Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:16:38 (1883275): wrapper (7.7.26015): starting
06:16:38 (1883275): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 06:16:38] Arguments: --nthreads 3
[2025-06-04 06:16:38] Threads: 3
[2025-06-04 06:16:38] Checking for CVMFS
[2025-06-04 06:16:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:16:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:16:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:16:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:16:38] 2.9.2.0 1307714 1953 67124 146767 2 56 28870562 36864000 0 130560 0 1543638 99.992 516479 32171 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 06:16:38] CVMFS is ok
[2025-06-04 06:16:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:16:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:16:38] Further information can be found at the LHC@home message board.
[2025-06-04 06:16:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:16:38] Checking for apptainer binary...
[2025-06-04 06:16:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:16:38] Running /usr/bin/apptainer --version
[2025-06-04 06:16:38] apptainer version 1.3.6-6.1
[2025-06-04 06:16:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:16:38] thA325a
[2025-06-04 06:16:38] apptainer works
[2025-06-04 06:16:38] Set ATHENA_PROC_NUMBER=3
[2025-06-04 06:16:38] Set ATHENA_CORE_NUMBER=3
[2025-06-04 06:16:38] Starting ATLAS job with PandaID=6677784116
[2025-06-04 06:16:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:42:51]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:42:51]  status=None
[2025-06-04 07:42:51]  status_code=0
[2025-06-04 07:42:51]  storage_token=
[2025-06-04 07:42:51]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677784116/log.45006595._039209.job.log.tgz.1
[2025-06-04 07:42:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/7a/log.45006595._039209.job.log.tgz.1
[2025-06-04 07:42:51]  workdir=None
[2025-06-04 07:42:51] ]
[2025-06-04 07:42:51] 2025-06-04 05:42:06,880 | INFO     | transferring file log.45006595._039209.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677784116/log.45006595._039209.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 07:42:51] 2025-06-04 05:42:06,880 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677784116/log.45006595._039209.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0392
[2025-06-04 07:42:51] 2025-06-04 05:42:06,893 | INFO     | adding to output.list: log.45006595._039209.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/7a/log.45006595._039209.job.log.tg
[2025-06-04 07:42:51] 2025-06-04 05:42:06,893 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 07:42:51] 2025-06-04 05:42:06,893 | INFO     | summary of transferred files:
[2025-06-04 07:42:51] 2025-06-04 05:42:06,893 | INFO     |  -- lfn=log.45006595._039209.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 07:42:51] 2025-06-04 05:42:06,893 | INFO     | stage-out finished correctly
[2025-06-04 07:42:51] 2025-06-04 05:42:09,659 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 07:42:51] 2025-06-04 05:42:09,691 | INFO     | job 6677784116 has state=finished
[2025-06-04 07:42:51] 2025-06-04 05:42:09,691 | INFO     | preparing for final server update for job 6677784116 in state='finished'
[2025-06-04 07:42:51] 2025-06-04 05:42:09,692 | INFO     | this job has now completed (state=finished)
[2025-06-04 07:42:51] 2025-06-04 05:42:09,692 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 07:42:51] 2025-06-04 05:42:09,692 | INFO     | log transfer has been attempted: DONE
[2025-06-04 07:42:51] 2025-06-04 05:42:09,692 | INFO     | job 6677784116 has finished - writing final server update
[2025-06-04 07:42:51] 2025-06-04 05:42:09,692 | INFO     | total number of processed events: 400 (read)
[2025-06-04 07:42:51] 2025-06-04 05:42:09,693 | INFO     | executing command: lscpu
[2025-06-04 07:42:51] 2025-06-04 05:42:09,707 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 07:42:51] 2025-06-04 05:42:10,616 | WARNING  | process 1893417 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 07:42:51] 2025-06-04 05:42:10,616 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677784116/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:42:51] 2025-06-04 05:42:10,617 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677784116/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:42:51] 2025-06-04 05:42:10,617 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2652356 B
[2025-06-04 07:42:51] 2025-06-04 05:42:10,617 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15554 B
[2025-06-04 07:42:51] 2025-06-04 05:42:10,617 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 07:42:51] 2025-06-04 05:42:16,621 | INFO     | PID=1886916 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 07:42:51] 2025-06-04 05:42:17,565 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 07:42:51] 2025-06-04 05:42:17,565 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677784116/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:42:51] 2025-06-04 05:42:17,566 | INFO     | extracted standard info from prmon json
[2025-06-04 07:42:51] 2025-06-04 05:42:17,566 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:42:51] 2025-06-04 05:42:17,568 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:42:51] 2025-06-04 05:42:17,568 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:42:51] 2025-06-04 05:42:17,568 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:42:51] 2025-06-04 05:42:17,569 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:42:51] 2025-06-04 05:42:17,569 | INFO     | sum of square deviations: 141539398.0
[2025-06-04 07:42:51] 2025-06-04 05:42:17,570 | INFO     | sum of deviations: -12383940620.000002
[2025-06-04 07:42:51] 2025-06-04 05:42:17,570 | INFO     | mean x: 1749013257.0
[2025-06-04 07:42:51] 2025-06-04 05:42:17,570 | INFO     | mean y: 2446190.311688312
[2025-06-04 07:42:51] 2025-06-04 05:42:17,570 | INFO     | -- intersect: 153031755515.7675
[2025-06-04 07:42:51] 2025-06-04 05:42:17,570 | INFO     | intersect: 153031755515.7675
[2025-06-04 07:42:51] 2025-06-04 05:42:17,570 | INFO     | chi2: 0.07055539583023904
[2025-06-04 07:42:51] 2025-06-04 05:42:17,570 | INFO     | -- intersect: 153031755515.7675
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | current memory leak: -87.49 B/s (using 77 data points, chi2=0.07)
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | ..............................
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | . Timing measurements:
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | . get job = 0 s
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | . initial setup = 1 s
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | . payload setup = 6 s
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | . stage-in = 0 s
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | . payload execution = 5091 s
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | . stage-out = 0 s
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | . log creation = 0 s
[2025-06-04 07:42:51] 2025-06-04 05:42:17,571 | INFO     | ..............................
[2025-06-04 07:42:51] 2025-06-04 05:42:17,605 | INFO     | 
[2025-06-04 07:42:51] 2025-06-04 05:42:17,605 | INFO     | job summary report
[2025-06-04 07:42:51] 2025-06-04 05:42:17,605 | INFO     | --------------------------------------------------
[2025-06-04 07:42:51] 2025-06-04 05:42:17,605 | INFO     | PanDA job id: 6677784116
[2025-06-04 07:42:51] 2025-06-04 05:42:17,605 | INFO     | task id: 45006595
[2025-06-04 07:42:51] 2025-06-04 05:42:17,605 | INFO     | errors: (none)
[2025-06-04 07:42:51] 2025-06-04 05:42:17,605 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | sufficient remaining disk space (828428517376 B)
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | pilot state: finished 
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | transexitcode: 0
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | exeerrorcode: 0
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | exeerrordiag: 
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | exitcode: 0
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | exitmsg: OK
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | cpuconsumptiontime: 14633 s
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | nevents: 400
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | neventsw: 0
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | pid: 1893417
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | pgrp: 1893417
[2025-06-04 07:42:51] 2025-06-04 05:42:17,606 | INFO     | corecount: 3
[2025-06-04 07:42:51] 2025-06-04 05:42:17,607 | INFO     | event service: False
[2025-06-04 07:42:51] 2025-06-04 05:42:17,607 | INFO     | sizes: {0: 2405187, 6: 2405393, 11: 2405421, 5101: 2431701, 5102: 2440648, 5105: 2440704, 5113: 2441002}
[2025-06-04 07:42:51] 2025-06-04 05:42:17,607 | INFO     | --------------------------------------------------
[2025-06-04 07:42:51] 2025-06-04 05:42:17,607 | INFO     | 
[2025-06-04 07:42:51] 2025-06-04 05:42:17,607 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 07:42:51] 2025-06-04 05:42:17,609 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6677784116: 2951514 B (within 2537553920 B limit)
[2025-06-04 07:42:51] 2025-06-04 05:42:17,609 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6677784116/HITS.45006595._039209.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 07:42:51] 2025-06-04 05:42:17,609 | INFO     | total size of present files: 0 B (workdir size: 2951514 B)
[2025-06-04 07:42:51] 2025-06-04 05:42:17,609 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6677784116/HITS.45006595._039209.pool.root.1 since it does not exist
[2025-06-04 07:42:51] 2025-06-04 05:42:17,619 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,619 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,619 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,619 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:42:51] 2025-06-04 05:42:17,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,621 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:42:51] 2025-06-04 05:42:17,621 | INFO     | job 6677784116 has completed (purged errors)
[2025-06-04 07:42:51] 2025-06-04 05:42:17,621 | INFO     | overall cleanup function is called
[2025-06-04 07:42:51] 2025-06-04 05:42:17,654 | INFO     | number of running child processes to parent process 1893417: 1
[2025-06-04 07:42:51] 2025-06-04 05:42:17,654 | INFO     | maximum number of monitored processes: 6
[2025-06-04 07:42:51] 2025-06-04 05:42:17,654 | INFO     | aborting job monitoring since job object (job id=6677784116) has expired
[2025-06-04 07:42:51] 2025-06-04 05:42:18,623 | INFO     | --- collectZombieJob: --- 10, [1893417]
[2025-06-04 07:42:51] 2025-06-04 05:42:18,624 | INFO     | zombie collector waiting for pid 1893417
[2025-06-04 07:42:51] 2025-06-04 05:42:18,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:42:51] 2025-06-04 05:42:18,624 | INFO     | collected zombie processes
[2025-06-04 07:42:51] 2025-06-04 05:42:18,624 | INFO     | will attempt to kill all subprocesses of pid=1893417
[2025-06-04 07:42:51] 2025-06-04 05:42:18,663 | INFO     | process IDs to be killed: [1893417] (in reverse order)
[2025-06-04 07:42:51] 2025-06-04 05:42:18,689 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:42:51] 2025-06-04 05:42:18,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:42:51] 2025-06-04 05:42:18,690 | INFO     | did not find any defunct processes belonging to 1893417
[2025-06-04 07:42:51] 2025-06-04 05:42:18,691 | INFO     | did not find any defunct processes belonging to 1893417
[2025-06-04 07:42:51] 2025-06-04 05:42:18,691 | INFO     | ready for new job
[2025-06-04 07:42:51] 2025-06-04 05:42:18,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:42:51] 2025-06-04 05:42:18,692 | INFO     | **************************************
[2025-06-04 07:42:51] 2025-06-04 05:42:18,692 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:42:51] 2025-06-04 05:42:18,692 | INFO     | **************************************
[2025-06-04 07:42:51] 2025-06-04 05:42:18,692 | INFO     | 
[2025-06-04 07:42:51] 2025-06-04 05:42:18,693 | INFO     | architecture information:
[2025-06-04 07:42:51] 2025-06-04 05:42:18,693 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:42:51] 2025-06-04 05:42:18,702 | INFO     | cat /etc/os-release:
[2025-06-04 07:42:51] NAME="CentOS Linux"
[2025-06-04 07:42:51] VERSION="7 (Core)"
[2025-06-04 07:42:51] ID="centos"
[2025-06-04 07:42:51] ID_LIKE="rhel fedora"
[2025-06-04 07:42:51] VERSION_ID="7"
[2025-06-04 07:42:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:42:51] ANSI_COLOR="0;31"
[2025-06-04 07:42:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:42:51] HOME_URL="https://www.centos.org/"
[2025-06-04 07:42:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:42:51] 
[2025-06-04 07:42:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:42:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:42:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:42:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:42:51] 
[2025-06-04 07:42:51] 2025-06-04 05:42:18,702 | INFO     | **************************************
[2025-06-04 07:42:51] 2025-06-04 05:42:19,206 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 07:42:51] 2025-06-04 05:42:19,220 | INFO     | sufficient remaining disk space (828432711680 B)
[2025-06-04 07:42:51] 2025-06-04 05:42:19,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:42:51] 2025-06-04 05:42:19,220 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:42:51] 2025-06-04 05:42:19,220 | INFO     | update_server=False
[2025-06-04 07:42:51] 2025-06-04 05:42:19,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:42:51] 2025-06-04 05:42:19,220 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:42:51] 2025-06-04 05:42:19,220 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:42:51] 2025-06-04 05:42:19,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:42:51] 2025-06-04 05:42:19,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:42:51] 2025-06-04 05:42:19,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:42:51] 2025-06-04 05:42:19,221 | INFO     | aborting loop
[2025-06-04 07:42:51] 2025-06-04 05:42:19,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:42:51] 2025-06-04 05:42:19,281 | INFO     | all data control threads have been joined
[2025-06-04 07:42:51] 2025-06-04 05:42:19,601 | INFO     | all job control threads have been joined
[2025-06-04 07:42:51] 2025-06-04 05:42:19,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:42:51] 2025-06-04 05:42:20,103 | INFO     | all payload control threads have been joined
[2025-06-04 07:42:51] 2025-06-04 05:42:20,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:42:51] 2025-06-04 05:42:20,226 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:20,227 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:20,228 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:20,287 | INFO     | [data] control thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:20,418 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:20,607 | INFO     | [job] control thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:20,745 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:20,949 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:21,108 | INFO     | [payload] control thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:21,306 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:21,451 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:21,525 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:21,546 | INFO     | [job] validate thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:21,621 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:21,950 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:24,209 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:42:51] 2025-06-04 05:42:24,325 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321452484416)>', '<ExcThread(monitor, started 140320582911744)>']
[2025-06-04 07:42:51] 2025-06-04 05:42:25,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:42:51] 2025-06-04 05:42:25,254 | INFO     | [monitor] control thread has ended
[2025-06-04 07:42:51] 2025-06-04 05:42:29,335 | INFO     | all workflow threads have been joined
[2025-06-04 07:42:51] 2025-06-04 05:42:29,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:42:51] 2025-06-04 05:42:29,335 | INFO     | traces error code: 0
[2025-06-04 07:42:51] 2025-06-04 05:42:29,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:42:51] 2025-06-04 05:42:29,383 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:42:51] 2025-06-04 05:42:29,387 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:42:51] 2025-06-04 05:42:29,390 [wrapper] pilotpid: 1886916
[2025-06-04 07:42:51] 2025-06-04 05:42:29,393 [wrapper] Pilot exit status: 0
[2025-06-04 07:42:51] 2025-06-04 05:42:29,400 [wrapper] pandaids: 6677784116
[2025-06-04 07:42:51] 2025-06-04 05:42:29,416 [wrapper] cleanup supervisor_pilot 1905549 1886917
[2025-06-04 07:42:51] 2025-06-04 05:42:29,419 [wrapper] Test setup, not cleaning
[2025-06-04 07:42:51] 2025-06-04 05:42:29,421 [wrapper] apfmon messages muted
[2025-06-04 07:42:51] 2025-06-04 05:42:29,424 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:42:51] 2025-06-04 05:42:29,426 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:42:51]  *** Error codes and diagnostics ***
[2025-06-04 07:42:51]     "exeErrorCode": 0,
[2025-06-04 07:42:51]     "exeErrorDiag": "",
[2025-06-04 07:42:51]     "pilotErrorCode": 0,
[2025-06-04 07:42:51]     "pilotErrorDiag": "",
[2025-06-04 07:42:51]  *** Listing of results directory ***
[2025-06-04 07:42:51] total 391676
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc      5111 Jun  3 18:47 queuedata.json
[2025-06-04 07:42:51] -rwx------ 1 boinc boinc     37140 Jun  3 18:48 runpilot2-wrapper.sh
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc       100 Jun  4 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:42:51] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 06:16 run_atlas
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc       105 Jun  4 06:16 job.xml
[2025-06-04 07:42:51] -rw-r--r-- 2 boinc boinc 213644932 Jun  4 06:16 EVNT.45006593._001572.pool.root.1
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc      6680 Jun  4 06:16 init_data.xml
[2025-06-04 07:42:51] drwxrwx--x 2 boinc boinc      4096 Jun  4 06:16 shared
[2025-06-04 07:42:51] -rw-r--r-- 2 boinc boinc    508884 Jun  4 06:16 input.tar.gz
[2025-06-04 07:42:51] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:16 start_atlas.sh
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc         0 Jun  4 06:16 boinc_lockfile
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc      2525 Jun  4 06:16 pandaJob.out
[2025-06-04 07:42:51] -rw------- 1 boinc boinc    986077 Jun  4 06:16 agis_schedconf.cvmfs.json
[2025-06-04 07:42:51] -rw------- 1 boinc boinc   1603667 Jun  4 06:16 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:42:51] drwx------ 4 boinc boinc      4096 Jun  4 06:16 pilot3
[2025-06-04 07:42:51] -rw------- 1 boinc boinc 182110421 Jun  4 07:41 HITS.45006595._039209.pool.root.1
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc       530 Jun  4 07:41 boinc_task_state.xml
[2025-06-04 07:42:51] -rw------- 1 boinc boinc      1031 Jun  4 07:42 memory_monitor_summary.json
[2025-06-04 07:42:51] -rw------- 1 boinc boinc    246562 Jun  4 07:42 log.45006595._039209.job.log.tgz.1
[2025-06-04 07:42:51] -rw------- 1 boinc boinc        95 Jun  4 07:42 pilot_heartbeat.json
[2025-06-04 07:42:51] -rw------- 1 boinc boinc      7659 Jun  4 07:42 heartbeat.json
[2025-06-04 07:42:51] -rw------- 1 boinc boinc      4480 Jun  4 07:42 pilotlog.txt
[2025-06-04 07:42:51] -rw------- 1 boinc boinc    496310 Jun  4 07:42 log.45006595._039209.job.log.1
[2025-06-04 07:42:51] -rw------- 1 boinc boinc       357 Jun  4 07:42 output.list
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc       620 Jun  4 07:42 runtime_log
[2025-06-04 07:42:51] -rw------- 1 boinc boinc    757760 Jun  4 07:42 result.tar.gz
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc      8738 Jun  4 07:42 runtime_log.err
[2025-06-04 07:42:51] -rw------- 1 boinc boinc       659 Jun  4 07:42 LXpKDmNzjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm88kKDm3AHZRn.diag
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc      8192 Jun  4 07:42 boinc_mmap_file
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc        27 Jun  4 07:42 wrapper_checkpoint.txt
[2025-06-04 07:42:51] -rw-r--r-- 1 boinc boinc     22355 Jun  4 07:42 stderr.txt
[2025-06-04 07:42:51] HITS file was successfully produced:
[2025-06-04 07:42:51] -rw------- 1 boinc boinc 182110421 Jun  4 07:41 shared/HITS.pool.root.1
[2025-06-04 07:42:51]  *** Contents of shared directory: ***
[2025-06-04 07:42:51] total 387748
[2025-06-04 07:42:51] -rw-r--r-- 2 boinc boinc 213644932 Jun  4 06:16 ATLAS.root_0
[2025-06-04 07:42:51] -rw-r--r-- 2 boinc boinc    508884 Jun  4 06:16 input.tar.gz
[2025-06-04 07:42:51] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:16 start_atlas.sh
[2025-06-04 07:42:51] -rw------- 1 boinc boinc 182110421 Jun  4 07:41 HITS.pool.root.1
[2025-06-04 07:42:51] -rw------- 1 boinc boinc    757760 Jun  4 07:42 result.tar.gz
07:42:53 (1883275): run_atlas exited; CPU time 14658.590511
07:42:53 (1883275): called boinc_finish(0)

</stderr_txt>
]]>

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