Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:34:35 (907222): wrapper (7.7.26015): starting
15:34:35 (907222): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:34:35] Arguments: --nthreads 8
[2025-06-03 15:34:35] Threads: 8
[2025-06-03 15:34:35] Checking for CVMFS
[2025-06-03 15:34:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:34:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:34:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:34:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:34:35] 2.12.6.0 4820 324 71556 146753 0 187 18505855 32935937 3664 16776704 0 1521036 99.998 80707 44368 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 15:34:35] CVMFS is ok
[2025-06-03 15:34:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:34:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:34:35] Further information can be found at the LHC@home message board.
[2025-06-03 15:34:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:34:35] Checking for apptainer binary...
[2025-06-03 15:34:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:34:35] Running /usr/bin/apptainer --version
[2025-06-03 15:34:35] apptainer version 1.4.1-1.el9
[2025-06-03 15:34:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:34:35] c-8-32.aglt2.org
[2025-06-03 15:34:35] apptainer works
[2025-06-03 15:34:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:34:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:34:36] Starting ATLAS job with PandaID=6677783111
[2025-06-03 15:34:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:07:04]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:07:04]  filetype=log
[2025-06-03 17:07:04]  guid=dac60007-b617-47ef-a4e4-416d37ad8546
[2025-06-03 17:07:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 17:07:04]  is_altstaged=None
[2025-06-03 17:07:04]  is_tar=False
[2025-06-03 17:07:04]  lfn=log.45006595._039075.job.log.tgz.1
[2025-06-03 17:07:04]  mtime=0
[2025-06-03 17:07:04]  protocol_id=None
[2025-06-03 17:07:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 17:07:04]  replicas=None
[2025-06-03 17:07:04]  scope=mc23_13p6TeV
[2025-06-03 17:07:04]  status=None
[2025-06-03 17:07:04]  status_code=0
[2025-06-03 17:07:04]  storage_token=
[2025-06-03 17:07:04]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677783111/log.45006595._039075.job.log.tgz.1
[2025-06-03 17:07:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/80/log.45006595._039075.job.log.tgz.1
[2025-06-03 17:07:04]  workdir=None
[2025-06-03 17:07:04] ]
[2025-06-03 17:07:04] 2025-06-03 21:06:46,317 | INFO     | transferring file log.45006595._039075.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677783111/log.45006595._039075.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 17:07:04] 2025-06-03 21:06:46,317 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677783111/log.45006595._039075.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._039075.job
[2025-06-03 17:07:04] 2025-06-03 21:06:46,336 | INFO     | adding to output.list: log.45006595._039075.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/80/log.45006595._039075.job.log.tg
[2025-06-03 17:07:04] 2025-06-03 21:06:46,338 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 17:07:04] 2025-06-03 21:06:46,338 | INFO     | summary of transferred files:
[2025-06-03 17:07:04] 2025-06-03 21:06:46,338 | INFO     |  -- lfn=log.45006595._039075.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 17:07:04] 2025-06-03 21:06:46,339 | INFO     | stage-out finished correctly
[2025-06-03 17:07:04] 2025-06-03 21:06:46,777 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 17:07:04] 2025-06-03 21:06:46,875 | INFO     | job 6677783111 has state=finished
[2025-06-03 17:07:04] 2025-06-03 21:06:46,876 | INFO     | preparing for final server update for job 6677783111 in state='finished'
[2025-06-03 17:07:04] 2025-06-03 21:06:46,877 | INFO     | this job has now completed (state=finished)
[2025-06-03 17:07:04] 2025-06-03 21:06:46,877 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 17:07:04] 2025-06-03 21:06:46,877 | INFO     | log transfer has been attempted: DONE
[2025-06-03 17:07:04] 2025-06-03 21:06:46,877 | INFO     | job 6677783111 has finished - writing final server update
[2025-06-03 17:07:04] 2025-06-03 21:06:46,878 | INFO     | total number of processed events: 400 (read)
[2025-06-03 17:07:04] 2025-06-03 21:06:46,894 | INFO     | executing command: lscpu
[2025-06-03 17:07:04] 2025-06-03 21:06:46,956 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 17:07:04] 2025-06-03 21:06:48,482 | INFO     | monitor loop #403: job 0:6677783111 is in state 'finished'
[2025-06-03 17:07:04] 2025-06-03 21:06:48,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:07:04] 2025-06-03 21:06:50,986 | INFO     | monitor loop #404: job 0:6677783111 is in state 'finished'
[2025-06-03 17:07:04] 2025-06-03 21:06:50,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:07:04] 2025-06-03 21:06:51,609 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 17:07:04] 2025-06-03 21:06:51,610 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677783111/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:07:04] 2025-06-03 21:06:51,611 | INFO     | extracted standard info from prmon json
[2025-06-03 17:07:04] 2025-06-03 21:06:51,611 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:07:04] 2025-06-03 21:06:51,611 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:07:04] 2025-06-03 21:06:51,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:07:04] 2025-06-03 21:06:51,612 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:07:04] 2025-06-03 21:06:51,615 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:07:04] 2025-06-03 21:06:51,615 | INFO     | sum of square deviations: 177275882.0
[2025-06-03 17:07:04] 2025-06-03 21:06:51,616 | INFO     | sum of deviations: 11507047869.0
[2025-06-03 17:07:04] 2025-06-03 21:06:51,616 | INFO     | mean x: 1748982117.0
[2025-06-03 17:07:04] 2025-06-03 21:06:51,616 | INFO     | mean y: 2134839.481927711
[2025-06-03 17:07:04] 2025-06-03 21:06:51,616 | INFO     | -- intersect: -113524988620.79765
[2025-06-03 17:07:04] 2025-06-03 21:06:51,616 | INFO     | intersect: -113524988620.79765
[2025-06-03 17:07:04] 2025-06-03 21:06:51,617 | INFO     | chi2: 1.436030733533408
[2025-06-03 17:07:04] 2025-06-03 21:06:51,617 | INFO     | -- intersect: -113524988620.79765
[2025-06-03 17:07:04] 2025-06-03 21:06:51,617 | INFO     | current memory leak: 64.91 B/s (using 83 data points, chi2=1.44)
[2025-06-03 17:07:04] 2025-06-03 21:06:51,618 | INFO     | ..............................
[2025-06-03 17:07:04] 2025-06-03 21:06:51,618 | INFO     | . Timing measurements:
[2025-06-03 17:07:04] 2025-06-03 21:06:51,618 | INFO     | . get job = 0 s
[2025-06-03 17:07:04] 2025-06-03 21:06:51,618 | INFO     | . initial setup = 2 s
[2025-06-03 17:07:04] 2025-06-03 21:06:51,618 | INFO     | . payload setup = 6 s
[2025-06-03 17:07:04] 2025-06-03 21:06:51,618 | INFO     | . stage-in = 0 s
[2025-06-03 17:07:04] 2025-06-03 21:06:51,618 | INFO     | . payload execution = 5493 s
[2025-06-03 17:07:04] 2025-06-03 21:06:51,618 | INFO     | . stage-out = 1 s
[2025-06-03 17:07:04] 2025-06-03 21:06:51,619 | INFO     | . log creation = 0 s
[2025-06-03 17:07:04] 2025-06-03 21:06:51,619 | INFO     | ..............................
[2025-06-03 17:07:04] 2025-06-03 21:06:51,734 | INFO     | 
[2025-06-03 17:07:04] 2025-06-03 21:06:51,734 | INFO     | job summary report
[2025-06-03 17:07:04] 2025-06-03 21:06:51,734 | INFO     | --------------------------------------------------
[2025-06-03 17:07:04] 2025-06-03 21:06:51,734 | INFO     | PanDA job id: 6677783111
[2025-06-03 17:07:04] 2025-06-03 21:06:51,734 | INFO     | task id: 45006595
[2025-06-03 17:07:04] 2025-06-03 21:06:51,735 | INFO     | errors: (none)
[2025-06-03 17:07:04] 2025-06-03 21:06:51,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:07:04] 2025-06-03 21:06:51,735 | INFO     | pilot state: finished 
[2025-06-03 17:07:04] 2025-06-03 21:06:51,735 | INFO     | transexitcode: 0
[2025-06-03 17:07:04] 2025-06-03 21:06:51,735 | INFO     | exeerrorcode: 0
[2025-06-03 17:07:04] 2025-06-03 21:06:51,735 | INFO     | exeerrordiag: 
[2025-06-03 17:07:04] 2025-06-03 21:06:51,735 | INFO     | exitcode: 0
[2025-06-03 17:07:04] 2025-06-03 21:06:51,735 | INFO     | exitmsg: OK
[2025-06-03 17:07:04] 2025-06-03 21:06:51,735 | INFO     | cpuconsumptiontime: 37301 s
[2025-06-03 17:07:04] 2025-06-03 21:06:51,736 | INFO     | nevents: 400
[2025-06-03 17:07:04] 2025-06-03 21:06:51,736 | INFO     | neventsw: 0
[2025-06-03 17:07:04] 2025-06-03 21:06:51,736 | INFO     | pid: 917686
[2025-06-03 17:07:04] 2025-06-03 21:06:51,736 | INFO     | pgrp: 917686
[2025-06-03 17:07:04] 2025-06-03 21:06:51,736 | INFO     | corecount: 8
[2025-06-03 17:07:04] 2025-06-03 21:06:51,736 | INFO     | event service: False
[2025-06-03 17:07:04] 2025-06-03 21:06:51,736 | INFO     | sizes: {0: 2405184, 1: 2405184, 4: 2405418, 11: 2405446, 5503: 2431906, 5505: 2440847, 5506: 2441031, 5510: 2441201}
[2025-06-03 17:07:04] 2025-06-03 21:06:51,736 | INFO     | --------------------------------------------------
[2025-06-03 17:07:04] 2025-06-03 21:06:51,736 | INFO     | 
[2025-06-03 17:07:04] 2025-06-03 21:06:51,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 17:07:04] 2025-06-03 21:06:51,756 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,757 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,757 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,757 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,758 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,758 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,758 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,758 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,758 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,759 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:07:04] 2025-06-03 21:06:51,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,759 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:07:04] 2025-06-03 21:06:51,759 | INFO     | job 6677783111 has completed (purged errors)
[2025-06-03 17:07:04] 2025-06-03 21:06:51,760 | INFO     | overall cleanup function is called
[2025-06-03 17:07:04] 2025-06-03 21:06:52,768 | INFO     | --- collectZombieJob: --- 10, [917686]
[2025-06-03 17:07:04] 2025-06-03 21:06:52,768 | INFO     | zombie collector waiting for pid 917686
[2025-06-03 17:07:04] 2025-06-03 21:06:52,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:07:04] 2025-06-03 21:06:52,769 | INFO     | collected zombie processes
[2025-06-03 17:07:04] 2025-06-03 21:06:52,769 | INFO     | will attempt to kill all subprocesses of pid=917686
[2025-06-03 17:07:04] 2025-06-03 21:06:53,048 | INFO     | process IDs to be killed: [917686] (in reverse order)
[2025-06-03 17:07:04] 2025-06-03 21:06:53,128 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:07:04] 2025-06-03 21:06:53,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:07:04] 2025-06-03 21:06:53,137 | INFO     | did not find any defunct processes belonging to 917686
[2025-06-03 17:07:04] 2025-06-03 21:06:53,145 | INFO     | did not find any defunct processes belonging to 917686
[2025-06-03 17:07:04] 2025-06-03 21:06:53,145 | INFO     | ready for new job
[2025-06-03 17:07:04] 2025-06-03 21:06:53,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:07:04] 2025-06-03 21:06:53,147 | INFO     | **************************************
[2025-06-03 17:07:04] 2025-06-03 21:06:53,148 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:07:04] 2025-06-03 21:06:53,148 | INFO     | **************************************
[2025-06-03 17:07:04] 2025-06-03 21:06:53,148 | INFO     | 
[2025-06-03 17:07:04] 2025-06-03 21:06:53,163 | INFO     | architecture information:
[2025-06-03 17:07:04] 2025-06-03 21:06:53,163 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:07:04] 2025-06-03 21:06:53,178 | INFO     | cat /etc/os-release:
[2025-06-03 17:07:04] NAME="CentOS Linux"
[2025-06-03 17:07:04] VERSION="7 (Core)"
[2025-06-03 17:07:04] ID="centos"
[2025-06-03 17:07:04] ID_LIKE="rhel fedora"
[2025-06-03 17:07:04] VERSION_ID="7"
[2025-06-03 17:07:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:07:04] ANSI_COLOR="0;31"
[2025-06-03 17:07:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:07:04] HOME_URL="https://www.centos.org/"
[2025-06-03 17:07:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:07:04] 
[2025-06-03 17:07:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:07:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:07:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:07:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:07:04] 
[2025-06-03 17:07:04] 2025-06-03 21:06:53,178 | INFO     | **************************************
[2025-06-03 17:07:04] 2025-06-03 21:06:53,681 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 17:07:04] 2025-06-03 21:06:53,698 | INFO     | sufficient remaining disk space (74816946176 B)
[2025-06-03 17:07:04] 2025-06-03 21:06:53,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:07:04] 2025-06-03 21:06:53,698 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:07:04] 2025-06-03 21:06:53,698 | INFO     | update_server=False
[2025-06-03 17:07:04] 2025-06-03 21:06:53,699 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:07:04] 2025-06-03 21:06:53,699 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:07:04] 2025-06-03 21:06:53,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:07:04] 2025-06-03 21:06:53,793 | INFO     | all data control threads have been joined
[2025-06-03 17:07:04] 2025-06-03 21:06:54,194 | INFO     | all job control threads have been joined
[2025-06-03 17:07:04] 2025-06-03 21:06:54,195 | INFO     | PID=910800 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 17:07:04] 2025-06-03 21:06:54,195 | INFO     | .. there are 5 such processes running
[2025-06-03 17:07:04] 2025-06-03 21:06:54,196 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:07:04] 2025-06-03 21:06:54,196 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:07:04] 2025-06-03 21:06:54,196 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:07:04] 2025-06-03 21:06:54,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:07:04] 2025-06-03 21:06:54,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:07:04] 2025-06-03 21:06:54,495 | INFO     | aborting loop
[2025-06-03 17:07:04] 2025-06-03 21:06:54,704 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:54,705 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:54,740 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:54,798 | INFO     | [data] control thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:54,808 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:55,003 | INFO     | all payload control threads have been joined
[2025-06-03 17:07:04] 2025-06-03 21:06:55,094 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:55,098 | INFO     | [job] validate thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:55,200 | INFO     | [job] control thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:55,407 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:55,500 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:55,682 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:56,008 | INFO     | [payload] control thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:56,181 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:56,206 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:56,476 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:57,705 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:07:04] 2025-06-03 21:06:59,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140372729882432)>', '<ExcThread(monitor, started 140371946370816)>']
[2025-06-03 17:07:04] 2025-06-03 21:06:59,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:07:04] 2025-06-03 21:06:59,222 | INFO     | [monitor] control thread has ended
[2025-06-03 17:07:04] 2025-06-03 21:07:04,170 | INFO     | all workflow threads have been joined
[2025-06-03 17:07:04] 2025-06-03 21:07:04,170 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:07:04] 2025-06-03 21:07:04,171 | INFO     | traces error code: 0
[2025-06-03 17:07:04] 2025-06-03 21:07:04,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:07:04] 2025-06-03 21:07:04,262 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:07:04] 2025-06-03 21:07:04,265 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:07:04] 2025-06-03 21:07:04,269 [wrapper] pilotpid: 910800
[2025-06-03 17:07:04] 2025-06-03 21:07:04,272 [wrapper] Pilot exit status: 0
[2025-06-03 17:07:04] 2025-06-03 21:07:04,284 [wrapper] pandaids: 6677783111
[2025-06-03 17:07:04] 2025-06-03 21:07:04,339 [wrapper] cleanup supervisor_pilot 1146397 910801
[2025-06-03 17:07:04] 2025-06-03 21:07:04,343 [wrapper] Test setup, not cleaning
[2025-06-03 17:07:04] 2025-06-03 21:07:04,346 [wrapper] apfmon messages muted
[2025-06-03 17:07:04] 2025-06-03 21:07:04,350 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:07:04] 2025-06-03 21:07:04,353 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:07:04]  *** Error codes and diagnostics ***
[2025-06-03 17:07:04]     "exeErrorCode": 0,
[2025-06-03 17:07:04]     "exeErrorDiag": "",
[2025-06-03 17:07:04]     "pilotErrorCode": 0,
[2025-06-03 17:07:04]     "pilotErrorDiag": "",
[2025-06-03 17:07:04]  *** Listing of results directory ***
[2025-06-03 17:07:04] total 386888
[2025-06-03 17:07:04] -rwx------. 1 boincer umatlas     37140 Jun  3 12:42 runpilot2-wrapper.sh
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:42 queuedata.json
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:42 pilot3.tar.gz
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas       100 Jun  3 15:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:07:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 15:34 run_atlas
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas       105 Jun  3 15:34 job.xml
[2025-06-03 17:07:04] -rw-r--r--. 2 boincer umatlas 216968742 Jun  3 15:34 EVNT.45006593._001567.pool.root.1
[2025-06-03 17:07:04] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 15:34 input.tar.gz
[2025-06-03 17:07:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 15:34 start_atlas.sh
[2025-06-03 17:07:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 15:34 shared
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas         0 Jun  3 15:34 boinc_lockfile
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 15:34 pandaJob.out
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas    986893 Jun  3 15:34 agis_schedconf.cvmfs.json
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas   1603667 Jun  3 15:34 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:07:04] drwx------. 4 boincer umatlas      4096 Jun  3 15:34 pilot3
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas      6708 Jun  3 17:04 init_data.xml
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas       530 Jun  3 17:06 boinc_task_state.xml
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas 173668187 Jun  3 17:06 HITS.45006595._039075.pool.root.1
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas        95 Jun  3 17:06 pilot_heartbeat.json
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas      1032 Jun  3 17:06 memory_monitor_summary.json
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas    318533 Jun  3 17:06 log.45006595._039075.job.log.tgz.1
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas      7708 Jun  3 17:06 heartbeat.json
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:06 boinc_mmap_file
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas        27 Jun  3 17:07 wrapper_checkpoint.txt
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas      4747 Jun  3 17:07 pilotlog.txt
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas    529749 Jun  3 17:07 log.45006595._039075.job.log.1
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas       357 Jun  3 17:07 output.list
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas       620 Jun  3 17:07 runtime_log
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas    870400 Jun  3 17:07 result.tar.gz
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas       650 Jun  3 17:07 aVcNDmUtjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaIZKDme49Ofm.diag
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 17:07 runtime_log.err
[2025-06-03 17:07:04] -rw-r--r--. 1 boincer umatlas     21275 Jun  3 17:07 stderr.txt
[2025-06-03 17:07:04] HITS file was successfully produced:
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas 173668187 Jun  3 17:06 shared/HITS.pool.root.1
[2025-06-03 17:07:04]  *** Contents of shared directory: ***
[2025-06-03 17:07:04] total 382860
[2025-06-03 17:07:04] -rw-r--r--. 2 boincer umatlas 216968742 Jun  3 15:34 ATLAS.root_0
[2025-06-03 17:07:04] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 15:34 input.tar.gz
[2025-06-03 17:07:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 15:34 start_atlas.sh
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas 173668187 Jun  3 17:06 HITS.pool.root.1
[2025-06-03 17:07:04] -rw-------. 1 boincer umatlas    870400 Jun  3 17:07 result.tar.gz
17:07:05 (907222): run_atlas exited; CPU time 37408.079623
17:07:05 (907222): called boinc_finish(0)

</stderr_txt>
]]>

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