Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:40:20 (4002744): wrapper (7.7.26015): starting
15:40:20 (4002744): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 15:40:20] Arguments: --nthreads 4
[2025-06-05 15:40:20] Threads: 4
[2025-06-05 15:40:20] Checking for CVMFS
[2025-06-05 15:40:20] No cvmfs_config command found, will try listing directly
[2025-06-05 15:40:20] CVMFS is ok
[2025-06-05 15:40:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 15:40:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 15:40:20] Further information can be found at the LHC@home message board.
[2025-06-05 15:40:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:40:20] Checking for apptainer binary...
[2025-06-05 15:40:20] which: no apptainer in ((null))
[2025-06-05 15:40:20] apptainer is not installed, using version from CVMFS
[2025-06-05 15:40:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:40:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-06-05 15:40:20] apptainer works
[2025-06-05 15:40:20] Set ATHENA_PROC_NUMBER=4
[2025-06-05 15:40:20] Set ATHENA_CORE_NUMBER=4
[2025-06-05 15:40:20] Starting ATLAS job with PandaID=6677783211
[2025-06-05 15:40:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:46:21]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:46:21] 2025-06-05 15:44:03,267 | INFO     | total number of processed events: 400 (read)
[2025-06-05 17:46:21] 2025-06-05 15:44:03,276 | INFO     | executing command: lscpu
[2025-06-05 17:46:21] 2025-06-05 15:44:03,393 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 17:46:21] 2025-06-05 15:44:05,685 | INFO     | monitor loop #517: job 0:6677783211 is in state 'finished'
[2025-06-05 17:46:21] 2025-06-05 15:44:05,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:46:21] 2025-06-05 15:44:08,189 | INFO     | monitor loop #518: job 0:6677783211 is in state 'finished'
[2025-06-05 17:46:21] 2025-06-05 15:44:08,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:46:21] 2025-06-05 15:44:09,105 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 17:46:21] 2025-06-05 15:44:09,105 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6677783211/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:46:21] 2025-06-05 15:44:09,106 | INFO     | extracted standard info from prmon json
[2025-06-05 17:46:21] 2025-06-05 15:44:09,106 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:46:21] 2025-06-05 15:44:09,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:46:21] 2025-06-05 15:44:09,107 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:46:21] 2025-06-05 15:44:09,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:46:21] 2025-06-05 15:44:09,109 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:46:21] 2025-06-05 15:44:09,109 | INFO     | sum of square deviations: 549294020.0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,110 | INFO     | sum of deviations: 14918301336.999996
[2025-06-05 17:46:21] 2025-06-05 15:44:09,110 | INFO     | mean x: 1749134527.0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,110 | INFO     | mean y: 2292449.52892562
[2025-06-05 17:46:21] 2025-06-05 15:44:09,110 | INFO     | -- intersect: -47502531929.8389
[2025-06-05 17:46:21] 2025-06-05 15:44:09,110 | INFO     | intersect: -47502531929.8389
[2025-06-05 17:46:21] 2025-06-05 15:44:09,110 | INFO     | chi2: 1.6345310258175256
[2025-06-05 17:46:21] 2025-06-05 15:44:09,111 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,111 | INFO     | sum of deviations: 14297611208.999998
[2025-06-05 17:46:21] 2025-06-05 15:44:09,111 | INFO     | mean x: 1749134374.5
[2025-06-05 17:46:21] 2025-06-05 15:44:09,111 | INFO     | mean y: 2290999.6896551726
[2025-06-05 17:46:21] 2025-06-05 15:44:09,111 | INFO     | -- intersect: -51671050050.6179
[2025-06-05 17:46:21] 2025-06-05 15:44:09,111 | INFO     | intersect: -51671050050.6179
[2025-06-05 17:46:21] 2025-06-05 15:44:09,112 | INFO     | chi2: 1.6374796223968842
[2025-06-05 17:46:21] 2025-06-05 15:44:09,112 | INFO     | current chi2=1.6374796223968842 (change=-0.180394041641624 %)
[2025-06-05 17:46:21] 2025-06-05 15:44:09,112 | INFO     | right removable region: 115
[2025-06-05 17:46:21] 2025-06-05 15:44:09,112 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,112 | INFO     | sum of deviations: -3626077900.0000005
[2025-06-05 17:46:21] 2025-06-05 15:44:09,113 | INFO     | mean x: 1749134679.5
[2025-06-05 17:46:21] 2025-06-05 15:44:09,113 | INFO     | mean y: 2334983.775862069
[2025-06-05 17:46:21] 2025-06-05 15:44:09,113 | INFO     | -- intersect: 13107432746.966154
[2025-06-05 17:46:21] 2025-06-05 15:44:09,113 | INFO     | intersect: 13107432746.966154
[2025-06-05 17:46:21] 2025-06-05 15:44:09,113 | INFO     | chi2: 0.008403740418099626
[2025-06-05 17:46:21] 2025-06-05 15:44:09,113 | INFO     | current chi2=0.008403740418099626 (change=99.48586228799809 %)
[2025-06-05 17:46:21] 2025-06-05 15:44:09,113 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,114 | INFO     | sum of deviations: -3085935831.9999995
[2025-06-05 17:46:21] 2025-06-05 15:44:09,114 | INFO     | mean x: 1749134832.0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,114 | INFO     | mean y: 2333603.3153153155
[2025-06-05 17:46:21] 2025-06-05 15:44:09,114 | INFO     | -- intersect: 12731444467.516901
[2025-06-05 17:46:21] 2025-06-05 15:44:09,114 | INFO     | intersect: 12731444467.516901
[2025-06-05 17:46:21] 2025-06-05 15:44:09,114 | INFO     | chi2: 0.0083295699652723
[2025-06-05 17:46:21] 2025-06-05 15:44:09,114 | INFO     | current chi2=0.0083295699652723 (change=0.8825885752917938 %)
[2025-06-05 17:46:21] 2025-06-05 15:44:09,114 | INFO     | left removable region: 20
[2025-06-05 17:46:21] 2025-06-05 15:44:09,115 | INFO     | sum of square deviations: 265828240.0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,115 | INFO     | sum of deviations: -1249927941.9999995
[2025-06-05 17:46:21] 2025-06-05 15:44:09,115 | INFO     | mean x: 1749134954.0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,115 | INFO     | mean y: 2328485.852631579
[2025-06-05 17:46:21] 2025-06-05 15:44:09,115 | INFO     | -- intersect: 8226784447.84329
[2025-06-05 17:46:21] 2025-06-05 15:44:09,115 | INFO     | intersect: 8226784447.84329
[2025-06-05 17:46:21] 2025-06-05 15:44:09,116 | INFO     | chi2: 0.005712177897849872
[2025-06-05 17:46:21] 2025-06-05 15:44:09,116 | INFO     | -- intersect: 8226784447.84329
[2025-06-05 17:46:21] 2025-06-05 15:44:09,116 | INFO     | current memory leak: -4.70 B/s (using 95 data points, chi2=0.01)
[2025-06-05 17:46:21] 2025-06-05 15:44:09,116 | INFO     | ..............................
[2025-06-05 17:46:21] 2025-06-05 15:44:09,116 | INFO     | . Timing measurements:
[2025-06-05 17:46:21] 2025-06-05 15:44:09,116 | INFO     | . get job = 0 s
[2025-06-05 17:46:21] 2025-06-05 15:44:09,117 | INFO     | . initial setup = 1 s
[2025-06-05 17:46:21] 2025-06-05 15:44:09,117 | INFO     | . payload setup = 9 s
[2025-06-05 17:46:21] 2025-06-05 15:44:09,117 | INFO     | . stage-in = 0 s
[2025-06-05 17:46:21] 2025-06-05 15:44:09,117 | INFO     | . payload execution = 7371 s
[2025-06-05 17:46:21] 2025-06-05 15:44:09,117 | INFO     | . stage-out = 0 s
[2025-06-05 17:46:21] 2025-06-05 15:44:09,117 | INFO     | . log creation = 0 s
[2025-06-05 17:46:21] 2025-06-05 15:44:09,117 | INFO     | ..............................
[2025-06-05 17:46:21] 2025-06-05 15:44:09,208 | INFO     | 
[2025-06-05 17:46:21] 2025-06-05 15:44:09,208 | INFO     | job summary report
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | --------------------------------------------------
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | PanDA job id: 6677783211
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | task id: 45006595
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | errors: (none)
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | pilot state: finished 
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | transexitcode: 0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | exeerrorcode: 0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | exeerrordiag: 
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | exitcode: 0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | exitmsg: OK
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | cpuconsumptiontime: 27906 s
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | nevents: 400
[2025-06-05 17:46:21] 2025-06-05 15:44:09,209 | INFO     | neventsw: 0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,210 | INFO     | pid: 4014010
[2025-06-05 17:46:21] 2025-06-05 15:44:09,210 | INFO     | pgrp: 4014010
[2025-06-05 17:46:21] 2025-06-05 15:44:09,210 | INFO     | corecount: 4
[2025-06-05 17:46:21] 2025-06-05 15:44:09,210 | INFO     | event service: False
[2025-06-05 17:46:21] 2025-06-05 15:44:09,210 | INFO     | sizes: {0: 2397303, 7: 2397509, 11: 2397537, 7384: 2425113, 7385: 2425112, 7387: 2434133, 7390: 2434317, 7398: 2434487}
[2025-06-05 17:46:21] 2025-06-05 15:44:09,210 | INFO     | --------------------------------------------------
[2025-06-05 17:46:21] 2025-06-05 15:44:09,210 | INFO     | 
[2025-06-05 17:46:21] 2025-06-05 15:44:09,210 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-06-05 17:46:21] 2025-06-05 15:44:09,239 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,239 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,240 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:46:21] 2025-06-05 15:44:09,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:46:21] 2025-06-05 15:44:09,241 | INFO     | job 6677783211 has completed (purged errors)
[2025-06-05 17:46:21] 2025-06-05 15:44:09,241 | INFO     | overall cleanup function is called
[2025-06-05 17:46:21] 2025-06-05 15:44:10,250 | INFO     | --- collectZombieJob: --- 10, [4014010]
[2025-06-05 17:46:21] 2025-06-05 15:44:10,250 | INFO     | zombie collector waiting for pid 4014010
[2025-06-05 17:46:21] 2025-06-05 15:44:10,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:46:21] 2025-06-05 15:44:10,250 | INFO     | collected zombie processes
[2025-06-05 17:46:21] 2025-06-05 15:44:10,250 | INFO     | will attempt to kill all subprocesses of pid=4014010
[2025-06-05 17:46:21] 2025-06-05 15:44:10,920 | INFO     | process IDs to be killed: [4014010] (in reverse order)
[2025-06-05 17:46:21] 2025-06-05 15:44:11,131 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:46:21] 2025-06-05 15:44:11,132 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:46:21] 2025-06-05 15:44:11,157 | INFO     | did not find any defunct processes belonging to 4014010
[2025-06-05 17:46:21] 2025-06-05 15:44:11,179 | INFO     | did not find any defunct processes belonging to 4014010
[2025-06-05 17:46:21] 2025-06-05 15:44:11,179 | INFO     | ready for new job
[2025-06-05 17:46:21] 2025-06-05 15:44:11,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:46:21] 2025-06-05 15:44:11,181 | INFO     | **************************************
[2025-06-05 17:46:21] 2025-06-05 15:44:11,182 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:46:21] 2025-06-05 15:44:11,182 | INFO     | **************************************
[2025-06-05 17:46:21] 2025-06-05 15:44:11,182 | INFO     | 
[2025-06-05 17:46:21] 2025-06-05 15:44:11,190 | INFO     | architecture information:
[2025-06-05 17:46:21] 2025-06-05 15:44:11,190 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:46:21] 2025-06-05 15:44:11,213 | INFO     | cat /etc/os-release:
[2025-06-05 17:46:21] NAME="CentOS Linux"
[2025-06-05 17:46:21] VERSION="7 (Core)"
[2025-06-05 17:46:21] ID="centos"
[2025-06-05 17:46:21] ID_LIKE="rhel fedora"
[2025-06-05 17:46:21] VERSION_ID="7"
[2025-06-05 17:46:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:46:21] ANSI_COLOR="0;31"
[2025-06-05 17:46:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:46:21] HOME_URL="https://www.centos.org/"
[2025-06-05 17:46:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:46:21] 
[2025-06-05 17:46:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:46:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:46:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:46:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:46:21] 
[2025-06-05 17:46:21] 2025-06-05 15:44:11,213 | INFO     | **************************************
[2025-06-05 17:46:21] 2025-06-05 15:44:11,716 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-06-05 17:46:21] 2025-06-05 15:44:11,735 | INFO     | sufficient remaining disk space (3284879278080 B)
[2025-06-05 17:46:21] 2025-06-05 15:44:11,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:46:21] 2025-06-05 15:44:11,736 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:46:21] 2025-06-05 15:44:11,736 | INFO     | update_server=False
[2025-06-05 17:46:21] 2025-06-05 15:44:11,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:46:21] 2025-06-05 15:44:11,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:46:21] 2025-06-05 15:44:11,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:46:21] 2025-06-05 15:44:11,737 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 17:46:21] 2025-06-05 15:44:11,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:46:21] 2025-06-05 15:44:11,738 | INFO     | aborting loop
[2025-06-05 17:46:21] 2025-06-05 15:44:11,739 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:46:21] 2025-06-05 15:44:11,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:46:21] 2025-06-05 15:44:11,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:46:21] 2025-06-05 15:44:11,936 | INFO     | all data control threads have been joined
[2025-06-05 17:46:21] 2025-06-05 15:44:11,992 | INFO     | all payload control threads have been joined
[2025-06-05 17:46:21] 2025-06-05 15:44:12,241 | INFO     | all job control threads have been joined
[2025-06-05 17:46:21] 2025-06-05 15:44:12,741 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:12,744 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:12,753 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:12,941 | INFO     | [data] control thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:12,997 | INFO     | [payload] control thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:13,246 | INFO     | [job] control thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:13,286 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:13,473 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:13,476 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:13,743 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:13,758 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:13,780 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:14,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:46:21] 2025-06-05 15:44:14,237 | INFO     | [job] validate thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:14,238 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:15,225 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:15,744 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:46:21] 2025-06-05 15:44:17,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22600513238848)>', '<ExcThread(monitor, started 22600273065728)>']
[2025-06-05 17:46:21] 2025-06-05 15:44:17,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:46:21] 2025-06-05 15:44:17,761 | INFO     | [monitor] control thread has ended
[2025-06-05 17:46:21] 2025-06-05 15:44:22,383 | INFO     | all workflow threads have been joined
[2025-06-05 17:46:21] 2025-06-05 15:44:22,383 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:46:21] 2025-06-05 15:44:22,383 | INFO     | traces error code: 0
[2025-06-05 17:46:21] 2025-06-05 15:44:22,384 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:46:21] 2025-06-05 15:44:22,570 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:46:21] 2025-06-05 15:44:22,574 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:46:21] 2025-06-05 15:44:22,578 [wrapper] pilotpid: 4006639
[2025-06-05 17:46:21] 2025-06-05 15:44:22,581 [wrapper] Pilot exit status: 0
[2025-06-05 17:46:21] 2025-06-05 15:44:22,594 [wrapper] pandaids: 6677783211
[2025-06-05 17:46:21] 2025-06-05 15:44:22,724 [wrapper] cleanup supervisor_pilot  216912 4006640
[2025-06-05 17:46:21] 2025-06-05 15:44:22,727 [wrapper] Test setup, not cleaning
[2025-06-05 17:46:21] 2025-06-05 15:44:22,730 [wrapper] apfmon messages muted
[2025-06-05 17:46:21] 2025-06-05 15:44:22,733 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:46:21] 2025-06-05 15:44:22,735 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:46:21]  *** Error codes and diagnostics ***
[2025-06-05 17:46:21]     "exeErrorCode": 0,
[2025-06-05 17:46:21]     "exeErrorDiag": "",
[2025-06-05 17:46:21]     "pilotErrorCode": 0,
[2025-06-05 17:46:21]     "pilotErrorDiag": "",
[2025-06-05 17:46:21]  *** Listing of results directory ***
[2025-06-05 17:46:21] total 386920
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-05 17:46:21] -rwx------ 1 boinc boinc     37140 Jun  3 18:47 runpilot2-wrapper.sh
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc      5111 Jun  3 18:47 queuedata.json
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc       100 Jun  5 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:46:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 15:40 run_atlas
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc       105 Jun  5 15:40 job.xml
[2025-06-05 17:46:21] -rw-r--r-- 2 boinc boinc 216522488 Jun  5 15:40 EVNT.45006593._001571.pool.root.1
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc      6687 Jun  5 15:40 init_data.xml
[2025-06-05 17:46:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 15:40 start_atlas.sh
[2025-06-05 17:46:21] drwxrwx--x 2 boinc boinc      4096 Jun  5 15:40 shared
[2025-06-05 17:46:21] -rw-r--r-- 2 boinc boinc    508876 Jun  5 15:40 input.tar.gz
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc         0 Jun  5 15:40 boinc_lockfile
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc      2524 Jun  5 15:40 pandaJob.out
[2025-06-05 17:46:21] -rw------- 1 boinc boinc    983210 Jun  5 15:40 agis_schedconf.cvmfs.json
[2025-06-05 17:46:21] -rw------- 1 boinc boinc   1598969 Jun  5 15:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:46:21] drwx------ 4 boinc boinc      4096 Jun  5 15:40 pilot3
[2025-06-05 17:46:21] -rw------- 1 boinc boinc 173882906 Jun  5 17:43 HITS.45006595._039175.pool.root.1
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc       529 Jun  5 17:43 boinc_task_state.xml
[2025-06-05 17:46:21] -rw------- 1 boinc boinc      1030 Jun  5 17:43 memory_monitor_summary.json
[2025-06-05 17:46:21] -rw------- 1 boinc boinc        95 Jun  5 17:43 pilot_heartbeat.json
[2025-06-05 17:46:21] -rw------- 1 boinc boinc    279609 Jun  5 17:43 log.45006595._039175.job.log.tgz.1
[2025-06-05 17:46:21] -rw------- 1 boinc boinc      7700 Jun  5 17:44 heartbeat.json
[2025-06-05 17:46:21] -rw------- 1 boinc boinc      4488 Jun  5 17:44 pilotlog.txt
[2025-06-05 17:46:21] -rw------- 1 boinc boinc    708025 Jun  5 17:44 log.45006595._039175.job.log.1
[2025-06-05 17:46:21] -rw------- 1 boinc boinc       357 Jun  5 17:44 output.list
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc       620 Jun  5 17:44 runtime_log
[2025-06-05 17:46:21] -rw------- 1 boinc boinc   1003520 Jun  5 17:44 result.tar.gz
[2025-06-05 17:46:21] -rw------- 1 boinc boinc       662 Jun  5 17:44 uSuLDmKyjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLJZKDmDyOHam.diag
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc      9040 Jun  5 17:44 runtime_log.err
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc        27 Jun  5 17:46 wrapper_checkpoint.txt
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc      8192 Jun  5 17:46 boinc_mmap_file
[2025-06-05 17:46:21] -rw-r--r-- 1 boinc boinc     20939 Jun  5 17:46 stderr.txt
[2025-06-05 17:46:21] HITS file was successfully produced:
[2025-06-05 17:46:21] -rw------- 1 boinc boinc 173882906 Jun  5 17:43 shared/HITS.pool.root.1
[2025-06-05 17:46:21]  *** Contents of shared directory: ***
[2025-06-05 17:46:21] total 382760
[2025-06-05 17:46:21] -rw-r--r-- 2 boinc boinc 216522488 Jun  5 15:40 ATLAS.root_0
[2025-06-05 17:46:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 15:40 start_atlas.sh
[2025-06-05 17:46:21] -rw-r--r-- 2 boinc boinc    508876 Jun  5 15:40 input.tar.gz
[2025-06-05 17:46:21] -rw------- 1 boinc boinc 173882906 Jun  5 17:43 HITS.pool.root.1
[2025-06-05 17:46:21] -rw------- 1 boinc boinc   1003520 Jun  5 17:44 result.tar.gz
17:46:22 (4002744): run_atlas exited; CPU time 28318.766055
17:46:22 (4002744): called boinc_finish(0)

</stderr_txt>
]]>

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