Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-03 23:15:37 (15200): Detected: vboxwrapper 26206
2025-06-03 23:15:37 (15200): Detected: BOINC client v8.0.2
2025-06-03 23:15:38 (15200): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-06-03 23:15:38 (15200): Successfully copied 'init_data.xml' to the shared directory.
2025-06-03 23:15:38 (15200): Create VM. (boinc_612e6d80661a4c71, slot#0)
2025-06-03 23:15:39 (15200): Setting Memory Size for VM. (4800MB)
2025-06-03 23:15:39 (15200): Setting CPU Count for VM. (8)
2025-06-03 23:15:40 (15200): Setting Chipset Options for VM.
2025-06-03 23:15:40 (15200): Setting Graphics Controller Options for VM.
2025-06-03 23:15:40 (15200): Setting Boot Options for VM.
2025-06-03 23:15:40 (15200): Setting Network Configuration for NAT.
2025-06-03 23:15:41 (15200): Enabling VM Network Access.
2025-06-03 23:15:41 (15200): Disabling USB Support for VM.
2025-06-03 23:15:41 (15200): Disabling COM Port Support for VM.
2025-06-03 23:15:41 (15200): Disabling LPT Port Support for VM.
2025-06-03 23:15:42 (15200): Disabling Audio Support for VM.
2025-06-03 23:15:42 (15200): Disabling Clipboard Support for VM.
2025-06-03 23:15:42 (15200): Disabling Drag and Drop Support for VM.
2025-06-03 23:15:42 (15200): Adding storage controller(s) to VM.
2025-06-03 23:15:43 (15200): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-03 23:15:46 (15200): Adding VirtualBox Guest Additions to VM.
2025-06-03 23:15:46 (15200): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-03 23:15:46 (15200): forwarding host port 49526 to guest port 80
2025-06-03 23:15:46 (15200): Enabling remote desktop for VM.
2025-06-03 23:15:47 (15200): Required extension pack not installed, remote desktop not enabled.
2025-06-03 23:15:47 (15200): Enabling shared directory for VM.
2025-06-03 23:15:47 (15200): Starting VM using VBoxManage interface. (boinc_612e6d80661a4c71, slot#0)
2025-06-03 23:15:53 (15200): Successfully started VM. (PID = '24104')
2025-06-03 23:15:53 (15200): Reporting VM Process ID to BOINC.
2025-06-03 23:15:53 (15200): Guest Log: BIOS: VirtualBox 7.0.6
2025-06-03 23:15:53 (15200): Guest Log: CPUID EDX: 0x178bfbff
2025-06-03 23:15:53 (15200): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-03 23:15:53 (15200): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-03 23:15:53 (15200): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-03 23:15:53 (15200): Detected: Web Application Enabled (http://localhost:49526)
2025-06-03 23:15:53 (15200): Preference change detected
2025-06-03 23:15:53 (15200): Setting CPU throttle for VM. (100%)
2025-06-03 23:15:54 (15200): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-03 23:15:55 (15200): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-03 23:15:55 (15200): Guest Log: BIOS: Booting from Hard Disk...
2025-06-03 23:15:57 (15200): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-03 23:15:57 (15200): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-03 23:15:57 (15200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-03 23:16:04 (15200): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-03 23:16:04 (15200): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-03 23:16:10 (15200): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-03 23:16:10 (15200): Guest Log: 00:00:00.000141 main     Log opened 2025-06-03T23:16:07.773019000Z
2025-06-03 23:16:10 (15200): Guest Log: 00:00:00.000227 main     OS Product: Linux
2025-06-03 23:16:10 (15200): Guest Log: 00:00:00.000301 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-03 23:16:10 (15200): Guest Log: 00:00:00.000330 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-03 23:16:10 (15200): Guest Log: 00:00:00.000369 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-03 23:16:10 (15200): Guest Log: 00:00:00.000371 main     Process ID: 1369
2025-06-03 23:16:10 (15200): Guest Log: 00:00:00.000371 main     Package type: LINUX_64BITS_GENERIC
2025-06-03 23:16:10 (15200): Guest Log: 00:00:00.000987 main     5.2.32 r132073 started. Verbose level = 0
2025-06-03 23:16:10 (15200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-03 23:16:10 (15200): Guest Log: [INFO] Mounting shared directory
2025-06-03 23:16:10 (15200): Guest Log: [INFO] Checking for init_data.xml
2025-06-03 23:16:20 (15200): Guest Log: 00:00:10.002636 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 873 242 000ns (GuestNow=1 748 988 979 901 619 000 ns GuestLast=1 748 992 567 774 861 000 ns fSetTimeLastLoop=true )
2025-06-03 23:16:35 (15200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-03 23:16:35 (15200): Guest Log: [INFO] Detected branch: prod
2025-06-03 23:16:38 (15200): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-03 23:16:38 (15200): Guest Log: Copying input files
2025-06-03 23:16:39 (15200): Guest Log: Copied input files into RunAtlas.
2025-06-03 23:16:39 (15200): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-03 23:16:39 (15200): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-03 23:16:39 (15200): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-03 23:16:39 (15200): Guest Log: Further information can be found at the LHC@home message board.
2025-06-03 23:17:15 (15200): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-03 23:17:18 (15200): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-03 23:17:18 (15200): Guest Log: 2.6.3.0 1651 0 32352 146760 4 1 3120513 4096000 0 65024 0 0 n/a 1290 87 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-03 23:17:18 (15200): Guest Log: copied the webapp to /var/www
2025-06-03 23:17:18 (15200): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-03 23:17:18 (15200): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-03 23:17:20 (15200): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-03 23:17:20 (15200): Guest Log:  *** Starting ATLAS job. (PandaID=6677784127 taskID=45006595) ***
2025-06-03 23:22:28 (15200): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 00:23:13 (15200): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 00:23:15 (15200): Guest Log: 00:06:20.215279 timesync vgsvcTimeSyncWorker: Radical host time change: 3 654 827 000 000ns (HostNow=1 748 992 994 931 000 000 ns HostLast=1 748 989 340 104 000 000 ns)
2025-06-04 00:23:25 (15200): Guest Log: 00:06:30.216179 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 654 818 442 000ns (GuestNow=1 748 993 004 932 131 000 ns GuestLast=1 748 989 350 113 689 000 ns fSetTimeLastLoop=true )
2025-06-04 01:30:45 (15200): Guest Log:  *** Job finished ***
2025-06-04 01:30:45 (15200): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:32,827 | INFO     | [data] queue_monitor thread has finished
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:38,241 | INFO     | job.realtimelogging is not enabled
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:39,345 | INFO     | [payload] run_realtimelog thread has finished
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:39,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395829589824)>', '<ExcThread(monitor, started 140395098928896)>']
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:39,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:39,894 | INFO     | [monitor] control thread has ended
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:44,801 | INFO     | all workflow threads have been joined
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:44,801 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:44,802 | INFO     | traces error code: 0
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:44,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:44,885 [wrapper] ==== pilot stdout END ====
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:44,890 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:44,894 [wrapper] pilotpid: 6010
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:44,899 [wrapper] Pilot exit status: 0
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:45,281 [wrapper] pandaids: 6677784127
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:45,307 [wrapper] cleanup supervisor_pilot 24438 6011
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:45,313 [wrapper] Test setup, not cleaning
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:45,317 [wrapper] apfmon messages muted
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:45,322 [wrapper] ==== wrapper stdout END ====
2025-06-04 01:30:45 (15200): Guest Log: 2025-06-04 00:30:45,326 [wrapper] ==== wrapper stderr END ====
2025-06-04 01:30:45 (15200): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 01:30:45 (15200): Guest Log:     "exeErrorCode": 0,
2025-06-04 01:30:45 (15200): Guest Log:     "exeErrorDiag": "",
2025-06-04 01:30:45 (15200): Guest Log:     "pilotErrorCode": 0,
2025-06-04 01:30:45 (15200): Guest Log:     "pilotErrorDiag": "",
2025-06-04 01:30:45 (15200): Guest Log:  *** Listing of results directory ***
2025-06-04 01:30:45 (15200): Guest Log: total 179568
2025-06-04 01:30:45 (15200): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 16:42 pilot3.tar.gz
2025-06-04 01:30:45 (15200): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 16:51 runpilot2-wrapper.sh
2025-06-04 01:30:45 (15200): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 16:51 queuedata.json
2025-06-04 01:30:45 (15200): Guest Log: -rwxr-xr-x. 1 atlas atlas      9131 Jun  3 22:16 init_data.xml
2025-06-04 01:30:45 (15200): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 Jun  3 22:16 input.tar.gz
2025-06-04 01:30:45 (15200): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  3 22:16 start_atlas.sh
2025-06-04 01:30:45 (15200): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 22:16 EVNT.45006593._001573.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 01:30:45 (15200): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  3 22:17 pandaJob.out
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas    986861 Jun  3 22:19 agis_schedconf.cvmfs.json
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 22:19 agis_ddmendpoints.agis.ALL.json
2025-06-04 01:30:45 (15200): Guest Log: drwx------. 4 atlas atlas      4096 Jun  3 22:19 pilot3
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas        97 Jun  4 00:29 pilot_heartbeat.json
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas 178739558 Jun  4 00:29 HITS.45006595._039220.pool.root.1
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas      1033 Jun  4 00:30 memory_monitor_summary.json
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas    294492 Jun  4 00:30 log.45006595._039220.job.log.tgz.1
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas      7728 Jun  4 00:30 heartbeat.json
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas      4485 Jun  4 00:30 pilotlog.txt
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas    389713 Jun  4 00:30 log.45006595._039220.job.log.1
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 00:30 output.list
2025-06-04 01:30:45 (15200): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 00:30 runtime_log
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas    706560 Jun  4 00:30 result.tar.gz
2025-06-04 01:30:45 (15200): Guest Log: -rw-r--r--. 1 atlas atlas      8583 Jun  4 00:30 runtime_log.err
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas       649 Jun  4 00:30 dGfKDmU2jg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmWKZKDmPe6Lsn.diag
2025-06-04 01:30:45 (15200): Guest Log: Looking for outputfile HITS.45006595._039220.pool.root.1
2025-06-04 01:30:45 (15200): Guest Log: HITS file was successfully produced
2025-06-04 01:30:45 (15200): Guest Log: -rw-------. 1 atlas atlas 178739558 Jun  4 00:29 /home/atlas/RunAtlas/HITS.45006595._039220.pool.root.1
2025-06-04 01:30:46 (15200): Guest Log: Successfully finished the ATLAS job!
2025-06-04 01:30:46 (15200): Guest Log: Copying the results back to the shared directory!
2025-06-04 01:30:46 (15200): Guest Log:  *** Contents of shared directory: ***
2025-06-04 01:30:46 (15200): Guest Log: total 385080
2025-06-04 01:30:46 (15200): Guest Log: -rwxrwxrwx. 1 root root 214331211 Jun  3 22:15 ATLAS.root_0
2025-06-04 01:30:46 (15200): Guest Log: -rwxrwxrwx. 1 root root 178739558 Jun  4 00:30 HITS.pool.root.1
2025-06-04 01:30:46 (15200): Guest Log: -rwxrwxrwx. 1 root root      9131 Jun  3 22:15 init_data.xml
2025-06-04 01:30:46 (15200): Guest Log: -rwxrwxrwx. 1 root root    508877 Jun  3 19:29 input.tar.gz
2025-06-04 01:30:46 (15200): Guest Log: -rwxrwxrwx. 1 root root    706560 Jun  4 00:30 result.tar.gz
2025-06-04 01:30:46 (15200): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  3 19:29 start_atlas.sh
2025-06-04 01:30:46 (15200): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 01:30:46 (15200): VM Completion File Detected.
2025-06-04 01:30:46 (15200): Powering off VM.
2025-06-04 01:30:47 (15200): Successfully stopped VM.
2025-06-04 01:30:47 (15200): Deregistering VM. (boinc_612e6d80661a4c71, slot#0)
2025-06-04 01:30:47 (15200): Removing network bandwidth throttle group from VM.
2025-06-04 01:30:47 (15200): Removing VM from VirtualBox.
01:30:52 (15200): called boinc_finish(0)

</stderr_txt>
]]>

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