Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:26:45 (25029): wrapper (7.7.26015): starting
15:26:45 (25029): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:26:45] Arguments: --nthreads 8
[2025-06-03 15:26:45] Threads: 8
[2025-06-03 15:26:45] Checking for CVMFS
[2025-06-03 15:26:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:26:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:26:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:26:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:26:46] 2.11.2.0 2886 34613 72528 146753 3 56 16685641 20275200 1 130560 0 10812974 99.975 6452351 7850 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 15:26:46] CVMFS is ok
[2025-06-03 15:26:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:26:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:26:46] Further information can be found at the LHC@home message board.
[2025-06-03 15:26:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:26:46] Checking for apptainer binary...
[2025-06-03 15:26:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:26:46] Running /usr/bin/apptainer --version
[2025-06-03 15:26:46] apptainer version 1.3.2-1.el7
[2025-06-03 15:26:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:26:47] c-115-10.aglt2.org
[2025-06-03 15:26:47] apptainer works
[2025-06-03 15:26:47] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:26:47] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:26:47] Starting ATLAS job with PandaID=6677783153
[2025-06-03 15:26:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:09:23]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:09:23] 2025-06-03 21:09:03,210 | INFO     | sum of deviations: 8041431810.999999
[2025-06-03 17:09:23] 2025-06-03 21:09:03,210 | INFO     | mean x: 1748981874.5
[2025-06-03 17:09:23] 2025-06-03 21:09:03,210 | INFO     | mean y: 2472650.66
[2025-06-03 17:09:23] 2025-06-03 21:09:03,210 | INFO     | -- intersect: -45358640130.760704
[2025-06-03 17:09:23] 2025-06-03 21:09:03,210 | INFO     | intersect: -45358640130.760704
[2025-06-03 17:09:23] 2025-06-03 21:09:03,210 | INFO     | chi2: 1.479978095087502
[2025-06-03 17:09:23] 2025-06-03 21:09:03,211 | INFO     | sum of square deviations: 265828240.0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,211 | INFO     | sum of deviations: 7667068161.999999
[2025-06-03 17:09:23] 2025-06-03 21:09:03,211 | INFO     | mean x: 1748981722.0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,211 | INFO     | mean y: 2471358.642105263
[2025-06-03 17:09:23] 2025-06-03 21:09:03,211 | INFO     | -- intersect: -50441988856.21744
[2025-06-03 17:09:23] 2025-06-03 21:09:03,211 | INFO     | intersect: -50441988856.21744
[2025-06-03 17:09:23] 2025-06-03 21:09:03,212 | INFO     | chi2: 1.4837320403919323
[2025-06-03 17:09:23] 2025-06-03 21:09:03,212 | INFO     | current chi2=1.4837320403919323 (change=-0.2536487071592932 %)
[2025-06-03 17:09:23] 2025-06-03 21:09:03,212 | INFO     | right removable region: 94
[2025-06-03 17:09:23] 2025-06-03 21:09:03,212 | INFO     | sum of square deviations: 265828240.0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,213 | INFO     | sum of deviations: -5922975681.999999
[2025-06-03 17:09:23] 2025-06-03 21:09:03,213 | INFO     | mean x: 1748982027.0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,213 | INFO     | mean y: 2519621.094736842
[2025-06-03 17:09:23] 2025-06-03 21:09:03,213 | INFO     | -- intersect: 38971960994.878296
[2025-06-03 17:09:23] 2025-06-03 21:09:03,213 | INFO     | intersect: 38971960994.878296
[2025-06-03 17:09:23] 2025-06-03 21:09:03,213 | INFO     | chi2: 0.07156096525972568
[2025-06-03 17:09:23] 2025-06-03 21:09:03,213 | INFO     | current chi2=0.07156096525972568 (change=95.1647280796075 %)
[2025-06-03 17:09:23] 2025-06-03 21:09:03,214 | INFO     | sum of square deviations: 226022842.5
[2025-06-03 17:09:23] 2025-06-03 21:09:03,214 | INFO     | sum of deviations: -3038822085.5
[2025-06-03 17:09:23] 2025-06-03 21:09:03,214 | INFO     | mean x: 1748982179.5
[2025-06-03 17:09:23] 2025-06-03 21:09:03,214 | INFO     | mean y: 2508503.077777778
[2025-06-03 17:09:23] 2025-06-03 21:09:03,215 | INFO     | -- intersect: 23517148065.27391
[2025-06-03 17:09:23] 2025-06-03 21:09:03,215 | INFO     | intersect: 23517148065.27391
[2025-06-03 17:09:23] 2025-06-03 21:09:03,215 | INFO     | chi2: 0.053292675729842094
[2025-06-03 17:09:23] 2025-06-03 21:09:03,215 | INFO     | current chi2=0.053292675729842094 (change=25.528288311344127 %)
[2025-06-03 17:09:23] 2025-06-03 21:09:03,215 | INFO     | sum of square deviations: 190403570.0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,216 | INFO     | sum of deviations: 644453715.0000001
[2025-06-03 17:09:23] 2025-06-03 21:09:03,216 | INFO     | mean x: 1748982332.0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,216 | INFO     | mean y: 2492712.4
[2025-06-03 17:09:23] 2025-06-03 21:09:03,216 | INFO     | -- intersect: -5917239576.898797
[2025-06-03 17:09:23] 2025-06-03 21:09:03,216 | INFO     | intersect: -5917239576.898797
[2025-06-03 17:09:23] 2025-06-03 21:09:03,216 | INFO     | chi2: 0.00014100264059159782
[2025-06-03 17:09:23] 2025-06-03 21:09:03,216 | INFO     | current chi2=0.00014100264059159782 (change=99.73541835034446 %)
[2025-06-03 17:09:23] 2025-06-03 21:09:03,217 | INFO     | sum of square deviations: 158737860.0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,217 | INFO     | sum of deviations: 468343573.5
[2025-06-03 17:09:23] 2025-06-03 21:09:03,217 | INFO     | mean x: 1748982484.5
[2025-06-03 17:09:23] 2025-06-03 21:09:03,217 | INFO     | mean y: 2493559.9375
[2025-06-03 17:09:23] 2025-06-03 21:09:03,217 | INFO     | -- intersect: -5157741728.478498
[2025-06-03 17:09:23] 2025-06-03 21:09:03,217 | INFO     | intersect: -5157741728.478498
[2025-06-03 17:09:23] 2025-06-03 21:09:03,218 | INFO     | chi2: 0.00011181462292491306
[2025-06-03 17:09:23] 2025-06-03 21:09:03,218 | INFO     | current chi2=0.00011181462292491306 (change=20.700334081845583 %)
[2025-06-03 17:09:23] 2025-06-03 21:09:03,218 | INFO     | left removable region: 40
[2025-06-03 17:09:23] 2025-06-03 21:09:03,218 | INFO     | sum of square deviations: 48810217.5
[2025-06-03 17:09:23] 2025-06-03 21:09:03,218 | INFO     | sum of deviations: 50461914.5
[2025-06-03 17:09:23] 2025-06-03 21:09:03,218 | INFO     | mean x: 1748982911.5
[2025-06-03 17:09:23] 2025-06-03 21:09:03,218 | INFO     | mean y: 2496126.685185185
[2025-06-03 17:09:23] 2025-06-03 21:09:03,219 | INFO     | -- intersect: -1805670906.007797
[2025-06-03 17:09:23] 2025-06-03 21:09:03,219 | INFO     | intersect: -1805670906.007797
[2025-06-03 17:09:23] 2025-06-03 21:09:03,219 | INFO     | chi2: 3.0814578883361954e-05
[2025-06-03 17:09:23] 2025-06-03 21:09:03,219 | INFO     | -- intersect: -1805670906.007797
[2025-06-03 17:09:23] 2025-06-03 21:09:03,219 | INFO     | current memory leak: 1.03 B/s (using 54 data points, chi2=0.00)
[2025-06-03 17:09:23] 2025-06-03 21:09:03,220 | INFO     | ..............................
[2025-06-03 17:09:23] 2025-06-03 21:09:03,220 | INFO     | . Timing measurements:
[2025-06-03 17:09:23] 2025-06-03 21:09:03,220 | INFO     | . get job = 0 s
[2025-06-03 17:09:23] 2025-06-03 21:09:03,220 | INFO     | . initial setup = 2 s
[2025-06-03 17:09:23] 2025-06-03 21:09:03,220 | INFO     | . payload setup = 11 s
[2025-06-03 17:09:23] 2025-06-03 21:09:03,220 | INFO     | . stage-in = 0 s
[2025-06-03 17:09:23] 2025-06-03 21:09:03,220 | INFO     | . payload execution = 6080 s
[2025-06-03 17:09:23] 2025-06-03 21:09:03,220 | INFO     | . stage-out = 0 s
[2025-06-03 17:09:23] 2025-06-03 21:09:03,220 | INFO     | . log creation = 0 s
[2025-06-03 17:09:23] 2025-06-03 21:09:03,221 | INFO     | ..............................
[2025-06-03 17:09:23] 2025-06-03 21:09:03,306 | INFO     | 
[2025-06-03 17:09:23] 2025-06-03 21:09:03,307 | INFO     | job summary report
[2025-06-03 17:09:23] 2025-06-03 21:09:03,307 | INFO     | --------------------------------------------------
[2025-06-03 17:09:23] 2025-06-03 21:09:03,307 | INFO     | PanDA job id: 6677783153
[2025-06-03 17:09:23] 2025-06-03 21:09:03,307 | INFO     | task id: 45006595
[2025-06-03 17:09:23] 2025-06-03 21:09:03,308 | INFO     | errors: (none)
[2025-06-03 17:09:23] 2025-06-03 21:09:03,308 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:09:23] 2025-06-03 21:09:03,308 | INFO     | pilot state: finished 
[2025-06-03 17:09:23] 2025-06-03 21:09:03,308 | INFO     | transexitcode: 0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,309 | INFO     | exeerrorcode: 0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,309 | INFO     | exeerrordiag: 
[2025-06-03 17:09:23] 2025-06-03 21:09:03,309 | INFO     | exitcode: 0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,309 | INFO     | exitmsg: OK
[2025-06-03 17:09:23] 2025-06-03 21:09:03,309 | INFO     | cpuconsumptiontime: 45208 s
[2025-06-03 17:09:23] 2025-06-03 21:09:03,309 | INFO     | nevents: 400
[2025-06-03 17:09:23] 2025-06-03 21:09:03,310 | INFO     | neventsw: 0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,310 | INFO     | pid: 2786
[2025-06-03 17:09:23] 2025-06-03 21:09:03,310 | INFO     | pgrp: 2786
[2025-06-03 17:09:23] 2025-06-03 21:09:03,310 | INFO     | corecount: 8
[2025-06-03 17:09:23] 2025-06-03 21:09:03,310 | INFO     | event service: False
[2025-06-03 17:09:23] 2025-06-03 21:09:03,310 | INFO     | sizes: {0: 2405184, 6: 2405390, 11: 2405418, 6095: 2432046, 6097: 2441043, 6104: 2441157}
[2025-06-03 17:09:23] 2025-06-03 21:09:03,310 | INFO     | --------------------------------------------------
[2025-06-03 17:09:23] 2025-06-03 21:09:03,310 | INFO     | 
[2025-06-03 17:09:23] 2025-06-03 21:09:03,311 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 17:09:23] 2025-06-03 21:09:03,337 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,338 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,338 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,338 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,339 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,339 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,339 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,339 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,341 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:09:23] 2025-06-03 21:09:03,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,341 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:09:23] 2025-06-03 21:09:03,342 | INFO     | job 6677783153 has completed (purged errors)
[2025-06-03 17:09:23] 2025-06-03 21:09:03,342 | INFO     | overall cleanup function is called
[2025-06-03 17:09:23] 2025-06-03 21:09:04,350 | INFO     | --- collectZombieJob: --- 10, [2786]
[2025-06-03 17:09:23] 2025-06-03 21:09:04,351 | INFO     | zombie collector waiting for pid 2786
[2025-06-03 17:09:23] 2025-06-03 21:09:04,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:09:23] 2025-06-03 21:09:04,351 | INFO     | collected zombie processes
[2025-06-03 17:09:23] 2025-06-03 21:09:04,351 | INFO     | will attempt to kill all subprocesses of pid=2786
[2025-06-03 17:09:23] 2025-06-03 21:09:04,446 | INFO     | process IDs to be killed: [2786] (in reverse order)
[2025-06-03 17:09:23] 2025-06-03 21:09:04,508 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:09:23] 2025-06-03 21:09:04,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:09:23] 2025-06-03 21:09:04,512 | INFO     | did not find any defunct processes belonging to 2786
[2025-06-03 17:09:23] 2025-06-03 21:09:04,516 | INFO     | did not find any defunct processes belonging to 2786
[2025-06-03 17:09:23] 2025-06-03 21:09:04,516 | INFO     | ready for new job
[2025-06-03 17:09:23] 2025-06-03 21:09:04,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:09:23] 2025-06-03 21:09:04,518 | INFO     | **************************************
[2025-06-03 17:09:23] 2025-06-03 21:09:04,518 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:09:23] 2025-06-03 21:09:04,518 | INFO     | **************************************
[2025-06-03 17:09:23] 2025-06-03 21:09:04,518 | INFO     | 
[2025-06-03 17:09:23] 2025-06-03 21:09:04,519 | INFO     | architecture information:
[2025-06-03 17:09:23] 2025-06-03 21:09:04,519 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:09:23] 2025-06-03 21:09:04,536 | INFO     | cat /etc/os-release:
[2025-06-03 17:09:23] NAME="CentOS Linux"
[2025-06-03 17:09:23] VERSION="7 (Core)"
[2025-06-03 17:09:23] ID="centos"
[2025-06-03 17:09:23] ID_LIKE="rhel fedora"
[2025-06-03 17:09:23] VERSION_ID="7"
[2025-06-03 17:09:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:09:23] ANSI_COLOR="0;31"
[2025-06-03 17:09:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:09:23] HOME_URL="https://www.centos.org/"
[2025-06-03 17:09:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:09:23] 
[2025-06-03 17:09:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:09:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:09:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:09:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:09:23] 
[2025-06-03 17:09:23] 2025-06-03 21:09:04,536 | INFO     | **************************************
[2025-06-03 17:09:23] 2025-06-03 21:09:05,039 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 17:09:23] 2025-06-03 21:09:05,060 | INFO     | sufficient remaining disk space (18641584128 B)
[2025-06-03 17:09:23] 2025-06-03 21:09:05,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:09:23] 2025-06-03 21:09:05,060 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:09:23] 2025-06-03 21:09:05,061 | INFO     | update_server=False
[2025-06-03 17:09:23] 2025-06-03 21:09:05,061 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:09:23] 2025-06-03 21:09:05,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:09:23] 2025-06-03 21:09:05,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:09:23] 2025-06-03 21:09:05,205 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:09:23] 2025-06-03 21:09:05,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:09:23] 2025-06-03 21:09:05,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:09:23] 2025-06-03 21:09:05,391 | INFO     | all data control threads have been joined
[2025-06-03 17:09:23] 2025-06-03 21:09:05,930 | INFO     | all payload control threads have been joined
[2025-06-03 17:09:23] 2025-06-03 21:09:05,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:09:23] 2025-06-03 21:09:05,958 | INFO     | aborting loop
[2025-06-03 17:09:23] 2025-06-03 21:09:06,067 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:06,067 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:06,130 | INFO     | all job control threads have been joined
[2025-06-03 17:09:23] 2025-06-03 21:09:06,229 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:06,382 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:06,399 | INFO     | [data] control thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:06,693 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:09:23] 2025-06-03 21:09:06,759 | INFO     | [job] validate thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:06,781 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:06,811 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:06,936 | INFO     | [payload] control thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:06,964 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:07,063 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:07,136 | INFO     | [job] control thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:07,146 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:07,155 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:10,695 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:15,653 | INFO     | job.realtimelogging is not enabled
[2025-06-03 17:09:23] 2025-06-03 21:09:16,659 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:09:23] 2025-06-03 21:09:17,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139991859865408)>', '<ExcThread(monitor, started 139991279716096)>']
[2025-06-03 17:09:23] 2025-06-03 21:09:18,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:09:23] 2025-06-03 21:09:18,263 | INFO     | [monitor] control thread has ended
[2025-06-03 17:09:23] 2025-06-03 21:09:22,646 | INFO     | all workflow threads have been joined
[2025-06-03 17:09:23] 2025-06-03 21:09:22,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:09:23] 2025-06-03 21:09:22,648 | INFO     | traces error code: 0
[2025-06-03 17:09:23] 2025-06-03 21:09:22,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:09:23] 2025-06-03 21:09:22,776 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:09:23] 2025-06-03 21:09:22,781 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:09:23] 2025-06-03 21:09:22,785 [wrapper] pilotpid: 28625
[2025-06-03 17:09:23] 2025-06-03 21:09:22,789 [wrapper] Pilot exit status: 0
[2025-06-03 17:09:23] 2025-06-03 21:09:22,809 [wrapper] pandaids: 6677783153
[2025-06-03 17:09:23] 2025-06-03 21:09:22,851 [wrapper] cleanup supervisor_pilot 22569 28626
[2025-06-03 17:09:23] 2025-06-03 21:09:22,856 [wrapper] Test setup, not cleaning
[2025-06-03 17:09:23] 2025-06-03 21:09:22,861 [wrapper] apfmon messages muted
[2025-06-03 17:09:23] 2025-06-03 21:09:22,865 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:09:23] 2025-06-03 21:09:22,869 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:09:23]  *** Error codes and diagnostics ***
[2025-06-03 17:09:23]     "exeErrorCode": 0,
[2025-06-03 17:09:23]     "exeErrorDiag": "",
[2025-06-03 17:09:23]     "pilotErrorCode": 0,
[2025-06-03 17:09:23]     "pilotErrorDiag": "",
[2025-06-03 17:09:23]  *** Listing of results directory ***
[2025-06-03 17:09:23] total 393152
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 12:42 pilot3.tar.gz
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 12:45 queuedata.json
[2025-06-03 17:09:23] -rwx------ 1 boincer umatlas     37140 Jun  3 12:46 runpilot2-wrapper.sh
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas       100 Jun  3 15:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:09:23] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 15:26 run_atlas
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas       105 Jun  3 15:26 job.xml
[2025-06-03 17:09:23] -rw-r--r-- 2 boincer umatlas 215467956 Jun  3 15:26 EVNT.45006593._001569.pool.root.1
[2025-06-03 17:09:23] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 15:26 start_atlas.sh
[2025-06-03 17:09:23] drwxrwx--x 2 boincer umatlas      4096 Jun  3 15:26 shared
[2025-06-03 17:09:23] -rw-r--r-- 2 boincer umatlas    508888 Jun  3 15:26 input.tar.gz
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas         0 Jun  3 15:26 boinc_lockfile
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 15:26 pandaJob.out
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas    986893 Jun  3 15:26 agis_schedconf.cvmfs.json
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas   1603667 Jun  3 15:27 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:09:23] drwx------ 4 boincer umatlas      4096 Jun  3 15:27 pilot3
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas        95 Jun  3 17:08 pilot_heartbeat.json
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas 181523941 Jun  3 17:08 HITS.45006595._039117.pool.root.1
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas       530 Jun  3 17:08 boinc_task_state.xml
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas      1049 Jun  3 17:08 memory_monitor_summary.json
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas    311923 Jun  3 17:08 log.45006595._039117.job.log.tgz.1
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas      7744 Jun  3 17:09 heartbeat.json
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas      5825 Jun  3 17:09 init_data.xml
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas        27 Jun  3 17:09 wrapper_checkpoint.txt
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 17:09 boinc_mmap_file
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas      4425 Jun  3 17:09 pilotlog.txt
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas    568892 Jun  3 17:09 log.45006595._039117.job.log.1
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas       357 Jun  3 17:09 output.list
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas       620 Jun  3 17:09 runtime_log
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas    901120 Jun  3 17:09 result.tar.gz
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas       658 Jun  3 17:09 xZANDmPxjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZ8kKDmNfG9Jo.diag
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 17:09 runtime_log.err
[2025-06-03 17:09:23] -rw-r--r-- 1 boincer umatlas     20622 Jun  3 17:09 stderr.txt
[2025-06-03 17:09:23] HITS file was successfully produced:
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas 181523941 Jun  3 17:08 shared/HITS.pool.root.1
[2025-06-03 17:09:23]  *** Contents of shared directory: ***
[2025-06-03 17:09:23] total 389092
[2025-06-03 17:09:23] -rw-r--r-- 2 boincer umatlas 215467956 Jun  3 15:26 ATLAS.root_0
[2025-06-03 17:09:23] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 15:26 start_atlas.sh
[2025-06-03 17:09:23] -rw-r--r-- 2 boincer umatlas    508888 Jun  3 15:26 input.tar.gz
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas 181523941 Jun  3 17:08 HITS.pool.root.1
[2025-06-03 17:09:23] -rw------- 1 boincer umatlas    901120 Jun  3 17:09 result.tar.gz
17:09:24 (25029): run_atlas exited; CPU time 45169.631953
17:09:24 (25029): called boinc_finish(0)

</stderr_txt>
]]>

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