Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:27:40 (18386): wrapper (7.7.26015): starting
05:27:40 (18386): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:27:40] Arguments: --nthreads 8
[2025-06-04 05:27:40] Threads: 8
[2025-06-04 05:27:40] Checking for CVMFS
[2025-06-04 05:27:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:27:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:27:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:27:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:27:44] 2.11.2.0 26121 32667 91120 146766 1 64 21044759 25165824 4293 130560 0 16077224 99.794 19248737 2060 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 05:27:44] CVMFS is ok
[2025-06-04 05:27:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:27:44] Checking for apptainer binary...
[2025-06-04 05:27:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:27:44] Running /usr/bin/apptainer --version
[2025-06-04 05:27:44] apptainer version 1.3.2-1.el7
[2025-06-04 05:27:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:33:08] cg-vwn308.simple-grid.lan
[2025-06-04 05:33:08] apptainer works
[2025-06-04 05:33:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:33:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:33:08] Starting ATLAS job with PandaID=6677783108
[2025-06-04 05:33:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:39:11]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:39:11] 2025-06-04 07:28:21,825 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:39:11] 2025-06-04 07:28:21,826 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:39:11] 2025-06-04 07:28:21,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:39:11] 2025-06-04 07:28:21,835 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:39:11] 2025-06-04 07:28:21,835 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,837 | INFO     | sum of deviations: 76575300189.99998
[2025-06-04 09:39:11] 2025-06-04 07:28:21,837 | INFO     | mean x: 1749015315.5
[2025-06-04 09:39:11] 2025-06-04 07:28:21,838 | INFO     | mean y: 2428162.4272727272
[2025-06-04 09:39:11] 2025-06-04 07:28:21,838 | INFO     | -- intersect: -40561950406.4297
[2025-06-04 09:39:11] 2025-06-04 07:28:21,838 | INFO     | intersect: -40561950406.4297
[2025-06-04 09:39:11] 2025-06-04 07:28:21,838 | INFO     | chi2: 5.91529708331578
[2025-06-04 09:39:11] 2025-06-04 07:28:21,839 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,843 | INFO     | sum of deviations: 89212867403.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,843 | INFO     | mean x: 1749015163.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,843 | INFO     | mean y: 2436735.6139534884
[2025-06-04 09:39:11] 2025-06-04 07:28:21,843 | INFO     | -- intersect: -50630913545.920364
[2025-06-04 09:39:11] 2025-06-04 07:28:21,844 | INFO     | intersect: -50630913545.920364
[2025-06-04 09:39:11] 2025-06-04 07:28:21,844 | INFO     | chi2: 5.189812903568621
[2025-06-04 09:39:11] 2025-06-04 07:28:21,844 | INFO     | current chi2=5.189812903568621 (change=12.264543429161023 %)
[2025-06-04 09:39:11] 2025-06-04 07:28:21,844 | INFO     | right removable region: 214
[2025-06-04 09:39:11] 2025-06-04 07:28:21,845 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,849 | INFO     | sum of deviations: 4062598474.999996
[2025-06-04 09:39:11] 2025-06-04 07:28:21,849 | INFO     | mean x: 1749015468.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,849 | INFO     | mean y: 2478352.7395348838
[2025-06-04 09:39:11] 2025-06-04 07:28:21,849 | INFO     | -- intersect: -2303276562.411428
[2025-06-04 09:39:11] 2025-06-04 07:28:21,850 | INFO     | intersect: -2303276562.411428
[2025-06-04 09:39:11] 2025-06-04 07:28:21,850 | INFO     | chi2: 1.5667605559227602
[2025-06-04 09:39:11] 2025-06-04 07:28:21,853 | INFO     | current chi2=1.5667605559227602 (change=73.51340881353462 %)
[2025-06-04 09:39:11] 2025-06-04 07:28:21,854 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 09:39:11] 2025-06-04 07:28:21,856 | INFO     | sum of deviations: -22596233660.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,856 | INFO     | mean x: 1749015620.5
[2025-06-04 09:39:11] 2025-06-04 07:28:21,856 | INFO     | mean y: 2497573.980952381
[2025-06-04 09:39:11] 2025-06-04 07:28:21,856 | INFO     | -- intersect: 13765186224.172106
[2025-06-04 09:39:11] 2025-06-04 07:28:21,857 | INFO     | intersect: 13765186224.172106
[2025-06-04 09:39:11] 2025-06-04 07:28:21,857 | INFO     | chi2: 0.8229227483253289
[2025-06-04 09:39:11] 2025-06-04 07:28:21,857 | INFO     | current chi2=0.8229227483253289 (change=47.47616378172989 %)
[2025-06-04 09:39:11] 2025-06-04 07:28:21,858 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,862 | INFO     | sum of deviations: -24826205109.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,863 | INFO     | mean x: 1749015773.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,863 | INFO     | mean y: 2499241.2146341465
[2025-06-04 09:39:11] 2025-06-04 07:28:21,863 | INFO     | -- intersect: 16257028341.886461
[2025-06-04 09:39:11] 2025-06-04 07:28:21,863 | INFO     | intersect: 16257028341.886461
[2025-06-04 09:39:11] 2025-06-04 07:28:21,864 | INFO     | chi2: 0.8032989536536479
[2025-06-04 09:39:11] 2025-06-04 07:28:21,864 | INFO     | current chi2=0.8032989536536479 (change=2.384646032888985 %)
[2025-06-04 09:39:11] 2025-06-04 07:28:21,864 | INFO     | left removable region: 30
[2025-06-04 09:39:11] 2025-06-04 07:28:21,864 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,866 | INFO     | sum of deviations: -8481670580.0
[2025-06-04 09:39:11] 2025-06-04 07:28:21,866 | INFO     | mean x: 1749016047.5
[2025-06-04 09:39:11] 2025-06-04 07:28:21,869 | INFO     | mean y: 2508213.9565217393
[2025-06-04 09:39:11] 2025-06-04 07:28:21,870 | INFO     | -- intersect: 7682418202.5549
[2025-06-04 09:39:11] 2025-06-04 07:28:21,870 | INFO     | intersect: 7682418202.5549
[2025-06-04 09:39:11] 2025-06-04 07:28:21,870 | INFO     | chi2: 0.012783568628256255
[2025-06-04 09:39:11] 2025-06-04 07:28:21,871 | INFO     | -- intersect: 7682418202.5549
[2025-06-04 09:39:11] 2025-06-04 07:28:21,871 | INFO     | current memory leak: -4.39 B/s (using 184 data points, chi2=0.01)
[2025-06-04 09:39:11] 2025-06-04 07:28:21,872 | INFO     | ..............................
[2025-06-04 09:39:11] 2025-06-04 07:28:21,872 | INFO     | . Timing measurements:
[2025-06-04 09:39:11] 2025-06-04 07:28:21,872 | INFO     | . get job = 0 s
[2025-06-04 09:39:11] 2025-06-04 07:28:21,872 | INFO     | . initial setup = 8 s
[2025-06-04 09:39:11] 2025-06-04 07:28:21,872 | INFO     | . payload setup = 141 s
[2025-06-04 09:39:11] 2025-06-04 07:28:21,872 | INFO     | . stage-in = 0 s
[2025-06-04 09:39:11] 2025-06-04 07:28:21,872 | INFO     | . payload execution = 13517 s
[2025-06-04 09:39:11] 2025-06-04 07:28:21,873 | INFO     | . stage-out = 2 s
[2025-06-04 09:39:11] 2025-06-04 07:28:21,873 | INFO     | . log creation = 0 s
[2025-06-04 09:39:11] 2025-06-04 07:28:21,873 | INFO     | ..............................
[2025-06-04 09:39:11] 2025-06-04 07:28:22,018 | INFO     | 
[2025-06-04 09:39:11] 2025-06-04 07:28:22,018 | INFO     | job summary report
[2025-06-04 09:39:11] 2025-06-04 07:28:22,018 | INFO     | --------------------------------------------------
[2025-06-04 09:39:11] 2025-06-04 07:28:22,018 | INFO     | PanDA job id: 6677783108
[2025-06-04 09:39:11] 2025-06-04 07:28:22,018 | INFO     | task id: 45006595
[2025-06-04 09:39:11] 2025-06-04 07:28:22,018 | INFO     | errors: (none)
[2025-06-04 09:39:11] 2025-06-04 07:28:22,018 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:39:11] 2025-06-04 07:28:22,018 | INFO     | pilot state: finished 
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | transexitcode: 0
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | exeerrorcode: 0
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | exeerrordiag: 
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | exitcode: 0
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | exitmsg: OK
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | cpuconsumptiontime: 48956 s
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | nevents: 400
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | neventsw: 0
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | pid: 4667
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | pgrp: 4667
[2025-06-04 09:39:11] 2025-06-04 07:28:22,019 | INFO     | corecount: 8
[2025-06-04 09:39:11] 2025-06-04 07:28:22,020 | INFO     | event service: False
[2025-06-04 09:39:11] 2025-06-04 07:28:22,020 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 13: 2405240, 24: 2405296, 34: 2405324, 45: 2405480, 56: 2405508, 66: 2405536, 77: 2405564, 87: 2405826, 88: 2406134, 13
[2025-06-04 09:39:11] 2025-06-04 07:28:22,020 | INFO     | --------------------------------------------------
[2025-06-04 09:39:11] 2025-06-04 07:28:22,020 | INFO     | 
[2025-06-04 09:39:11] 2025-06-04 07:28:22,020 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 09:39:11] 2025-06-04 07:28:22,405 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,405 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,405 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,405 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,407 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:39:11] 2025-06-04 07:28:22,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,407 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:39:11] 2025-06-04 07:28:22,407 | INFO     | job 6677783108 has completed (purged errors)
[2025-06-04 09:39:11] 2025-06-04 07:28:22,407 | INFO     | overall cleanup function is called
[2025-06-04 09:39:11] 2025-06-04 07:28:23,417 | INFO     | --- collectZombieJob: --- 10, [4667]
[2025-06-04 09:39:11] 2025-06-04 07:28:23,418 | INFO     | zombie collector waiting for pid 4667
[2025-06-04 09:39:11] 2025-06-04 07:28:23,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:39:11] 2025-06-04 07:28:23,418 | INFO     | collected zombie processes
[2025-06-04 09:39:11] 2025-06-04 07:28:23,418 | INFO     | will attempt to kill all subprocesses of pid=4667
[2025-06-04 09:39:11] 2025-06-04 07:28:23,586 | INFO     | process IDs to be killed: [4667] (in reverse order)
[2025-06-04 09:39:11] 2025-06-04 07:28:24,476 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:39:11] 2025-06-04 07:28:24,476 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:39:11] 2025-06-04 07:28:24,480 | INFO     | did not find any defunct processes belonging to 4667
[2025-06-04 09:39:11] 2025-06-04 07:28:24,483 | INFO     | did not find any defunct processes belonging to 4667
[2025-06-04 09:39:11] 2025-06-04 07:28:24,484 | INFO     | ready for new job
[2025-06-04 09:39:11] 2025-06-04 07:28:24,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:39:11] 2025-06-04 07:28:24,486 | INFO     | **************************************
[2025-06-04 09:39:11] 2025-06-04 07:28:24,486 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:39:11] 2025-06-04 07:28:24,487 | INFO     | **************************************
[2025-06-04 09:39:11] 2025-06-04 07:28:24,487 | INFO     | 
[2025-06-04 09:39:11] 2025-06-04 07:28:24,487 | INFO     | pilot is running in a VM
[2025-06-04 09:39:11] 2025-06-04 07:28:24,487 | INFO     | architecture information:
[2025-06-04 09:39:11] 2025-06-04 07:28:24,494 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:39:11] 2025-06-04 07:28:24,596 | INFO     | cat /etc/os-release:
[2025-06-04 09:39:11] NAME="CentOS Linux"
[2025-06-04 09:39:11] VERSION="7 (Core)"
[2025-06-04 09:39:11] ID="centos"
[2025-06-04 09:39:11] ID_LIKE="rhel fedora"
[2025-06-04 09:39:11] VERSION_ID="7"
[2025-06-04 09:39:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:39:11] ANSI_COLOR="0;31"
[2025-06-04 09:39:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:39:11] HOME_URL="https://www.centos.org/"
[2025-06-04 09:39:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:39:11] 
[2025-06-04 09:39:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:39:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:39:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:39:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:39:11] 
[2025-06-04 09:39:11] 2025-06-04 07:28:24,597 | INFO     | **************************************
[2025-06-04 09:39:11] 2025-06-04 07:28:25,101 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 09:39:11] 2025-06-04 07:28:25,342 | INFO     | sufficient remaining disk space (496579379200 B)
[2025-06-04 09:39:11] 2025-06-04 07:28:25,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:39:11] 2025-06-04 07:28:25,343 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:39:11] 2025-06-04 07:28:25,343 | INFO     | update_server=False
[2025-06-04 09:39:11] 2025-06-04 07:28:25,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:39:11] 2025-06-04 07:28:25,344 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 09:39:11] 2025-06-04 07:28:25,345 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:39:11] 2025-06-04 07:28:25,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:39:11] 2025-06-04 07:28:25,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:39:11] 2025-06-04 07:28:25,479 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 09:39:11] 2025-06-04 07:28:25,480 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 09:39:11] 2025-06-04 07:28:25,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:39:11] 2025-06-04 07:28:25,480 | INFO     | will abort loop
[2025-06-04 09:39:11] 2025-06-04 07:28:25,514 | INFO     | all data control threads have been joined
[2025-06-04 09:39:11] 2025-06-04 07:28:26,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:39:11] 2025-06-04 07:28:26,103 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:39:11] 2025-06-04 07:28:26,280 | INFO     | all job control threads have been joined
[2025-06-04 09:39:11] 2025-06-04 07:28:26,349 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:26,398 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:26,486 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:26,520 | INFO     | [data] control thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:26,603 | INFO     | all payload control threads have been joined
[2025-06-04 09:39:11] 2025-06-04 07:28:26,746 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:26,906 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:27,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:39:11] 2025-06-04 07:28:27,286 | INFO     | [job] control thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:27,319 | INFO     | [job] validate thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:27,363 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:27,447 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:27,491 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:27,609 | INFO     | [payload] control thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:27,719 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:28,034 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:28,039 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:30,112 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:39:11] 2025-06-04 07:28:30,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552091080512)>', '<ExcThread(monitor, started 140551647123200)>']
[2025-06-04 09:39:11] 2025-06-04 07:28:30,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:39:11] 2025-06-04 07:28:30,376 | INFO     | [monitor] control thread has ended
[2025-06-04 09:39:11] 2025-06-04 07:28:35,185 | INFO     | all workflow threads have been joined
[2025-06-04 09:39:11] 2025-06-04 07:28:35,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:39:11] 2025-06-04 07:28:35,186 | INFO     | traces error code: 0
[2025-06-04 09:39:11] 2025-06-04 07:28:35,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:39:11] 2025-06-04 07:28:35,518 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:39:11] 2025-06-04 07:28:35,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:39:11] 2025-06-04 07:28:35,711 [wrapper] pilotpid: 28421
[2025-06-04 09:39:11] 2025-06-04 07:28:35,807 [wrapper] Pilot exit status: 0
[2025-06-04 09:39:11] 2025-06-04 07:28:36,244 [wrapper] pandaids: 6677783108
[2025-06-04 09:39:11] 2025-06-04 07:28:37,116 [wrapper] cleanup supervisor_pilot  3961 28422
[2025-06-04 09:39:11] 2025-06-04 07:28:37,226 [wrapper] Test setup, not cleaning
[2025-06-04 09:39:11] 2025-06-04 07:28:37,334 [wrapper] apfmon messages muted
[2025-06-04 09:39:11] 2025-06-04 07:28:37,441 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:39:11] 2025-06-04 07:28:37,581 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:39:11]  *** Error codes and diagnostics ***
[2025-06-04 09:39:11]     "exeErrorCode": 0,
[2025-06-04 09:39:11]     "exeErrorDiag": "",
[2025-06-04 09:39:11]     "pilotErrorCode": 0,
[2025-06-04 09:39:11]     "pilotErrorDiag": "",
[2025-06-04 09:39:11]  *** Listing of results directory ***
[2025-06-04 09:39:11] total 393084
[2025-06-04 09:39:11] -rwx------. 1 boinc boinc     37140 Jun  3 18:42 runpilot2-wrapper.sh
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc      5111 Jun  3 18:42 queuedata.json
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc       100 Jun  4 05:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:39:11] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 05:27 run_atlas
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc       105 Jun  4 05:27 job.xml
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc      6391 Jun  4 05:27 init_data.xml
[2025-06-04 09:39:11] -rw-r--r--. 2 boinc boinc 216968742 Jun  4 05:27 EVNT.45006593._001567.pool.root.1
[2025-06-04 09:39:11] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:27 start_atlas.sh
[2025-06-04 09:39:11] drwxrwx--x. 2 boinc boinc        68 Jun  4 05:27 shared
[2025-06-04 09:39:11] -rw-r--r--. 2 boinc boinc    508875 Jun  4 05:27 input.tar.gz
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc         0 Jun  4 05:27 boinc_lockfile
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc      2525 Jun  4 05:33 pandaJob.out
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc    986077 Jun  4 05:36 agis_schedconf.cvmfs.json
[2025-06-04 09:39:11] drwx------. 4 boinc boinc      4096 Jun  4 05:36 pilot3
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc 178579791 Jun  4 09:25 HITS.45006595._039072.pool.root.1
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc       531 Jun  4 09:25 boinc_task_state.xml
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc      1018 Jun  4 09:26 memory_monitor_summary.json
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc   1603667 Jun  4 09:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc    384993 Jun  4 09:26 log.45006595._039072.job.log.tgz.1
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc        95 Jun  4 09:27 pilot_heartbeat.json
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc      7695 Jun  4 09:28 heartbeat.json
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc      4725 Jun  4 09:28 pilotlog.txt
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc   1189942 Jun  4 09:28 log.45006595._039072.job.log.1
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc       357 Jun  4 09:28 output.list
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc       620 Jun  4 09:28 runtime_log
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc   1597440 Jun  4 09:28 result.tar.gz
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc      8659 Jun  4 09:28 runtime_log.err
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc       657 Jun  4 09:28 26WNDmUtjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXIZKDm62rUsn.diag
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc      8192 Jun  4 09:39 boinc_mmap_file
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc        28 Jun  4 09:39 wrapper_checkpoint.txt
[2025-06-04 09:39:11] -rw-r--r--. 1 boinc boinc     20512 Jun  4 09:39 stderr.txt
[2025-06-04 09:39:11] HITS file was successfully produced:
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc 178579791 Jun  4 09:25 shared/HITS.pool.root.1
[2025-06-04 09:39:11]  *** Contents of shared directory: ***
[2025-06-04 09:39:11] total 388356
[2025-06-04 09:39:11] -rw-r--r--. 2 boinc boinc 216968742 Jun  4 05:27 ATLAS.root_0
[2025-06-04 09:39:11] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:27 start_atlas.sh
[2025-06-04 09:39:11] -rw-r--r--. 2 boinc boinc    508875 Jun  4 05:27 input.tar.gz
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc 178579791 Jun  4 09:25 HITS.pool.root.1
[2025-06-04 09:39:11] -rw-------. 1 boinc boinc   1597440 Jun  4 09:28 result.tar.gz
09:39:13 (18386): run_atlas exited; CPU time 49147.751175
09:39:13 (18386): called boinc_finish(0)

</stderr_txt>
]]>

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