962/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:55:09] 2025-06-05 10:54:47,522 | INFO     | extracted standard info from prmon json
[2025-06-05 12:55:09] 2025-06-05 10:54:47,522 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:55:09] 2025-06-05 10:54:47,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:55:09] 2025-06-05 10:54:47,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:55:09] 2025-06-05 10:54:47,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:55:09] 2025-06-05 10:54:47,526 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:55:09] 2025-06-05 10:54:47,526 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,527 | INFO     | sum of deviations: -495528711.5000039
[2025-06-05 12:55:09] 2025-06-05 10:54:47,527 | INFO     | mean x: 1749116212.5
[2025-06-05 12:55:09] 2025-06-05 10:54:47,527 | INFO     | mean y: 2355865.7171052634
[2025-06-05 12:55:09] 2025-06-05 10:54:47,527 | INFO     | -- intersect: 798326596.5568962
[2025-06-05 12:55:09] 2025-06-05 10:54:47,527 | INFO     | intersect: 798326596.5568962
[2025-06-05 12:55:09] 2025-06-05 10:54:47,528 | INFO     | chi2: 1.5331347121853798
[2025-06-05 12:55:09] 2025-06-05 10:54:47,528 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,529 | INFO     | sum of deviations: -79119806.00000225
[2025-06-05 12:55:09] 2025-06-05 10:54:47,529 | INFO     | mean x: 1749116060.0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,529 | INFO     | mean y: 2356477.0476190476
[2025-06-05 12:55:09] 2025-06-05 10:54:47,529 | INFO     | -- intersect: 142862037.3687487
[2025-06-05 12:55:09] 2025-06-05 10:54:47,529 | INFO     | intersect: 142862037.3687487
[2025-06-05 12:55:09] 2025-06-05 10:54:47,529 | INFO     | chi2: 1.5342037693113189
[2025-06-05 12:55:09] 2025-06-05 10:54:47,529 | INFO     | current chi2=1.5342037693113189 (change=-0.0697301494410239 %)
[2025-06-05 12:55:09] 2025-06-05 10:54:47,530 | INFO     | right removable region: 146
[2025-06-05 12:55:09] 2025-06-05 10:54:47,530 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,531 | INFO     | sum of deviations: -21789305591.0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,531 | INFO     | mean x: 1749116365.0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,531 | INFO     | mean y: 2386614.231292517
[2025-06-05 12:55:09] 2025-06-05 10:54:47,531 | INFO     | -- intersect: 38697111484.010376
[2025-06-05 12:55:09] 2025-06-05 10:54:47,531 | INFO     | intersect: 38697111484.010376
[2025-06-05 12:55:09] 2025-06-05 10:54:47,531 | INFO     | chi2: 0.06515327012077557
[2025-06-05 12:55:09] 2025-06-05 10:54:47,531 | INFO     | current chi2=0.06515327012077557 (change=95.75032320363394 %)
[2025-06-05 12:55:09] 2025-06-05 10:54:47,532 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 12:55:09] 2025-06-05 10:54:47,532 | INFO     | sum of deviations: -21427767039.500004
[2025-06-05 12:55:09] 2025-06-05 10:54:47,532 | INFO     | mean x: 1749116517.5
[2025-06-05 12:55:09] 2025-06-05 10:54:47,533 | INFO     | mean y: 2386004.1619718308
[2025-06-05 12:55:09] 2025-06-05 10:54:47,533 | INFO     | -- intersect: 42218061091.62014
[2025-06-05 12:55:09] 2025-06-05 10:54:47,533 | INFO     | intersect: 42218061091.62014
[2025-06-05 12:55:09] 2025-06-05 10:54:47,533 | INFO     | chi2: 0.05543551907322314
[2025-06-05 12:55:09] 2025-06-05 10:54:47,533 | INFO     | current chi2=0.05543551907322314 (change=14.915216119679787 %)
[2025-06-05 12:55:09] 2025-06-05 10:54:47,533 | INFO     | left removable region: 20
[2025-06-05 12:55:09] 2025-06-05 10:54:47,533 | INFO     | sum of square deviations: 620244187.5
[2025-06-05 12:55:09] 2025-06-05 10:54:47,534 | INFO     | sum of deviations: -16138569706.5
[2025-06-05 12:55:09] 2025-06-05 10:54:47,534 | INFO     | mean x: 1749116639.5
[2025-06-05 12:55:09] 2025-06-05 10:54:47,534 | INFO     | mean y: 2380374.611111111
[2025-06-05 12:55:09] 2025-06-05 10:54:47,534 | INFO     | -- intersect: 45513876298.73822
[2025-06-05 12:55:09] 2025-06-05 10:54:47,534 | INFO     | intersect: 45513876298.73822
[2025-06-05 12:55:09] 2025-06-05 10:54:47,535 | INFO     | chi2: 0.051773294609501266
[2025-06-05 12:55:09] 2025-06-05 10:54:47,535 | INFO     | -- intersect: 45513876298.73822
[2025-06-05 12:55:09] 2025-06-05 10:54:47,535 | INFO     | current memory leak: -26.02 B/s (using 126 data points, chi2=0.05)
[2025-06-05 12:55:09] 2025-06-05 10:54:47,535 | INFO     | ..............................
[2025-06-05 12:55:09] 2025-06-05 10:54:47,536 | INFO     | . Timing measurements:
[2025-06-05 12:55:09] 2025-06-05 10:54:47,536 | INFO     | . get job = 0 s
[2025-06-05 12:55:09] 2025-06-05 10:54:47,536 | INFO     | . initial setup = 1 s
[2025-06-05 12:55:09] 2025-06-05 10:54:47,536 | INFO     | . payload setup = 7 s
[2025-06-05 12:55:09] 2025-06-05 10:54:47,536 | INFO     | . stage-in = 0 s
[2025-06-05 12:55:09] 2025-06-05 10:54:47,536 | INFO     | . payload execution = 9272 s
[2025-06-05 12:55:09] 2025-06-05 10:54:47,536 | INFO     | . stage-out = 0 s
[2025-06-05 12:55:09] 2025-06-05 10:54:47,536 | INFO     | . log creation = 0 s
[2025-06-05 12:55:09] 2025-06-05 10:54:47,536 | INFO     | ..............................
[2025-06-05 12:55:09] 2025-06-05 10:54:47,638 | INFO     | 
[2025-06-05 12:55:09] 2025-06-05 10:54:47,638 | INFO     | job summary report
[2025-06-05 12:55:09] 2025-06-05 10:54:47,638 | INFO     | --------------------------------------------------
[2025-06-05 12:55:09] 2025-06-05 10:54:47,638 | INFO     | PanDA job id: 6677785962
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | task id: 45006595
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | errors: (none)
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | pilot state: finished 
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | transexitcode: 0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | exeerrorcode: 0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | exeerrordiag: 
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | exitcode: 0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | exitmsg: OK
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | cpuconsumptiontime: 35109 s
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | nevents: 400
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | neventsw: 0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | pid: 1592632
[2025-06-05 12:55:09] 2025-06-05 10:54:47,639 | INFO     | pgrp: 1592632
[2025-06-05 12:55:09] 2025-06-05 10:54:47,640 | INFO     | corecount: 4
[2025-06-05 12:55:09] 2025-06-05 10:54:47,640 | INFO     | event service: False
[2025-06-05 12:55:09] 2025-06-05 10:54:47,640 | INFO     | sizes: {0: 2397181, 1: 2397380, 5: 2397586, 12: 2397642, 9283: 2425735, 9285: 2434698, 9287: 2434882, 9293: 2435052}
[2025-06-05 12:55:09] 2025-06-05 10:54:47,640 | INFO     | --------------------------------------------------
[2025-06-05 12:55:09] 2025-06-05 10:54:47,640 | INFO     | 
[2025-06-05 12:55:09] 2025-06-05 10:54:47,640 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-05 12:55:09] 2025-06-05 10:54:47,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,660 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,662 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,662 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,662 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,662 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:55:09] 2025-06-05 10:54:47,662 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,662 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:55:09] 2025-06-05 10:54:47,662 | INFO     | job 6677785962 has completed (purged errors)
[2025-06-05 12:55:09] 2025-06-05 10:54:47,662 | INFO     | overall cleanup function is called
[2025-06-05 12:55:09] 2025-06-05 10:54:48,670 | INFO     | --- collectZombieJob: --- 10, [1592632]
[2025-06-05 12:55:09] 2025-06-05 10:54:48,670 | INFO     | zombie collector waiting for pid 1592632
[2025-06-05 12:55:09] 2025-06-05 10:54:48,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:55:09] 2025-06-05 10:54:48,670 | INFO     | collected zombie processes
[2025-06-05 12:55:09] 2025-06-05 10:54:48,670 | INFO     | will attempt to kill all subprocesses of pid=1592632
[2025-06-05 12:55:09] 2025-06-05 10:54:48,999 | INFO     | process IDs to be killed: [1592632] (in reverse order)
[2025-06-05 12:55:09] 2025-06-05 10:54:49,109 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:55:09] 2025-06-05 10:54:49,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:55:09] 2025-06-05 10:54:49,120 | INFO     | did not find any defunct processes belonging to 1592632
[2025-06-05 12:55:09] 2025-06-05 10:54:49,131 | INFO     | did not find any defunct processes belonging to 1592632
[2025-06-05 12:55:09] 2025-06-05 10:54:49,132 | INFO     | ready for new job
[2025-06-05 12:55:09] 2025-06-05 10:54:49,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:55:09] 2025-06-05 10:54:49,134 | INFO     | **************************************
[2025-06-05 12:55:09] 2025-06-05 10:54:49,134 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:55:09] 2025-06-05 10:54:49,134 | INFO     | **************************************
[2025-06-05 12:55:09] 2025-06-05 10:54:49,134 | INFO     | 
[2025-06-05 12:55:09] 2025-06-05 10:54:49,138 | INFO     | architecture information:
[2025-06-05 12:55:09] 2025-06-05 10:54:49,139 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:55:09] 2025-06-05 10:54:49,154 | INFO     | cat /etc/os-release:
[2025-06-05 12:55:09] NAME="CentOS Linux"
[2025-06-05 12:55:09] VERSION="7 (Core)"
[2025-06-05 12:55:09] ID="centos"
[2025-06-05 12:55:09] ID_LIKE="rhel fedora"
[2025-06-05 12:55:09] VERSION_ID="7"
[2025-06-05 12:55:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:55:09] ANSI_COLOR="0;31"
[2025-06-05 12:55:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:55:09] HOME_URL="https://www.centos.org/"
[2025-06-05 12:55:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:55:09] 
[2025-06-05 12:55:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:55:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:55:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:55:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:55:09] 
[2025-06-05 12:55:09] 2025-06-05 10:54:49,155 | INFO     | **************************************
[2025-06-05 12:55:09] 2025-06-05 10:54:49,658 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-05 12:55:09] 2025-06-05 10:54:49,673 | INFO     | sufficient remaining disk space (662989438976 B)
[2025-06-05 12:55:09] 2025-06-05 10:54:49,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:55:09] 2025-06-05 10:54:49,674 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:55:09] 2025-06-05 10:54:49,674 | INFO     | update_server=False
[2025-06-05 12:55:09] 2025-06-05 10:54:49,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:55:09] 2025-06-05 10:54:49,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:55:09] 2025-06-05 10:54:49,675 | INFO     | aborting loop
[2025-06-05 12:55:09] 2025-06-05 10:54:49,802 | INFO     | all payload control threads have been joined
[2025-06-05 12:55:09] 2025-06-05 10:54:49,999 | INFO     | all data control threads have been joined
[2025-06-05 12:55:09] 2025-06-05 10:54:50,450 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:55:09] 2025-06-05 10:54:50,450 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:55:09] 2025-06-05 10:54:50,450 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:55:09] 2025-06-05 10:54:50,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:55:09] 2025-06-05 10:54:50,679 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:50,680 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:50,807 | INFO     | [payload] control thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:50,819 | INFO     | all job control threads have been joined
[2025-06-05 12:55:09] 2025-06-05 10:54:51,004 | INFO     | [data] control thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:51,140 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:51,308 | INFO     | [job] validate thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:51,680 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:51,692 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:51,812 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:51,821 | INFO     | [job] control thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:52,040 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:52,146 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:52,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:55:09] 2025-06-05 10:54:52,581 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:52,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:55:09] 2025-06-05 10:54:53,651 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:56,262 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:54:59,948 | INFO     | job.realtimelogging is not enabled
[2025-06-05 12:55:09] 2025-06-05 10:55:00,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:55:09] 2025-06-05 10:55:02,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23252297049920)>', '<ExcThread(monitor, started 23252057421568)>']
[2025-06-05 12:55:09] 2025-06-05 10:55:02,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:55:09] 2025-06-05 10:55:02,507 | INFO     | [monitor] control thread has ended
[2025-06-05 12:55:09] 2025-06-05 10:55:07,233 | INFO     | all workflow threads have been joined
[2025-06-05 12:55:09] 2025-06-05 10:55:07,233 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:55:09] 2025-06-05 10:55:07,234 | INFO     | traces error code: 0
[2025-06-05 12:55:09] 2025-06-05 10:55:07,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:55:09] 2025-06-05 10:55:07,380 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:55:09] 2025-06-05 10:55:07,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:55:09] 2025-06-05 10:55:07,386 [wrapper] pilotpid: 1585153
[2025-06-05 12:55:09] 2025-06-05 10:55:07,389 [wrapper] Pilot exit status: 0
[2025-06-05 12:55:09] 2025-06-05 10:55:07,399 [wrapper] pandaids: 6677785962
[2025-06-05 12:55:09] 2025-06-05 10:55:07,464 [wrapper] cleanup supervisor_pilot 1835940 1585154
[2025-06-05 12:55:09] 2025-06-05 10:55:07,468 [wrapper] Test setup, not cleaning
[2025-06-05 12:55:09] 2025-06-05 10:55:07,471 [wrapper] apfmon messages muted
[2025-06-05 12:55:09] 2025-06-05 10:55:07,474 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:55:09] 2025-06-05 10:55:07,477 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:55:09]  *** Error codes and diagnostics ***
[2025-06-05 12:55:09]     "exeErrorCode": 0,
[2025-06-05 12:55:09]     "exeErrorDiag": "",
[2025-06-05 12:55:09]     "pilotErrorCode": 0,
[2025-06-05 12:55:09]     "pilotErrorDiag": "",
[2025-06-05 12:55:09]  *** Listing of results directory ***
[2025-06-05 12:55:09] total 392568
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:01 queuedata.json
[2025-06-05 12:55:09] -rwx------ 1 boinc boinc     37140 Jun  3 19:01 runpilot2-wrapper.sh
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc       100 Jun  5 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:55:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 10:19 run_atlas
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc       105 Jun  5 10:19 job.xml
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc      6636 Jun  5 10:19 init_data.xml
[2025-06-05 12:55:09] -rw-r--r-- 2 boinc boinc 213413295 Jun  5 10:19 EVNT.45006593._001596.pool.root.1
[2025-06-05 12:55:09] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:19 start_atlas.sh
[2025-06-05 12:55:09] drwxrwx--x 2 boinc boinc      4096 Jun  5 10:19 shared
[2025-06-05 12:55:09] -rw-r--r-- 2 boinc boinc    508877 Jun  5 10:19 input.tar.gz
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc         0 Jun  5 10:19 boinc_lockfile
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc      2524 Jun  5 10:19 pandaJob.out
[2025-06-05 12:55:09] -rw------- 1 boinc boinc    983281 Jun  5 10:19 agis_schedconf.cvmfs.json
[2025-06-05 12:55:09] -rw------- 1 boinc boinc   1598969 Jun  5 10:19 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:55:09] drwx------ 4 boinc boinc      4096 Jun  5 10:19 pilot3
[2025-06-05 12:55:09] -rw------- 1 boinc boinc 182383653 Jun  5 12:54 HITS.45006595._039802.pool.root.1
[2025-06-05 12:55:09] -rw------- 1 boinc boinc        95 Jun  5 12:54 pilot_heartbeat.json
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc       528 Jun  5 12:54 boinc_task_state.xml
[2025-06-05 12:55:09] -rw------- 1 boinc boinc      1036 Jun  5 12:54 memory_monitor_summary.json
[2025-06-05 12:55:09] -rw------- 1 boinc boinc    298464 Jun  5 12:54 log.45006595._039802.job.log.tgz.1
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc        26 Jun  5 12:54 wrapper_checkpoint.txt
[2025-06-05 12:55:09] -rw------- 1 boinc boinc      7724 Jun  5 12:54 heartbeat.json
[2025-06-05 12:55:09] -rw------- 1 boinc boinc      4435 Jun  5 12:55 pilotlog.txt
[2025-06-05 12:55:09] -rw------- 1 boinc boinc    882914 Jun  5 12:55 log.45006595._039802.job.log.1
[2025-06-05 12:55:09] -rw------- 1 boinc boinc       357 Jun  5 12:55 output.list
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc       620 Jun  5 12:55 runtime_log
[2025-06-05 12:55:09] -rw------- 1 boinc boinc   1198080 Jun  5 12:55 result.tar.gz
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc      9025 Jun  5 12:55 runtime_log.err
[2025-06-05 12:55:09] -rw------- 1 boinc boinc       662 Jun  5 12:55 HEoKDmRCkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwElKDm2ejZFo.diag
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc      8192 Jun  5 12:55 boinc_mmap_file
[2025-06-05 12:55:09] -rw-r--r-- 1 boinc boinc     20915 Jun  5 12:55 stderr.txt
[2025-06-05 12:55:09] HITS file was successfully produced:
[2025-06-05 12:55:09] -rw------- 1 boinc boinc 182383653 Jun  5 12:54 shared/HITS.pool.root.1
[2025-06-05 12:55:09]  *** Contents of shared directory: ***
[2025-06-05 12:55:09] total 388220
[2025-06-05 12:55:09] -rw-r--r-- 2 boinc boinc 213413295 Jun  5 10:19 ATLAS.root_0
[2025-06-05 12:55:09] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:19 start_atlas.sh
[2025-06-05 12:55:09] -rw-r--r-- 2 boinc boinc    508877 Jun  5 10:19 input.tar.gz
[2025-06-05 12:55:09] -rw------- 1 boinc boinc 182383653 Jun  5 12:54 HITS.pool.root.1
[2025-06-05 12:55:09] -rw------- 1 boinc boinc   1198080 Jun  5 12:55 result.tar.gz
12:55:10 (1581422): run_atlas exited; CPU time 35455.257846
12:55:10 (1581422): called boinc_finish(0)

</stderr_txt>
]]>

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