Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:33:50 (10213): wrapper (7.7.26015): starting
06:33:50 (10213): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 06:33:50] Arguments: --nthreads 8
[2025-06-04 06:33:50] Threads: 8
[2025-06-04 06:33:50] Checking for CVMFS
[2025-06-04 06:33:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 06:33:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 06:33:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 06:33:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 06:33:52] 2.11.2.0 25379 32846 99796 146767 1 154 18777959 25165824 4311 130560 0 17188942 99.848 18347527 2601 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 06:33:52] CVMFS is ok
[2025-06-04 06:33:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:33:52] Checking for apptainer binary...
[2025-06-04 06:33:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 06:33:52] Running /usr/bin/apptainer --version
[2025-06-04 06:33:52] apptainer version 1.3.2-1.el7
[2025-06-04 06:33:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:33:54] cg-vwn336.simple-grid.lan
[2025-06-04 06:33:54] apptainer works
[2025-06-04 06:33:54] Set ATHENA_PROC_NUMBER=8
[2025-06-04 06:33:54] Set ATHENA_CORE_NUMBER=8
[2025-06-04 06:33:54] Starting ATLAS job with PandaID=6677783198
[2025-06-04 06:33:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:39:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:39:41] 2025-06-04 08:11:14,137 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6677783198/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:39:41] 2025-06-04 08:11:14,138 | INFO     | extracted standard info from prmon json
[2025-06-04 10:39:41] 2025-06-04 08:11:14,138 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:39:41] 2025-06-04 08:11:14,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:39:41] 2025-06-04 08:11:14,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:39:41] 2025-06-04 08:11:14,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:39:41] 2025-06-04 08:11:14,143 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:39:41] 2025-06-04 08:11:14,144 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,146 | INFO     | sum of deviations: 12239528000.000011
[2025-06-04 10:39:41] 2025-06-04 08:11:14,146 | INFO     | mean x: 1749018120.0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,146 | INFO     | mean y: 2459392.0805687206
[2025-06-04 10:39:41] 2025-06-04 08:11:14,146 | INFO     | -- intersect: -7346789305.324605
[2025-06-04 10:39:41] 2025-06-04 08:11:14,146 | INFO     | intersect: -7346789305.324605
[2025-06-04 10:39:41] 2025-06-04 08:11:14,146 | INFO     | chi2: 2.4282889582666196
[2025-06-04 10:39:41] 2025-06-04 08:11:14,147 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 10:39:41] 2025-06-04 08:11:14,156 | INFO     | sum of deviations: 25594545980.999996
[2025-06-04 10:39:41] 2025-06-04 08:11:14,156 | INFO     | mean x: 1749017967.5
[2025-06-04 10:39:41] 2025-06-04 08:11:14,156 | INFO     | mean y: 2469262.6796116503
[2025-06-04 10:39:41] 2025-06-04 08:11:14,156 | INFO     | -- intersect: -16512274897.493145
[2025-06-04 10:39:41] 2025-06-04 08:11:14,156 | INFO     | intersect: -16512274897.493145
[2025-06-04 10:39:41] 2025-06-04 08:11:14,157 | INFO     | chi2: 1.655892050328678
[2025-06-04 10:39:41] 2025-06-04 08:11:14,157 | INFO     | current chi2=1.655892050328678 (change=31.808278224404564 %)
[2025-06-04 10:39:41] 2025-06-04 08:11:14,157 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,159 | INFO     | sum of deviations: 24818276511.999992
[2025-06-04 10:39:41] 2025-06-04 08:11:14,159 | INFO     | mean x: 1749017815.0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,159 | INFO     | mean y: 2468648.0049751243
[2025-06-04 10:39:41] 2025-06-04 08:11:14,159 | INFO     | -- intersect: -17236449417.857376
[2025-06-04 10:39:41] 2025-06-04 08:11:14,159 | INFO     | intersect: -17236449417.857376
[2025-06-04 10:39:41] 2025-06-04 08:11:14,160 | INFO     | chi2: 1.6570929094516442
[2025-06-04 10:39:41] 2025-06-04 08:11:14,160 | INFO     | current chi2=1.6570929094516442 (change=-0.07252037490776242 %)
[2025-06-04 10:39:41] 2025-06-04 08:11:14,160 | INFO     | right removable region: 200
[2025-06-04 10:39:41] 2025-06-04 08:11:14,160 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 10:39:41] 2025-06-04 08:11:14,162 | INFO     | sum of deviations: -22572582343.5
[2025-06-04 10:39:41] 2025-06-04 08:11:14,162 | INFO     | mean x: 1749018272.5
[2025-06-04 10:39:41] 2025-06-04 08:11:14,162 | INFO     | mean y: 2485398.791262136
[2025-06-04 10:39:41] 2025-06-04 08:11:14,162 | INFO     | -- intersect: 14567326194.203255
[2025-06-04 10:39:41] 2025-06-04 08:11:14,162 | INFO     | intersect: 14567326194.203255
[2025-06-04 10:39:41] 2025-06-04 08:11:14,163 | INFO     | chi2: 0.8838787707319127
[2025-06-04 10:39:41] 2025-06-04 08:11:14,163 | INFO     | current chi2=0.8838787707319127 (change=63.60075815018119 %)
[2025-06-04 10:39:41] 2025-06-04 08:11:14,163 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,165 | INFO     | sum of deviations: -17579547727.0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,165 | INFO     | mean x: 1749018425.0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,165 | INFO     | mean y: 2481414.353233831
[2025-06-04 10:39:41] 2025-06-04 08:11:14,165 | INFO     | -- intersect: 12213340957.67658
[2025-06-04 10:39:41] 2025-06-04 08:11:14,165 | INFO     | intersect: 12213340957.67658
[2025-06-04 10:39:41] 2025-06-04 08:11:14,165 | INFO     | chi2: 0.8600162455905319
[2025-06-04 10:39:41] 2025-06-04 08:11:14,166 | INFO     | current chi2=0.8600162455905319 (change=2.6997509083311213 %)
[2025-06-04 10:39:41] 2025-06-04 08:11:14,166 | INFO     | left removable region: 20
[2025-06-04 10:39:41] 2025-06-04 08:11:14,166 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,167 | INFO     | sum of deviations: 4065957501.0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,167 | INFO     | mean x: 1749018394.5
[2025-06-04 10:39:41] 2025-06-04 08:11:14,167 | INFO     | mean y: 2484538.9111111113
[2025-06-04 10:39:41] 2025-06-04 08:11:14,168 | INFO     | -- intersect: -3930069299.107963
[2025-06-04 10:39:41] 2025-06-04 08:11:14,168 | INFO     | intersect: -3930069299.107963
[2025-06-04 10:39:41] 2025-06-04 08:11:14,168 | INFO     | chi2: 0.0003105875907174149
[2025-06-04 10:39:41] 2025-06-04 08:11:14,168 | INFO     | -- intersect: -3930069299.107963
[2025-06-04 10:39:41] 2025-06-04 08:11:14,168 | INFO     | current memory leak: 2.25 B/s (using 180 data points, chi2=0.00)
[2025-06-04 10:39:41] 2025-06-04 08:11:14,169 | INFO     | ..............................
[2025-06-04 10:39:41] 2025-06-04 08:11:14,169 | INFO     | . Timing measurements:
[2025-06-04 10:39:41] 2025-06-04 08:11:14,169 | INFO     | . get job = 0 s
[2025-06-04 10:39:41] 2025-06-04 08:11:14,169 | INFO     | . initial setup = 2 s
[2025-06-04 10:39:41] 2025-06-04 08:11:14,169 | INFO     | . payload setup = 13 s
[2025-06-04 10:39:41] 2025-06-04 08:11:14,170 | INFO     | . stage-in = 0 s
[2025-06-04 10:39:41] 2025-06-04 08:11:14,170 | INFO     | . payload execution = 12879 s
[2025-06-04 10:39:41] 2025-06-04 08:11:14,170 | INFO     | . stage-out = 2 s
[2025-06-04 10:39:41] 2025-06-04 08:11:14,170 | INFO     | . log creation = 0 s
[2025-06-04 10:39:41] 2025-06-04 08:11:14,170 | INFO     | ..............................
[2025-06-04 10:39:41] 2025-06-04 08:11:14,293 | INFO     | 
[2025-06-04 10:39:41] 2025-06-04 08:11:14,294 | INFO     | job summary report
[2025-06-04 10:39:41] 2025-06-04 08:11:14,294 | INFO     | --------------------------------------------------
[2025-06-04 10:39:41] 2025-06-04 08:11:14,294 | INFO     | PanDA job id: 6677783198
[2025-06-04 10:39:41] 2025-06-04 08:11:14,294 | INFO     | task id: 45006595
[2025-06-04 10:39:41] 2025-06-04 08:11:14,294 | INFO     | errors: (none)
[2025-06-04 10:39:41] 2025-06-04 08:11:14,294 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:39:41] 2025-06-04 08:11:14,294 | INFO     | pilot state: finished 
[2025-06-04 10:39:41] 2025-06-04 08:11:14,294 | INFO     | transexitcode: 0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,295 | INFO     | exeerrorcode: 0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,295 | INFO     | exeerrordiag: 
[2025-06-04 10:39:41] 2025-06-04 08:11:14,295 | INFO     | exitcode: 0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,295 | INFO     | exitmsg: OK
[2025-06-04 10:39:41] 2025-06-04 08:11:14,295 | INFO     | cpuconsumptiontime: 49265 s
[2025-06-04 10:39:41] 2025-06-04 08:11:14,295 | INFO     | nevents: 400
[2025-06-04 10:39:41] 2025-06-04 08:11:14,295 | INFO     | neventsw: 0
[2025-06-04 10:39:41] 2025-06-04 08:11:14,295 | INFO     | pid: 22581
[2025-06-04 10:39:41] 2025-06-04 08:11:14,295 | INFO     | pgrp: 22581
[2025-06-04 10:39:41] 2025-06-04 08:11:14,295 | INFO     | corecount: 8
[2025-06-04 10:39:41] 2025-06-04 08:11:14,296 | INFO     | event service: False
[2025-06-04 10:39:41] 2025-06-04 08:11:14,296 | INFO     | sizes: {0: 2405013, 1: 2405212, 2: 2405212, 11: 2405446, 12: 2405474, 12896: 2434805, 12899: 2443746, 12902: 2443802, 12993: 2443972}
[2025-06-04 10:39:41] 2025-06-04 08:11:14,296 | INFO     | --------------------------------------------------
[2025-06-04 10:39:41] 2025-06-04 08:11:14,296 | INFO     | 
[2025-06-04 10:39:41] 2025-06-04 08:11:14,301 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 10:39:41] 2025-06-04 08:11:14,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,759 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,759 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,760 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:39:41] 2025-06-04 08:11:14,761 | INFO     | job 6677783198 has completed (purged errors)
[2025-06-04 10:39:41] 2025-06-04 08:11:14,761 | INFO     | overall cleanup function is called
[2025-06-04 10:39:41] 2025-06-04 08:11:15,770 | INFO     | --- collectZombieJob: --- 10, [22581]
[2025-06-04 10:39:41] 2025-06-04 08:11:15,770 | INFO     | zombie collector waiting for pid 22581
[2025-06-04 10:39:41] 2025-06-04 08:11:15,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:39:41] 2025-06-04 08:11:15,770 | INFO     | collected zombie processes
[2025-06-04 10:39:41] 2025-06-04 08:11:15,770 | INFO     | will attempt to kill all subprocesses of pid=22581
[2025-06-04 10:39:41] 2025-06-04 08:11:15,888 | INFO     | process IDs to be killed: [22581] (in reverse order)
[2025-06-04 10:39:41] 2025-06-04 08:11:16,909 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:39:41] 2025-06-04 08:11:16,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:39:41] 2025-06-04 08:11:16,913 | INFO     | did not find any defunct processes belonging to 22581
[2025-06-04 10:39:41] 2025-06-04 08:11:16,916 | INFO     | did not find any defunct processes belonging to 22581
[2025-06-04 10:39:41] 2025-06-04 08:11:16,917 | INFO     | ready for new job
[2025-06-04 10:39:41] 2025-06-04 08:11:16,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:39:41] 2025-06-04 08:11:16,922 | INFO     | **************************************
[2025-06-04 10:39:41] 2025-06-04 08:11:16,923 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:39:41] 2025-06-04 08:11:16,923 | INFO     | **************************************
[2025-06-04 10:39:41] 2025-06-04 08:11:16,923 | INFO     | 
[2025-06-04 10:39:41] 2025-06-04 08:11:16,924 | INFO     | pilot is running in a VM
[2025-06-04 10:39:41] 2025-06-04 08:11:16,924 | INFO     | architecture information:
[2025-06-04 10:39:41] 2025-06-04 08:11:16,936 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:39:41] 2025-06-04 08:11:17,145 | INFO     | cat /etc/os-release:
[2025-06-04 10:39:41] NAME="CentOS Linux"
[2025-06-04 10:39:41] VERSION="7 (Core)"
[2025-06-04 10:39:41] ID="centos"
[2025-06-04 10:39:41] ID_LIKE="rhel fedora"
[2025-06-04 10:39:41] VERSION_ID="7"
[2025-06-04 10:39:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:39:41] ANSI_COLOR="0;31"
[2025-06-04 10:39:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:39:41] HOME_URL="https://www.centos.org/"
[2025-06-04 10:39:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:39:41] 
[2025-06-04 10:39:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:39:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:39:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:39:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:39:41] 
[2025-06-04 10:39:41] 2025-06-04 08:11:17,146 | INFO     | **************************************
[2025-06-04 10:39:41] 2025-06-04 08:11:17,649 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 10:39:41] 2025-06-04 08:11:17,833 | INFO     | sufficient remaining disk space (496734568448 B)
[2025-06-04 10:39:41] 2025-06-04 08:11:17,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:39:41] 2025-06-04 08:11:17,834 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:39:41] 2025-06-04 08:11:17,834 | INFO     | update_server=False
[2025-06-04 10:39:41] 2025-06-04 08:11:17,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:39:41] 2025-06-04 08:11:17,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:39:41] 2025-06-04 08:11:17,835 | INFO     | aborting loop
[2025-06-04 10:39:41] 2025-06-04 08:11:18,039 | INFO     | all job control threads have been joined
[2025-06-04 10:39:41] 2025-06-04 08:11:18,162 | INFO     | all payload control threads have been joined
[2025-06-04 10:39:41] 2025-06-04 08:11:18,546 | INFO     | all data control threads have been joined
[2025-06-04 10:39:41] 2025-06-04 08:11:18,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:39:41] 2025-06-04 08:11:18,764 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:39:41] 2025-06-04 08:11:18,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:39:41] 2025-06-04 08:11:18,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:39:41] 2025-06-04 08:11:18,841 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:18,842 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,015 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,039 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,046 | INFO     | [job] control thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,084 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,168 | INFO     | [payload] control thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,223 | INFO     | [job] validate thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:39:41] 2025-06-04 08:11:19,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:39:41] 2025-06-04 08:11:19,516 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,552 | INFO     | [data] control thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,580 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,695 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:19,786 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:20,313 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:20,560 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:23,378 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:39:41] 2025-06-04 08:11:24,370 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140315781060416)>', '<ExcThread(monitor, started 140315323242240)>']
[2025-06-04 10:39:41] 2025-06-04 08:11:24,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:39:41] 2025-06-04 08:11:24,800 | INFO     | [monitor] control thread has ended
[2025-06-04 10:39:41] 2025-06-04 08:11:29,396 | INFO     | all workflow threads have been joined
[2025-06-04 10:39:41] 2025-06-04 08:11:29,396 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:39:41] 2025-06-04 08:11:29,396 | INFO     | traces error code: 0
[2025-06-04 10:39:41] 2025-06-04 08:11:29,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:39:41] 2025-06-04 08:11:29,781 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:39:41] 2025-06-04 08:11:29,871 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:39:41] 2025-06-04 08:11:29,969 [wrapper] pilotpid: 14027
[2025-06-04 10:39:41] 2025-06-04 08:11:30,059 [wrapper] Pilot exit status: 0
[2025-06-04 10:39:41] 2025-06-04 08:11:30,416 [wrapper] pandaids: 6677783198
[2025-06-04 10:39:41] 2025-06-04 08:11:31,223 [wrapper] cleanup supervisor_pilot 26044 14028
[2025-06-04 10:39:41] 2025-06-04 08:11:31,353 [wrapper] Test setup, not cleaning
[2025-06-04 10:39:41] 2025-06-04 08:11:31,440 [wrapper] apfmon messages muted
[2025-06-04 10:39:41] 2025-06-04 08:11:31,525 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:39:41] 2025-06-04 08:11:31,638 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:39:41]  *** Error codes and diagnostics ***
[2025-06-04 10:39:41]     "exeErrorCode": 0,
[2025-06-04 10:39:41]     "exeErrorDiag": "",
[2025-06-04 10:39:41]     "pilotErrorCode": 0,
[2025-06-04 10:39:41]     "pilotErrorDiag": "",
[2025-06-04 10:39:41]  *** Listing of results directory ***
[2025-06-04 10:39:41] total 391396
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 10:39:41] -rwx------. 1 boinc boinc     37140 Jun  3 18:47 runpilot2-wrapper.sh
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc      5111 Jun  3 18:47 queuedata.json
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc       100 Jun  4 06:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:39:41] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 06:33 run_atlas
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc       105 Jun  4 06:33 job.xml
[2025-06-04 10:39:41] -rw-r--r--. 2 boinc boinc 216522488 Jun  4 06:33 EVNT.45006593._001571.pool.root.1
[2025-06-04 10:39:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:33 start_atlas.sh
[2025-06-04 10:39:41] drwxrwx--x. 2 boinc boinc        68 Jun  4 06:33 shared
[2025-06-04 10:39:41] -rw-r--r--. 2 boinc boinc    508879 Jun  4 06:33 input.tar.gz
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc      6391 Jun  4 06:33 init_data.xml
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc         0 Jun  4 06:33 boinc_lockfile
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc      2525 Jun  4 06:33 pandaJob.out
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc    986077 Jun  4 06:34 agis_schedconf.cvmfs.json
[2025-06-04 10:39:41] drwx------. 4 boinc boinc      4096 Jun  4 06:34 pilot3
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc 177447330 Jun  4 10:08 HITS.45006595._039162.pool.root.1
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc       531 Jun  4 10:08 boinc_task_state.xml
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc      1021 Jun  4 10:09 memory_monitor_summary.json
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc   1603667 Jun  4 10:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc    366477 Jun  4 10:09 log.45006595._039162.job.log.tgz.1
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc        95 Jun  4 10:10 pilot_heartbeat.json
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc      7686 Jun  4 10:11 heartbeat.json
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc      4416 Jun  4 10:11 pilotlog.txt
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc   1134776 Jun  4 10:11 log.45006595._039162.job.log.1
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc       357 Jun  4 10:11 output.list
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc       620 Jun  4 10:11 runtime_log
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc   1515520 Jun  4 10:11 result.tar.gz
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc      8659 Jun  4 10:11 runtime_log.err
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc       656 Jun  4 10:11 NzpLDmKyjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIJZKDmvIuXtn.diag
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc      8192 Jun  4 10:39 boinc_mmap_file
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc        28 Jun  4 10:39 wrapper_checkpoint.txt
[2025-06-04 10:39:41] -rw-r--r--. 1 boinc boinc     20506 Jun  4 10:39 stderr.txt
[2025-06-04 10:39:41] HITS file was successfully produced:
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc 177447330 Jun  4 10:08 shared/HITS.pool.root.1
[2025-06-04 10:39:41]  *** Contents of shared directory: ***
[2025-06-04 10:39:41] total 386736
[2025-06-04 10:39:41] -rw-r--r--. 2 boinc boinc 216522488 Jun  4 06:33 ATLAS.root_0
[2025-06-04 10:39:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 06:33 start_atlas.sh
[2025-06-04 10:39:41] -rw-r--r--. 2 boinc boinc    508879 Jun  4 06:33 input.tar.gz
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc 177447330 Jun  4 10:08 HITS.pool.root.1
[2025-06-04 10:39:41] -rw-------. 1 boinc boinc   1515520 Jun  4 10:11 result.tar.gz
10:39:43 (10213): run_atlas exited; CPU time 49428.223364
10:39:43 (10213): called boinc_finish(0)

</stderr_txt>
]]>

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