Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:29:08 (899092): wrapper (7.7.26015): starting
15:29:08 (899092): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:29:08] Arguments: --nthreads 8
[2025-06-03 15:29:08] Threads: 8
[2025-06-03 15:29:08] Checking for CVMFS
[2025-06-03 15:29:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:29:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:29:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:29:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:29:09] 2.12.6.0 9586 318 66812 146753 3 186 30657112 32935936 3318 16776704 0 1506486 99.998 80704 42950 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 15:29:09] CVMFS is ok
[2025-06-03 15:29:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:29:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:29:09] Further information can be found at the LHC@home message board.
[2025-06-03 15:29:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:29:09] Checking for apptainer binary...
[2025-06-03 15:29:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:29:09] Running /usr/bin/apptainer --version
[2025-06-03 15:29:09] apptainer version 1.4.1-1.el9
[2025-06-03 15:29:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:29:09] c-8-36.aglt2.org
[2025-06-03 15:29:09] apptainer works
[2025-06-03 15:29:09] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:29:09] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:29:09] Starting ATLAS job with PandaID=6677783071
[2025-06-03 15:29:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:04:03]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:04:03]  filesize=301664
[2025-06-03 17:04:03]  filetype=log
[2025-06-03 17:04:03]  guid=a2fe5552-d247-4681-aeb1-229494236a9a
[2025-06-03 17:04:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 17:04:03]  is_altstaged=None
[2025-06-03 17:04:03]  is_tar=False
[2025-06-03 17:04:03]  lfn=log.45006595._039035.job.log.tgz.1
[2025-06-03 17:04:03]  mtime=0
[2025-06-03 17:04:03]  protocol_id=None
[2025-06-03 17:04:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 17:04:03]  replicas=None
[2025-06-03 17:04:03]  scope=mc23_13p6TeV
[2025-06-03 17:04:03]  status=None
[2025-06-03 17:04:03]  status_code=0
[2025-06-03 17:04:03]  storage_token=
[2025-06-03 17:04:03]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6677783071/log.45006595._039035.job.log.tgz.1
[2025-06-03 17:04:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/9f/log.45006595._039035.job.log.tgz.1
[2025-06-03 17:04:03]  workdir=None
[2025-06-03 17:04:03] ]
[2025-06-03 17:04:03] 2025-06-03 21:03:34,573 | INFO     | transferring file log.45006595._039035.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6677783071/log.45006595._039035.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 17:04:03] 2025-06-03 21:03:34,574 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6677783071/log.45006595._039035.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._039035.job
[2025-06-03 17:04:03] 2025-06-03 21:03:34,584 | INFO     | adding to output.list: log.45006595._039035.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/9f/log.45006595._039035.job.log.tg
[2025-06-03 17:04:03] 2025-06-03 21:03:34,584 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 17:04:03] 2025-06-03 21:03:34,584 | INFO     | summary of transferred files:
[2025-06-03 17:04:03] 2025-06-03 21:03:34,584 | INFO     |  -- lfn=log.45006595._039035.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 17:04:03] 2025-06-03 21:03:34,585 | INFO     | stage-out finished correctly
[2025-06-03 17:04:03] 2025-06-03 21:03:35,921 | INFO     | monitor loop #410: job 0:6677783071 is in state 'finished'
[2025-06-03 17:04:03] 2025-06-03 21:03:35,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:04:03] 2025-06-03 21:03:37,037 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 17:04:03] 2025-06-03 21:03:38,107 | INFO     | job 6677783071 has state=finished
[2025-06-03 17:04:03] 2025-06-03 21:03:38,107 | INFO     | preparing for final server update for job 6677783071 in state='finished'
[2025-06-03 17:04:03] 2025-06-03 21:03:38,108 | INFO     | this job has now completed (state=finished)
[2025-06-03 17:04:03] 2025-06-03 21:03:38,108 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 17:04:03] 2025-06-03 21:03:38,108 | INFO     | log transfer has been attempted: DONE
[2025-06-03 17:04:03] 2025-06-03 21:03:38,108 | INFO     | job 6677783071 has finished - writing final server update
[2025-06-03 17:04:03] 2025-06-03 21:03:38,108 | INFO     | total number of processed events: 400 (read)
[2025-06-03 17:04:03] 2025-06-03 21:03:38,122 | INFO     | executing command: lscpu
[2025-06-03 17:04:03] 2025-06-03 21:03:38,172 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 17:04:03] 2025-06-03 21:03:38,424 | INFO     | monitor loop #411: job 0:6677783071 is in state 'finished'
[2025-06-03 17:04:03] 2025-06-03 21:03:38,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 17:04:03] 2025-06-03 21:03:40,385 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 17:04:03] 2025-06-03 21:03:40,385 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677783071/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:04:03] 2025-06-03 21:03:40,385 | INFO     | extracted standard info from prmon json
[2025-06-03 17:04:03] 2025-06-03 21:03:40,385 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:04:03] 2025-06-03 21:03:40,386 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:04:03] 2025-06-03 21:03:40,386 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:04:03] 2025-06-03 21:03:40,386 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:04:03] 2025-06-03 21:03:40,387 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:04:03] 2025-06-03 21:03:40,387 | INFO     | sum of square deviations: 197203697.5
[2025-06-03 17:04:03] 2025-06-03 21:03:40,388 | INFO     | sum of deviations: 13739976140.5
[2025-06-03 17:04:03] 2025-06-03 21:03:40,388 | INFO     | mean x: 1748981872.5
[2025-06-03 17:04:03] 2025-06-03 21:03:40,388 | INFO     | mean y: 2111302.0581395347
[2025-06-03 17:04:03] 2025-06-03 21:03:40,388 | INFO     | -- intersect: -121856502420.52187
[2025-06-03 17:04:03] 2025-06-03 21:03:40,388 | INFO     | intersect: -121856502420.52187
[2025-06-03 17:04:03] 2025-06-03 21:03:40,388 | INFO     | chi2: 0.8704857977836786
[2025-06-03 17:04:03] 2025-06-03 21:03:40,388 | INFO     | -- intersect: -121856502420.52187
[2025-06-03 17:04:03] 2025-06-03 21:03:40,388 | INFO     | current memory leak: 69.67 B/s (using 86 data points, chi2=0.87)
[2025-06-03 17:04:03] 2025-06-03 21:03:40,389 | INFO     | ..............................
[2025-06-03 17:04:03] 2025-06-03 21:03:40,389 | INFO     | . Timing measurements:
[2025-06-03 17:04:03] 2025-06-03 21:03:40,389 | INFO     | . get job = 0 s
[2025-06-03 17:04:03] 2025-06-03 21:03:40,389 | INFO     | . initial setup = 2 s
[2025-06-03 17:04:03] 2025-06-03 21:03:40,389 | INFO     | . payload setup = 3 s
[2025-06-03 17:04:03] 2025-06-03 21:03:40,389 | INFO     | . stage-in = 0 s
[2025-06-03 17:04:03] 2025-06-03 21:03:40,389 | INFO     | . payload execution = 5637 s
[2025-06-03 17:04:03] 2025-06-03 21:03:40,389 | INFO     | . stage-out = 0 s
[2025-06-03 17:04:03] 2025-06-03 21:03:40,389 | INFO     | . log creation = 0 s
[2025-06-03 17:04:03] 2025-06-03 21:03:40,389 | INFO     | ..............................
[2025-06-03 17:04:03] 2025-06-03 21:03:40,945 | INFO     | 
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | job summary report
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | --------------------------------------------------
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | PanDA job id: 6677783071
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | task id: 45006595
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | errors: (none)
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | pilot state: finished 
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | transexitcode: 0
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | exeerrorcode: 0
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | exeerrordiag: 
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | exitcode: 0
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | exitmsg: OK
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | cpuconsumptiontime: 39322 s
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | nevents: 400
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | neventsw: 0
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | pid: 909158
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | pgrp: 909158
[2025-06-03 17:04:03] 2025-06-03 21:03:40,946 | INFO     | corecount: 8
[2025-06-03 17:04:03] 2025-06-03 21:03:40,947 | INFO     | event service: False
[2025-06-03 17:04:03] 2025-06-03 21:03:40,947 | INFO     | sizes: {0: 2405182, 2: 2405388, 11: 2405416, 5644: 2431903, 5645: 2440844, 5648: 2440900, 5651: 2441198}
[2025-06-03 17:04:03] 2025-06-03 21:03:40,947 | INFO     | --------------------------------------------------
[2025-06-03 17:04:03] 2025-06-03 21:03:40,947 | INFO     | 
[2025-06-03 17:04:03] 2025-06-03 21:03:40,947 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 17:04:03] 2025-06-03 21:03:40,957 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,957 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,957 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,957 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,958 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:04:03] 2025-06-03 21:03:40,959 | INFO     | job 6677783071 has completed (purged errors)
[2025-06-03 17:04:03] 2025-06-03 21:03:40,959 | INFO     | overall cleanup function is called
[2025-06-03 17:04:03] 2025-06-03 21:03:41,960 | INFO     | --- collectZombieJob: --- 10, [909158]
[2025-06-03 17:04:03] 2025-06-03 21:03:41,961 | INFO     | zombie collector waiting for pid 909158
[2025-06-03 17:04:03] 2025-06-03 21:03:41,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:04:03] 2025-06-03 21:03:41,961 | INFO     | collected zombie processes
[2025-06-03 17:04:03] 2025-06-03 21:03:41,961 | INFO     | will attempt to kill all subprocesses of pid=909158
[2025-06-03 17:04:03] 2025-06-03 21:03:42,104 | INFO     | process IDs to be killed: [909158] (in reverse order)
[2025-06-03 17:04:03] 2025-06-03 21:03:42,142 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:04:03] 2025-06-03 21:03:42,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:04:03] 2025-06-03 21:03:42,147 | INFO     | did not find any defunct processes belonging to 909158
[2025-06-03 17:04:03] 2025-06-03 21:03:42,151 | INFO     | did not find any defunct processes belonging to 909158
[2025-06-03 17:04:03] 2025-06-03 21:03:42,151 | INFO     | ready for new job
[2025-06-03 17:04:03] 2025-06-03 21:03:42,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:04:03] 2025-06-03 21:03:42,152 | INFO     | **************************************
[2025-06-03 17:04:03] 2025-06-03 21:03:42,152 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:04:03] 2025-06-03 21:03:42,152 | INFO     | **************************************
[2025-06-03 17:04:03] 2025-06-03 21:03:42,152 | INFO     | 
[2025-06-03 17:04:03] 2025-06-03 21:03:42,164 | INFO     | architecture information:
[2025-06-03 17:04:03] 2025-06-03 21:03:42,165 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:04:03] 2025-06-03 21:03:42,171 | INFO     | cat /etc/os-release:
[2025-06-03 17:04:03] NAME="CentOS Linux"
[2025-06-03 17:04:03] VERSION="7 (Core)"
[2025-06-03 17:04:03] ID="centos"
[2025-06-03 17:04:03] ID_LIKE="rhel fedora"
[2025-06-03 17:04:03] VERSION_ID="7"
[2025-06-03 17:04:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:04:03] ANSI_COLOR="0;31"
[2025-06-03 17:04:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:04:03] HOME_URL="https://www.centos.org/"
[2025-06-03 17:04:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:04:04] 
[2025-06-03 17:04:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:04:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:04:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:04:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:04:04] 
[2025-06-03 17:04:04] 2025-06-03 21:03:42,171 | INFO     | **************************************
[2025-06-03 17:04:04] 2025-06-03 21:03:42,672 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 17:04:04] 2025-06-03 21:03:42,680 | INFO     | sufficient remaining disk space (74295803904 B)
[2025-06-03 17:04:04] 2025-06-03 21:03:42,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:04:04] 2025-06-03 21:03:42,680 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:04:04] 2025-06-03 21:03:42,680 | INFO     | update_server=False
[2025-06-03 17:04:04] 2025-06-03 21:03:42,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:04:04] 2025-06-03 21:03:42,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:04:04] 2025-06-03 21:03:42,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:04:04] 2025-06-03 21:03:42,681 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 17:04:04] 2025-06-03 21:03:42,681 | INFO     | aborting loop
[2025-06-03 17:04:04] 2025-06-03 21:03:42,682 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:04:04] 2025-06-03 21:03:42,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:04:04] 2025-06-03 21:03:42,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:04:04] 2025-06-03 21:03:42,753 | INFO     | all job control threads have been joined
[2025-06-03 17:04:04] 2025-06-03 21:03:43,039 | INFO     | all payload control threads have been joined
[2025-06-03 17:04:04] 2025-06-03 21:03:43,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:04:04] 2025-06-03 21:03:43,536 | INFO     | all data control threads have been joined
[2025-06-03 17:04:04] 2025-06-03 21:03:43,683 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:43,687 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:43,752 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:43,758 | INFO     | [job] control thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:43,875 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:44,045 | INFO     | [payload] control thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:44,189 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:44,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:44,362 | INFO     | [job] validate thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:44,541 | INFO     | [data] control thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:44,569 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:44,658 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:44,687 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:45,040 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:45,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:04:04] 2025-06-03 21:03:46,461 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:47,100 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:04:04] 2025-06-03 21:03:48,215 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037956405056)>', '<ExcThread(monitor, started 140037316396800)>']
[2025-06-03 17:04:04] 2025-06-03 21:03:48,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:04:04] 2025-06-03 21:03:48,712 | INFO     | [monitor] control thread has ended
[2025-06-03 17:04:04] 2025-06-03 21:03:53,240 | INFO     | all workflow threads have been joined
[2025-06-03 17:04:04] 2025-06-03 21:03:53,240 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:04:04] 2025-06-03 21:03:53,240 | INFO     | traces error code: 0
[2025-06-03 17:04:04] 2025-06-03 21:03:53,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:04:04] 2025-06-03 21:03:53,305 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:04:04] 2025-06-03 21:03:53,307 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:04:04] 2025-06-03 21:03:53,309 [wrapper] pilotpid: 902698
[2025-06-03 17:04:04] 2025-06-03 21:03:53,310 [wrapper] Pilot exit status: 0
[2025-06-03 17:04:04] 2025-06-03 21:03:53,316 [wrapper] pandaids: 6677783071
[2025-06-03 17:04:04] 2025-06-03 21:03:53,344 [wrapper] cleanup supervisor_pilot 1083258 902699
[2025-06-03 17:04:04] 2025-06-03 21:03:53,345 [wrapper] Test setup, not cleaning
[2025-06-03 17:04:04] 2025-06-03 21:03:53,347 [wrapper] apfmon messages muted
[2025-06-03 17:04:04] 2025-06-03 21:03:53,349 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:04:04] 2025-06-03 21:03:53,350 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:04:04]  *** Error codes and diagnostics ***
[2025-06-03 17:04:04]     "exeErrorCode": 0,
[2025-06-03 17:04:04]     "exeErrorDiag": "",
[2025-06-03 17:04:04]     "pilotErrorCode": 0,
[2025-06-03 17:04:04]     "pilotErrorDiag": "",
[2025-06-03 17:04:04]  *** Listing of results directory ***
[2025-06-03 17:04:04] total 387668
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:42 queuedata.json
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:42 pilot3.tar.gz
[2025-06-03 17:04:04] -rwx------. 1 boincer umatlas     37140 Jun  3 12:44 runpilot2-wrapper.sh
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas       100 Jun  3 15:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:04:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 15:29 run_atlas
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas       105 Jun  3 15:29 job.xml
[2025-06-03 17:04:04] -rw-r--r--. 2 boincer umatlas 216786329 Jun  3 15:29 EVNT.45006593._001566.pool.root.1
[2025-06-03 17:04:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 15:29 start_atlas.sh
[2025-06-03 17:04:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 15:29 shared
[2025-06-03 17:04:04] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 15:29 input.tar.gz
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas         0 Jun  3 15:29 boinc_lockfile
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 15:29 pandaJob.out
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas    986893 Jun  3 15:29 agis_schedconf.cvmfs.json
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas   1603667 Jun  3 15:29 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:04:04] drwx------. 4 boincer umatlas      4096 Jun  3 15:29 pilot3
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas      6659 Jun  3 16:58 init_data.xml
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas        95 Jun  3 17:02 pilot_heartbeat.json
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas 174669749 Jun  3 17:03 HITS.45006595._039035.pool.root.1
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas       529 Jun  3 17:03 boinc_task_state.xml
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas      1032 Jun  3 17:03 memory_monitor_summary.json
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas    301664 Jun  3 17:03 log.45006595._039035.job.log.tgz.1
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas      7706 Jun  3 17:03 heartbeat.json
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas        27 Jun  3 17:03 wrapper_checkpoint.txt
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas      4476 Jun  3 17:03 pilotlog.txt
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas    538804 Jun  3 17:03 log.45006595._039035.job.log.1
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas       357 Jun  3 17:03 output.list
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas       620 Jun  3 17:03 runtime_log
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas    860160 Jun  3 17:03 result.tar.gz
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas       650 Jun  3 17:03 s2iMDmEvjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmh7kKDmpVpLfn.diag
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 17:03 runtime_log.err
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:04 boinc_mmap_file
[2025-06-03 17:04:04] -rw-r--r--. 1 boincer umatlas     21129 Jun  3 17:04 stderr.txt
[2025-06-03 17:04:04] HITS file was successfully produced:
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas 174669749 Jun  3 17:03 shared/HITS.pool.root.1
[2025-06-03 17:04:04]  *** Contents of shared directory: ***
[2025-06-03 17:04:04] total 383648
[2025-06-03 17:04:04] -rw-r--r--. 2 boincer umatlas 216786329 Jun  3 15:29 ATLAS.root_0
[2025-06-03 17:04:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 15:29 start_atlas.sh
[2025-06-03 17:04:04] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 15:29 input.tar.gz
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas 174669749 Jun  3 17:03 HITS.pool.root.1
[2025-06-03 17:04:04] -rw-------. 1 boincer umatlas    860160 Jun  3 17:03 result.tar.gz
17:04:05 (899092): run_atlas exited; CPU time 39451.846854
17:04:05 (899092): called boinc_finish(0)

</stderr_txt>
]]>

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