Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:02:09 (25529): wrapper (7.7.26015): starting
10:02:09 (25529): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:02:09] Arguments: --nthreads 8
[2025-06-04 10:02:09] Threads: 8
[2025-06-04 10:02:09] Checking for CVMFS
[2025-06-04 10:02:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:02:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:02:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:02:13] 2.11.2.0 16701 33054 99900 146772 1 69 16835740 25165824 3906 130560 0 19027447 99.832 19321367 2529 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:02:13] CVMFS is ok
[2025-06-04 10:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:02:13] Checking for apptainer binary...
[2025-06-04 10:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:02:13] Running /usr/bin/apptainer --version
[2025-06-04 10:02:13] apptainer version 1.3.2-1.el7
[2025-06-04 10:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:11:48] cg-vwn475.simple-grid.lan
[2025-06-04 10:11:48] apptainer works
[2025-06-04 10:11:48] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:11:48] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:11:48] Starting ATLAS job with PandaID=6677675339
[2025-06-04 10:11:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:59:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:59:06] 2025-06-04 11:58:50,647 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6677675339/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:59:06] 2025-06-04 11:58:50,648 | INFO     | extracted standard info from prmon json
[2025-06-04 13:59:06] 2025-06-04 11:58:50,648 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:59:06] 2025-06-04 11:58:50,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:59:06] 2025-06-04 11:58:50,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:59:06] 2025-06-04 11:58:50,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:59:06] 2025-06-04 11:58:50,653 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:59:06] 2025-06-04 11:58:50,654 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,655 | INFO     | sum of deviations: 46196420844.50002
[2025-06-04 13:59:06] 2025-06-04 11:58:50,656 | INFO     | mean x: 1749031824.5
[2025-06-04 13:59:06] 2025-06-04 11:58:50,656 | INFO     | mean y: 2477451.3254716983
[2025-06-04 13:59:06] 2025-06-04 11:58:50,656 | INFO     | -- intersect: -27345782365.870132
[2025-06-04 13:59:06] 2025-06-04 11:58:50,656 | INFO     | intersect: -27345782365.870132
[2025-06-04 13:59:06] 2025-06-04 11:58:50,657 | INFO     | chi2: 5.6886537274665185
[2025-06-04 13:59:06] 2025-06-04 11:58:50,657 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,658 | INFO     | sum of deviations: 45460196502.99999
[2025-06-04 13:59:06] 2025-06-04 11:58:50,659 | INFO     | mean x: 1749031672.0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,659 | INFO     | mean y: 2476901.2850241545
[2025-06-04 13:59:06] 2025-06-04 11:58:50,659 | INFO     | -- intersect: -28907627350.43365
[2025-06-04 13:59:06] 2025-06-04 11:58:50,659 | INFO     | intersect: -28907627350.43365
[2025-06-04 13:59:06] 2025-06-04 11:58:50,659 | INFO     | chi2: 5.698620977239257
[2025-06-04 13:59:06] 2025-06-04 11:58:50,660 | INFO     | current chi2=5.698620977239257 (change=-0.17521280517766882 %)
[2025-06-04 13:59:06] 2025-06-04 11:58:50,660 | INFO     | right removable region: 206
[2025-06-04 13:59:06] 2025-06-04 11:58:50,660 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,662 | INFO     | sum of deviations: -26065191481.000008
[2025-06-04 13:59:06] 2025-06-04 11:58:50,662 | INFO     | mean x: 1749031977.0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,662 | INFO     | mean y: 2531367.768115942
[2025-06-04 13:59:06] 2025-06-04 11:58:50,662 | INFO     | -- intersect: 16578516348.65683
[2025-06-04 13:59:06] 2025-06-04 11:58:50,662 | INFO     | intersect: 16578516348.65683
[2025-06-04 13:59:06] 2025-06-04 11:58:50,663 | INFO     | chi2: 1.054056728778792
[2025-06-04 13:59:06] 2025-06-04 11:58:50,663 | INFO     | current chi2=1.054056728778792 (change=81.47089312732305 %)
[2025-06-04 13:59:06] 2025-06-04 11:58:50,663 | INFO     | sum of square deviations: 2555770710.5
[2025-06-04 13:59:06] 2025-06-04 11:58:50,665 | INFO     | sum of deviations: -51248102965.5
[2025-06-04 13:59:06] 2025-06-04 11:58:50,665 | INFO     | mean x: 1749032129.5
[2025-06-04 13:59:06] 2025-06-04 11:58:50,665 | INFO     | mean y: 2550925.698019802
[2025-06-04 13:59:06] 2025-06-04 11:58:50,665 | INFO     | -- intersect: 35073998569.390594
[2025-06-04 13:59:06] 2025-06-04 11:58:50,665 | INFO     | intersect: 35073998569.390594
[2025-06-04 13:59:06] 2025-06-04 11:58:50,666 | INFO     | chi2: 0.210317439387687
[2025-06-04 13:59:06] 2025-06-04 11:58:50,666 | INFO     | current chi2=0.210317439387687 (change=80.04685766473344 %)
[2025-06-04 13:59:06] 2025-06-04 11:58:50,666 | INFO     | sum of square deviations: 2370641658.0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,667 | INFO     | sum of deviations: -48900277412.0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,668 | INFO     | mean x: 1749032282.0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,668 | INFO     | mean y: 2548953.959390863
[2025-06-04 13:59:06] 2025-06-04 11:58:50,668 | INFO     | -- intersect: 36080613938.48325
[2025-06-04 13:59:06] 2025-06-04 11:58:50,668 | INFO     | intersect: 36080613938.48325
[2025-06-04 13:59:06] 2025-06-04 11:58:50,668 | INFO     | chi2: 0.19901372452989402
[2025-06-04 13:59:06] 2025-06-04 11:58:50,669 | INFO     | current chi2=0.19901372452989402 (change=5.37459703327614 %)
[2025-06-04 13:59:06] 2025-06-04 11:58:50,669 | INFO     | left removable region: 30
[2025-06-04 13:59:06] 2025-06-04 11:58:50,669 | INFO     | sum of square deviations: 1690450300.0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,670 | INFO     | sum of deviations: -29853298831.499996
[2025-06-04 13:59:06] 2025-06-04 11:58:50,670 | INFO     | mean x: 1749032556.5
[2025-06-04 13:59:06] 2025-06-04 11:58:50,671 | INFO     | mean y: 2533587.789772727
[2025-06-04 13:59:06] 2025-06-04 11:58:50,671 | INFO     | -- intersect: 30890393216.207653
[2025-06-04 13:59:06] 2025-06-04 11:58:50,671 | INFO     | intersect: 30890393216.207653
[2025-06-04 13:59:06] 2025-06-04 11:58:50,671 | INFO     | chi2: 0.17462143061306407
[2025-06-04 13:59:06] 2025-06-04 11:58:50,671 | INFO     | -- intersect: 30890393216.207653
[2025-06-04 13:59:06] 2025-06-04 11:58:50,671 | INFO     | current memory leak: -17.66 B/s (using 176 data points, chi2=0.17)
[2025-06-04 13:59:06] 2025-06-04 11:58:50,672 | INFO     | ..............................
[2025-06-04 13:59:06] 2025-06-04 11:58:50,672 | INFO     | . Timing measurements:
[2025-06-04 13:59:06] 2025-06-04 11:58:50,672 | INFO     | . get job = 0 s
[2025-06-04 13:59:06] 2025-06-04 11:58:50,672 | INFO     | . initial setup = 3 s
[2025-06-04 13:59:06] 2025-06-04 11:58:50,673 | INFO     | . payload setup = 163 s
[2025-06-04 13:59:06] 2025-06-04 11:58:50,673 | INFO     | . stage-in = 0 s
[2025-06-04 13:59:06] 2025-06-04 11:58:50,673 | INFO     | . payload execution = 13055 s
[2025-06-04 13:59:06] 2025-06-04 11:58:50,673 | INFO     | . stage-out = 3 s
[2025-06-04 13:59:06] 2025-06-04 11:58:50,673 | INFO     | . log creation = 1 s
[2025-06-04 13:59:06] 2025-06-04 11:58:50,673 | INFO     | ..............................
[2025-06-04 13:59:06] 2025-06-04 11:58:50,797 | INFO     | 
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | job summary report
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | --------------------------------------------------
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | PanDA job id: 6677675339
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | task id: 45006595
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | errors: (none)
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | pilot state: finished 
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | transexitcode: 0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | exeerrorcode: 0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | exeerrordiag: 
[2025-06-04 13:59:06] 2025-06-04 11:58:50,798 | INFO     | exitcode: 0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | exitmsg: OK
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | cpuconsumptiontime: 46802 s
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | nevents: 400
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | neventsw: 0
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | pid: 15774
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | pgrp: 15774
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | corecount: 8
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | event service: False
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | sizes: {0: 2405014, 1: 2405213, 12: 2405213, 22: 2405241, 33: 2405269, 44: 2405325, 55: 2405481, 65: 2405509, 76: 2405537, 87: 2405593, 90: 2405827, 97: 2406135, 1
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | --------------------------------------------------
[2025-06-04 13:59:06] 2025-06-04 11:58:50,799 | INFO     | 
[2025-06-04 13:59:06] 2025-06-04 11:58:50,800 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-04 13:59:06] 2025-06-04 11:58:50,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,834 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,835 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:59:06] 2025-06-04 11:58:50,836 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,836 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:59:06] 2025-06-04 11:58:50,836 | INFO     | job 6677675339 has completed (purged errors)
[2025-06-04 13:59:06] 2025-06-04 11:58:50,836 | INFO     | overall cleanup function is called
[2025-06-04 13:59:06] 2025-06-04 11:58:51,845 | INFO     | --- collectZombieJob: --- 10, [15774]
[2025-06-04 13:59:06] 2025-06-04 11:58:51,846 | INFO     | zombie collector waiting for pid 15774
[2025-06-04 13:59:06] 2025-06-04 11:58:51,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:59:06] 2025-06-04 11:58:51,846 | INFO     | collected zombie processes
[2025-06-04 13:59:06] 2025-06-04 11:58:51,846 | INFO     | will attempt to kill all subprocesses of pid=15774
[2025-06-04 13:59:06] 2025-06-04 11:58:51,937 | INFO     | process IDs to be killed: [15774] (in reverse order)
[2025-06-04 13:59:06] 2025-06-04 11:58:52,002 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:59:06] 2025-06-04 11:58:52,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:59:06] 2025-06-04 11:58:52,006 | INFO     | did not find any defunct processes belonging to 15774
[2025-06-04 13:59:06] 2025-06-04 11:58:52,009 | INFO     | did not find any defunct processes belonging to 15774
[2025-06-04 13:59:06] 2025-06-04 11:58:52,010 | INFO     | ready for new job
[2025-06-04 13:59:06] 2025-06-04 11:58:52,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:59:06] 2025-06-04 11:58:52,012 | INFO     | **************************************
[2025-06-04 13:59:06] 2025-06-04 11:58:52,012 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:59:06] 2025-06-04 11:58:52,012 | INFO     | **************************************
[2025-06-04 13:59:06] 2025-06-04 11:58:52,012 | INFO     | 
[2025-06-04 13:59:06] 2025-06-04 11:58:52,013 | INFO     | pilot is running in a VM
[2025-06-04 13:59:06] 2025-06-04 11:58:52,013 | INFO     | architecture information:
[2025-06-04 13:59:06] 2025-06-04 11:58:52,013 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:59:06] 2025-06-04 11:58:52,051 | INFO     | cat /etc/os-release:
[2025-06-04 13:59:06] NAME="CentOS Linux"
[2025-06-04 13:59:06] VERSION="7 (Core)"
[2025-06-04 13:59:06] ID="centos"
[2025-06-04 13:59:06] ID_LIKE="rhel fedora"
[2025-06-04 13:59:06] VERSION_ID="7"
[2025-06-04 13:59:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:59:06] ANSI_COLOR="0;31"
[2025-06-04 13:59:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:59:06] HOME_URL="https://www.centos.org/"
[2025-06-04 13:59:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:59:06] 
[2025-06-04 13:59:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:59:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:59:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:59:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:59:06] 
[2025-06-04 13:59:06] 2025-06-04 11:58:52,051 | INFO     | **************************************
[2025-06-04 13:59:06] 2025-06-04 11:58:52,555 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-04 13:59:06] 2025-06-04 11:58:52,575 | INFO     | sufficient remaining disk space (496726179840 B)
[2025-06-04 13:59:06] 2025-06-04 11:58:52,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:59:06] 2025-06-04 11:58:52,576 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:59:06] 2025-06-04 11:58:52,576 | INFO     | update_server=False
[2025-06-04 13:59:06] 2025-06-04 11:58:52,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:59:06] 2025-06-04 11:58:52,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:59:06] 2025-06-04 11:58:52,577 | INFO     | aborting loop
[2025-06-04 13:59:06] 2025-06-04 11:58:52,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:59:06] 2025-06-04 11:58:53,282 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:59:06] 2025-06-04 11:58:53,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:59:06] 2025-06-04 11:58:53,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:59:06] 2025-06-04 11:58:53,357 | INFO     | all data control threads have been joined
[2025-06-04 13:59:06] 2025-06-04 11:58:53,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:59:06] 2025-06-04 11:58:53,581 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:53,583 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:53,585 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:53,591 | INFO     | [job] validate thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:53,655 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:53,732 | INFO     | all job control threads have been joined
[2025-06-04 13:59:06] 2025-06-04 11:58:53,810 | INFO     | all payload control threads have been joined
[2025-06-04 13:59:06] 2025-06-04 11:58:53,834 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:53,836 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:53,900 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:54,124 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:54,148 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:54,363 | INFO     | [data] control thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:54,738 | INFO     | [job] control thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:54,816 | INFO     | [payload] control thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:55,074 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:55,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:59:06] 2025-06-04 11:58:55,589 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:58:59,543 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:59:06] 2025-06-04 11:59:01,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140167856858944)>', '<ExcThread(monitor, started 140167197226752)>']
[2025-06-04 13:59:06] 2025-06-04 11:59:01,328 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:59:06] 2025-06-04 11:59:01,329 | INFO     | [monitor] control thread has ended
[2025-06-04 13:59:06] 2025-06-04 11:59:06,159 | INFO     | all workflow threads have been joined
[2025-06-04 13:59:06] 2025-06-04 11:59:06,160 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:59:06] 2025-06-04 11:59:06,160 | INFO     | traces error code: 0
[2025-06-04 13:59:06] 2025-06-04 11:59:06,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:59:06] 2025-06-04 11:59:06,369 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:59:06] 2025-06-04 11:59:06,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:59:06] 2025-06-04 11:59:06,406 [wrapper] pilotpid: 9131
[2025-06-04 13:59:06] 2025-06-04 11:59:06,409 [wrapper] Pilot exit status: 0
[2025-06-04 13:59:06] 2025-06-04 11:59:06,429 [wrapper] pandaids: 6677675339
[2025-06-04 13:59:06] 2025-06-04 11:59:06,469 [wrapper] cleanup supervisor_pilot 25041 9132
[2025-06-04 13:59:06] 2025-06-04 11:59:06,486 [wrapper] Test setup, not cleaning
[2025-06-04 13:59:06] 2025-06-04 11:59:06,491 [wrapper] apfmon messages muted
[2025-06-04 13:59:06] 2025-06-04 11:59:06,499 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:59:06] 2025-06-04 11:59:06,505 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:59:06]  *** Error codes and diagnostics ***
[2025-06-04 13:59:06]     "exeErrorCode": 0,
[2025-06-04 13:59:06]     "exeErrorDiag": "",
[2025-06-04 13:59:06]     "pilotErrorCode": 0,
[2025-06-04 13:59:06]     "pilotErrorDiag": "",
[2025-06-04 13:59:06]  *** Listing of results directory ***
[2025-06-04 13:59:06] total 394960
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:31 pilot3.tar.gz
[2025-06-04 13:59:06] -rwx------. 1 boinc boinc     37140 Jun  3 16:33 runpilot2-wrapper.sh
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc      5111 Jun  3 16:33 queuedata.json
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:59:06] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:02 run_atlas
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:02 job.xml
[2025-06-04 13:59:06] -rw-r--r--. 2 boinc boinc 214718652 Jun  4 10:02 EVNT.45006593._001434.pool.root.1
[2025-06-04 13:59:06] -rw-r--r--. 2 boinc boinc    508873 Jun  4 10:02 input.tar.gz
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc      6393 Jun  4 10:02 init_data.xml
[2025-06-04 13:59:06] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:02 start_atlas.sh
[2025-06-04 13:59:06] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:02 shared
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:02 boinc_lockfile
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc      2525 Jun  4 10:11 pandaJob.out
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc    986745 Jun  4 10:14 agis_schedconf.cvmfs.json
[2025-06-04 13:59:06] drwx------. 4 boinc boinc      4096 Jun  4 10:14 pilot3
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc 182831459 Jun  4 13:57 HITS.45006595._035696.pool.root.1
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc       531 Jun  4 13:57 boinc_task_state.xml
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc        95 Jun  4 13:58 pilot_heartbeat.json
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc      1015 Jun  4 13:58 memory_monitor_summary.json
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc   1598969 Jun  4 13:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc    386972 Jun  4 13:58 log.45006595._035696.job.log.tgz.1
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc      7696 Jun  4 13:58 heartbeat.json
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc        28 Jun  4 13:58 wrapper_checkpoint.txt
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc      8192 Jun  4 13:58 boinc_mmap_file
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc      4417 Jun  4 13:59 pilotlog.txt
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc   1150404 Jun  4 13:59 log.45006595._035696.job.log.1
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc       357 Jun  4 13:59 output.list
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc       620 Jun  4 13:59 runtime_log
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc   1556480 Jun  4 13:59 result.tar.gz
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc      8673 Jun  4 13:59 runtime_log.err
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc       657 Jun  4 13:59 hiILDmBthg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDakKDmsP4ocm.diag
[2025-06-04 13:59:06] -rw-r--r--. 1 boinc boinc     20533 Jun  4 13:59 stderr.txt
[2025-06-04 13:59:06] HITS file was successfully produced:
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc 182831459 Jun  4 13:57 shared/HITS.pool.root.1
[2025-06-04 13:59:06]  *** Contents of shared directory: ***
[2025-06-04 13:59:06] total 390272
[2025-06-04 13:59:06] -rw-r--r--. 2 boinc boinc 214718652 Jun  4 10:02 ATLAS.root_0
[2025-06-04 13:59:06] -rw-r--r--. 2 boinc boinc    508873 Jun  4 10:02 input.tar.gz
[2025-06-04 13:59:06] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:02 start_atlas.sh
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc 182831459 Jun  4 13:57 HITS.pool.root.1
[2025-06-04 13:59:06] -rw-------. 1 boinc boinc   1556480 Jun  4 13:59 result.tar.gz
13:59:08 (25529): run_atlas exited; CPU time 46965.804192
13:59:08 (25529): called boinc_finish(0)

</stderr_txt>
]]>

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