Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:32:33 (4695): wrapper (7.7.26015): starting
15:32:33 (4695): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:32:33] Arguments: --nthreads 8
[2025-06-03 15:32:33] Threads: 8
[2025-06-03 15:32:33] Checking for CVMFS
[2025-06-03 15:32:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:32:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:32:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:32:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:32:33] 2.11.2.0 2979 34619 73880 146753 0 55 12852174 20275200 1 130560 0 10801598 99.981 5604699 7035 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 15:32:33] CVMFS is ok
[2025-06-03 15:32:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:32:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:32:33] Further information can be found at the LHC@home message board.
[2025-06-03 15:32:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:32:33] Checking for apptainer binary...
[2025-06-03 15:32:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:32:33] Running /usr/bin/apptainer --version
[2025-06-03 15:32:33] apptainer version 1.3.2-1.el7
[2025-06-03 15:32:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:32:35] c-115-8.aglt2.org
[2025-06-03 15:32:35] apptainer works
[2025-06-03 15:32:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:32:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:32:35] Starting ATLAS job with PandaID=6677785727
[2025-06-03 15:32:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:11:42]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:11:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 17:11:42]  is_altstaged=None
[2025-06-03 17:11:42]  is_tar=False
[2025-06-03 17:11:42]  lfn=log.45006595._039593.job.log.tgz.1
[2025-06-03 17:11:42]  mtime=0
[2025-06-03 17:11:42]  protocol_id=None
[2025-06-03 17:11:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 17:11:42]  replicas=None
[2025-06-03 17:11:42]  scope=mc23_13p6TeV
[2025-06-03 17:11:42]  status=None
[2025-06-03 17:11:42]  status_code=0
[2025-06-03 17:11:42]  storage_token=
[2025-06-03 17:11:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677785727/log.45006595._039593.job.log.tgz.1
[2025-06-03 17:11:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/81/log.45006595._039593.job.log.tgz.1
[2025-06-03 17:11:42]  workdir=None
[2025-06-03 17:11:42] ]
[2025-06-03 17:11:42] 2025-06-03 21:11:14,011 | INFO     | transferring file log.45006595._039593.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677785727/log.45006595._039593.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 17:11:42] 2025-06-03 21:11:14,013 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677785727/log.45006595._039593.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._039593.job
[2025-06-03 17:11:42] 2025-06-03 21:11:14,041 | INFO     | adding to output.list: log.45006595._039593.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/81/log.45006595._039593.job.log.tg
[2025-06-03 17:11:42] 2025-06-03 21:11:14,043 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 17:11:42] 2025-06-03 21:11:14,043 | INFO     | summary of transferred files:
[2025-06-03 17:11:42] 2025-06-03 21:11:14,043 | INFO     |  -- lfn=log.45006595._039593.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 17:11:42] 2025-06-03 21:11:14,044 | INFO     | stage-out finished correctly
[2025-06-03 17:11:42] 2025-06-03 21:11:15,924 | INFO     | monitor loop #438: job 0:6677785727 is in state 'finished'
[2025-06-03 17:11:42] 2025-06-03 21:11:15,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:11:42] 2025-06-03 21:11:16,094 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 17:11:42] 2025-06-03 21:11:16,696 | INFO     | job 6677785727 has state=finished
[2025-06-03 17:11:42] 2025-06-03 21:11:16,696 | INFO     | preparing for final server update for job 6677785727 in state='finished'
[2025-06-03 17:11:42] 2025-06-03 21:11:16,697 | INFO     | this job has now completed (state=finished)
[2025-06-03 17:11:42] 2025-06-03 21:11:16,697 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 17:11:42] 2025-06-03 21:11:16,697 | INFO     | log transfer has been attempted: DONE
[2025-06-03 17:11:42] 2025-06-03 21:11:16,698 | INFO     | job 6677785727 has finished - writing final server update
[2025-06-03 17:11:42] 2025-06-03 21:11:16,698 | INFO     | total number of processed events: 400 (read)
[2025-06-03 17:11:42] 2025-06-03 21:11:16,700 | INFO     | executing command: lscpu
[2025-06-03 17:11:42] 2025-06-03 21:11:16,730 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 17:11:42] 2025-06-03 21:11:18,428 | INFO     | monitor loop #439: job 0:6677785727 is in state 'finished'
[2025-06-03 17:11:42] 2025-06-03 21:11:18,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:11:42] 2025-06-03 21:11:18,807 | INFO     | PID=8354 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 17:11:42] 2025-06-03 21:11:20,930 | INFO     | monitor loop #440: job 0:6677785727 is in state 'finished'
[2025-06-03 17:11:42] 2025-06-03 21:11:20,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:11:42] 2025-06-03 21:11:22,467 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 17:11:42] 2025-06-03 21:11:22,468 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677785727/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:11:42] 2025-06-03 21:11:22,469 | INFO     | extracted standard info from prmon json
[2025-06-03 17:11:42] 2025-06-03 21:11:22,470 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:11:42] 2025-06-03 21:11:22,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:11:42] 2025-06-03 21:11:22,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:11:42] 2025-06-03 21:11:22,470 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:11:42] 2025-06-03 21:11:22,473 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:11:42] 2025-06-03 21:11:22,474 | INFO     | sum of square deviations: 226022842.5
[2025-06-03 17:11:42] 2025-06-03 21:11:22,474 | INFO     | sum of deviations: 324213017.5000001
[2025-06-03 17:11:42] 2025-06-03 21:11:22,474 | INFO     | mean x: 1748982222.5
[2025-06-03 17:11:42] 2025-06-03 21:11:22,475 | INFO     | mean y: 2491526.1
[2025-06-03 17:11:42] 2025-06-03 21:11:22,475 | INFO     | -- intersect: -2506293858.7691493
[2025-06-03 17:11:42] 2025-06-03 21:11:22,475 | INFO     | intersect: -2506293858.7691493
[2025-06-03 17:11:42] 2025-06-03 21:11:22,475 | INFO     | chi2: 0.018666726111635012
[2025-06-03 17:11:42] 2025-06-03 21:11:22,475 | INFO     | -- intersect: -2506293858.7691493
[2025-06-03 17:11:42] 2025-06-03 21:11:22,476 | INFO     | current memory leak: 1.43 B/s (using 90 data points, chi2=0.02)
[2025-06-03 17:11:42] 2025-06-03 21:11:22,476 | INFO     | ..............................
[2025-06-03 17:11:42] 2025-06-03 21:11:22,476 | INFO     | . Timing measurements:
[2025-06-03 17:11:42] 2025-06-03 21:11:22,476 | INFO     | . get job = 0 s
[2025-06-03 17:11:42] 2025-06-03 21:11:22,477 | INFO     | . initial setup = 2 s
[2025-06-03 17:11:42] 2025-06-03 21:11:22,477 | INFO     | . payload setup = 11 s
[2025-06-03 17:11:42] 2025-06-03 21:11:22,477 | INFO     | . stage-in = 0 s
[2025-06-03 17:11:42] 2025-06-03 21:11:22,477 | INFO     | . payload execution = 5871 s
[2025-06-03 17:11:42] 2025-06-03 21:11:22,477 | INFO     | . stage-out = 0 s
[2025-06-03 17:11:42] 2025-06-03 21:11:22,477 | INFO     | . log creation = 0 s
[2025-06-03 17:11:42] 2025-06-03 21:11:22,478 | INFO     | ..............................
[2025-06-03 17:11:42] 2025-06-03 21:11:23,049 | INFO     | 
[2025-06-03 17:11:42] 2025-06-03 21:11:23,049 | INFO     | job summary report
[2025-06-03 17:11:42] 2025-06-03 21:11:23,049 | INFO     | --------------------------------------------------
[2025-06-03 17:11:42] 2025-06-03 21:11:23,049 | INFO     | PanDA job id: 6677785727
[2025-06-03 17:11:42] 2025-06-03 21:11:23,050 | INFO     | task id: 45006595
[2025-06-03 17:11:42] 2025-06-03 21:11:23,050 | INFO     | errors: (none)
[2025-06-03 17:11:42] 2025-06-03 21:11:23,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:11:42] 2025-06-03 21:11:23,050 | INFO     | pilot state: finished 
[2025-06-03 17:11:42] 2025-06-03 21:11:23,050 | INFO     | transexitcode: 0
[2025-06-03 17:11:42] 2025-06-03 21:11:23,050 | INFO     | exeerrorcode: 0
[2025-06-03 17:11:42] 2025-06-03 21:11:23,050 | INFO     | exeerrordiag: 
[2025-06-03 17:11:42] 2025-06-03 21:11:23,051 | INFO     | exitcode: 0
[2025-06-03 17:11:42] 2025-06-03 21:11:23,051 | INFO     | exitmsg: OK
[2025-06-03 17:11:42] 2025-06-03 21:11:23,051 | INFO     | cpuconsumptiontime: 43513 s
[2025-06-03 17:11:42] 2025-06-03 21:11:23,051 | INFO     | nevents: 400
[2025-06-03 17:11:42] 2025-06-03 21:11:23,051 | INFO     | neventsw: 0
[2025-06-03 17:11:42] 2025-06-03 21:11:23,051 | INFO     | pid: 14807
[2025-06-03 17:11:42] 2025-06-03 21:11:23,051 | INFO     | pgrp: 14807
[2025-06-03 17:11:42] 2025-06-03 21:11:23,051 | INFO     | corecount: 8
[2025-06-03 17:11:42] 2025-06-03 21:11:23,051 | INFO     | event service: False
[2025-06-03 17:11:42] 2025-06-03 21:11:23,052 | INFO     | sizes: {0: 2404957, 1: 2405212, 7: 2405418, 12: 2405446, 5886: 2432098, 5887: 2441039, 5889: 2441223, 5896: 2441393}
[2025-06-03 17:11:42] 2025-06-03 21:11:23,052 | INFO     | --------------------------------------------------
[2025-06-03 17:11:42] 2025-06-03 21:11:23,052 | INFO     | 
[2025-06-03 17:11:42] 2025-06-03 21:11:23,052 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 17:11:42] 2025-06-03 21:11:23,079 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,080 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,080 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,080 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:11:42] 2025-06-03 21:11:23,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:11:42] 2025-06-03 21:11:23,083 | INFO     | job 6677785727 has completed (purged errors)
[2025-06-03 17:11:42] 2025-06-03 21:11:23,083 | INFO     | overall cleanup function is called
[2025-06-03 17:11:42] 2025-06-03 21:11:24,091 | INFO     | --- collectZombieJob: --- 10, [14807]
[2025-06-03 17:11:42] 2025-06-03 21:11:24,092 | INFO     | zombie collector waiting for pid 14807
[2025-06-03 17:11:42] 2025-06-03 21:11:24,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:11:42] 2025-06-03 21:11:24,092 | INFO     | collected zombie processes
[2025-06-03 17:11:42] 2025-06-03 21:11:24,092 | INFO     | will attempt to kill all subprocesses of pid=14807
[2025-06-03 17:11:42] 2025-06-03 21:11:24,176 | INFO     | process IDs to be killed: [14807] (in reverse order)
[2025-06-03 17:11:42] 2025-06-03 21:11:24,226 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:11:42] 2025-06-03 21:11:24,226 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:11:42] 2025-06-03 21:11:24,231 | INFO     | did not find any defunct processes belonging to 14807
[2025-06-03 17:11:42] 2025-06-03 21:11:24,234 | INFO     | did not find any defunct processes belonging to 14807
[2025-06-03 17:11:42] 2025-06-03 21:11:24,234 | INFO     | ready for new job
[2025-06-03 17:11:42] 2025-06-03 21:11:24,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:11:42] 2025-06-03 21:11:24,236 | INFO     | **************************************
[2025-06-03 17:11:42] 2025-06-03 21:11:24,236 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:11:42] 2025-06-03 21:11:24,236 | INFO     | **************************************
[2025-06-03 17:11:42] 2025-06-03 21:11:24,236 | INFO     | 
[2025-06-03 17:11:42] 2025-06-03 21:11:24,236 | INFO     | architecture information:
[2025-06-03 17:11:42] 2025-06-03 21:11:24,237 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:11:42] 2025-06-03 21:11:24,255 | INFO     | cat /etc/os-release:
[2025-06-03 17:11:42] NAME="CentOS Linux"
[2025-06-03 17:11:42] VERSION="7 (Core)"
[2025-06-03 17:11:42] ID="centos"
[2025-06-03 17:11:42] ID_LIKE="rhel fedora"
[2025-06-03 17:11:42] VERSION_ID="7"
[2025-06-03 17:11:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:11:42] ANSI_COLOR="0;31"
[2025-06-03 17:11:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:11:42] HOME_URL="https://www.centos.org/"
[2025-06-03 17:11:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:11:42] 
[2025-06-03 17:11:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:11:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:11:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:11:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:11:42] 
[2025-06-03 17:11:42] 2025-06-03 21:11:24,255 | INFO     | **************************************
[2025-06-03 17:11:42] 2025-06-03 21:11:24,759 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 17:11:42] 2025-06-03 21:11:24,778 | INFO     | sufficient remaining disk space (18643681280 B)
[2025-06-03 17:11:42] 2025-06-03 21:11:24,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:11:42] 2025-06-03 21:11:24,778 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:11:42] 2025-06-03 21:11:24,779 | INFO     | update_server=False
[2025-06-03 17:11:42] 2025-06-03 21:11:24,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:11:42] 2025-06-03 21:11:24,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:11:42] 2025-06-03 21:11:24,779 | INFO     | aborting loop
[2025-06-03 17:11:42] 2025-06-03 21:11:24,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:11:42] 2025-06-03 21:11:24,824 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:11:42] 2025-06-03 21:11:24,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:11:42] 2025-06-03 21:11:24,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:11:42] 2025-06-03 21:11:25,167 | INFO     | all payload control threads have been joined
[2025-06-03 17:11:42] 2025-06-03 21:11:25,220 | INFO     | all job control threads have been joined
[2025-06-03 17:11:42] 2025-06-03 21:11:25,412 | INFO     | all data control threads have been joined
[2025-06-03 17:11:42] 2025-06-03 21:11:25,784 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:25,785 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:26,173 | INFO     | [payload] control thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:26,178 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:26,201 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:26,225 | INFO     | [job] control thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:26,417 | INFO     | [data] control thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:26,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:11:42] 2025-06-03 21:11:26,784 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:26,922 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:27,085 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:27,147 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:27,154 | INFO     | [job] validate thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:27,161 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:27,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:11:42] 2025-06-03 21:11:28,577 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:30,691 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:35,698 | INFO     | job.realtimelogging is not enabled
[2025-06-03 17:11:42] 2025-06-03 21:11:36,704 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:11:42] 2025-06-03 21:11:37,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140588653352768)>', '<ExcThread(monitor, started 140587609081600)>']
[2025-06-03 17:11:42] 2025-06-03 21:11:37,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:11:42] 2025-06-03 21:11:37,889 | INFO     | [monitor] control thread has ended
[2025-06-03 17:11:42] 2025-06-03 21:11:42,216 | INFO     | all workflow threads have been joined
[2025-06-03 17:11:42] 2025-06-03 21:11:42,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:11:42] 2025-06-03 21:11:42,217 | INFO     | traces error code: 0
[2025-06-03 17:11:42] 2025-06-03 21:11:42,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:11:42] 2025-06-03 21:11:42,311 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:11:42] 2025-06-03 21:11:42,317 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:11:42] 2025-06-03 21:11:42,321 [wrapper] pilotpid: 8354
[2025-06-03 17:11:42] 2025-06-03 21:11:42,326 [wrapper] Pilot exit status: 0
[2025-06-03 17:11:42] 2025-06-03 21:11:42,344 [wrapper] pandaids: 6677785727
[2025-06-03 17:11:42] 2025-06-03 21:11:42,386 [wrapper] cleanup supervisor_pilot  4271 8355
[2025-06-03 17:11:42] 2025-06-03 21:11:42,391 [wrapper] Test setup, not cleaning
[2025-06-03 17:11:42] 2025-06-03 21:11:42,395 [wrapper] apfmon messages muted
[2025-06-03 17:11:42] 2025-06-03 21:11:42,400 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:11:42] 2025-06-03 21:11:42,405 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:11:42]  *** Error codes and diagnostics ***
[2025-06-03 17:11:42]     "exeErrorCode": 0,
[2025-06-03 17:11:42]     "exeErrorDiag": "",
[2025-06-03 17:11:42]     "pilotErrorCode": 0,
[2025-06-03 17:11:42]     "pilotErrorDiag": "",
[2025-06-03 17:11:42]  *** Listing of results directory ***
[2025-06-03 17:11:42] total 389520
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 12:42 pilot3.tar.gz
[2025-06-03 17:11:42] -rwx------ 1 boincer umatlas     37140 Jun  3 12:55 runpilot2-wrapper.sh
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 12:55 queuedata.json
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas       100 Jun  3 15:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:11:42] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 15:32 run_atlas
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas       105 Jun  3 15:32 job.xml
[2025-06-03 17:11:42] -rw-r--r-- 2 boincer umatlas 217865012 Jun  3 15:32 EVNT.45006593._001588.pool.root.1
[2025-06-03 17:11:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 15:32 start_atlas.sh
[2025-06-03 17:11:42] drwxrwx--x 2 boincer umatlas      4096 Jun  3 15:32 shared
[2025-06-03 17:11:42] -rw-r--r-- 2 boincer umatlas    508880 Jun  3 15:32 input.tar.gz
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas         0 Jun  3 15:32 boinc_lockfile
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 15:32 pandaJob.out
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas    986893 Jun  3 15:32 agis_schedconf.cvmfs.json
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas   1603667 Jun  3 15:32 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:11:42] drwx------ 4 boincer umatlas      4096 Jun  3 15:32 pilot3
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas      5824 Jun  3 17:10 init_data.xml
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas 175453912 Jun  3 17:10 HITS.45006595._039593.pool.root.1
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas       529 Jun  3 17:10 boinc_task_state.xml
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas        95 Jun  3 17:11 pilot_heartbeat.json
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas      1050 Jun  3 17:11 memory_monitor_summary.json
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas    310878 Jun  3 17:11 log.45006595._039593.job.log.tgz.1
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas      7742 Jun  3 17:11 heartbeat.json
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas        27 Jun  3 17:11 wrapper_checkpoint.txt
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 17:11 boinc_mmap_file
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas      4425 Jun  3 17:11 pilotlog.txt
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas    549455 Jun  3 17:11 log.45006595._039593.job.log.1
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas       357 Jun  3 17:11 output.list
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas       620 Jun  3 17:11 runtime_log
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas    880640 Jun  3 17:11 result.tar.gz
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas      8654 Jun  3 17:11 runtime_log.err
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas       657 Jun  3 17:11 nGDLDmJ6jg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBMZKDmGeEbpn.diag
[2025-06-03 17:11:42] -rw-r--r-- 1 boincer umatlas     21408 Jun  3 17:11 stderr.txt
[2025-06-03 17:11:42] HITS file was successfully produced:
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas 175453912 Jun  3 17:10 shared/HITS.pool.root.1
[2025-06-03 17:11:42]  *** Contents of shared directory: ***
[2025-06-03 17:11:42] total 385480
[2025-06-03 17:11:42] -rw-r--r-- 2 boincer umatlas 217865012 Jun  3 15:32 ATLAS.root_0
[2025-06-03 17:11:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 15:32 start_atlas.sh
[2025-06-03 17:11:42] -rw-r--r-- 2 boincer umatlas    508880 Jun  3 15:32 input.tar.gz
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas 175453912 Jun  3 17:10 HITS.pool.root.1
[2025-06-03 17:11:42] -rw------- 1 boincer umatlas    880640 Jun  3 17:11 result.tar.gz
17:11:44 (4695): run_atlas exited; CPU time 43474.321381
17:11:44 (4695): called boinc_finish(0)

</stderr_txt>
]]>

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