Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:17:52 (6873): wrapper (7.7.26015): starting
05:17:52 (6873): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 05:17:52] Arguments: --nthreads 8
[2025-06-04 05:17:52] Threads: 8
[2025-06-04 05:17:52] Checking for CVMFS
[2025-06-04 05:17:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 05:17:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 05:17:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 05:17:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 05:17:53] 2.11.2.0 7179 32776 89184 146765 3 148 15989283 25165824 4235 130560 0 18029871 99.843 18381068 2467 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 05:17:53] CVMFS is ok
[2025-06-04 05:17:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 05:17:53] Checking for apptainer binary...
[2025-06-04 05:17:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 05:17:53] Running /usr/bin/apptainer --version
[2025-06-04 05:17:53] apptainer version 1.3.2-1.el7
[2025-06-04 05:17:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 05:17:54] cg-vwn286.simple-grid.lan
[2025-06-04 05:17:54] apptainer works
[2025-06-04 05:17:55] Set ATHENA_PROC_NUMBER=8
[2025-06-04 05:17:55] Set ATHENA_CORE_NUMBER=8
[2025-06-04 05:17:55] Starting ATLAS job with PandaID=6677783083
[2025-06-04 05:17:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:18:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:18:07] 2025-06-04 07:09:06,395 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6677783083/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:18:07] 2025-06-04 07:09:06,396 | INFO     | extracted standard info from prmon json
[2025-06-04 10:18:07] 2025-06-04 07:09:06,396 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:18:07] 2025-06-04 07:09:06,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:18:07] 2025-06-04 07:09:06,397 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:18:07] 2025-06-04 07:09:06,397 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:18:07] 2025-06-04 07:09:06,402 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:18:07] 2025-06-04 07:09:06,402 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,404 | INFO     | sum of deviations: 32527021826.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,405 | INFO     | mean x: 1749014000.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,405 | INFO     | mean y: 2452819.2133333334
[2025-06-04 10:18:07] 2025-06-04 07:09:06,405 | INFO     | -- intersect: -16104752227.523592
[2025-06-04 10:18:07] 2025-06-04 07:09:06,405 | INFO     | intersect: -16104752227.523592
[2025-06-04 10:18:07] 2025-06-04 07:09:06,413 | INFO     | chi2: 2.7216504658594163
[2025-06-04 10:18:07] 2025-06-04 07:09:06,414 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,416 | INFO     | sum of deviations: 46340412106.99999
[2025-06-04 10:18:07] 2025-06-04 07:09:06,416 | INFO     | mean x: 1749013847.5
[2025-06-04 10:18:07] 2025-06-04 07:09:06,416 | INFO     | mean y: 2461790.3181818184
[2025-06-04 10:18:07] 2025-06-04 07:09:06,416 | INFO     | -- intersect: -24545511738.153885
[2025-06-04 10:18:07] 2025-06-04 07:09:06,416 | INFO     | intersect: -24545511738.153885
[2025-06-04 10:18:07] 2025-06-04 07:09:06,417 | INFO     | chi2: 1.9550077270903226
[2025-06-04 10:18:07] 2025-06-04 07:09:06,417 | INFO     | current chi2=1.9550077270903226 (change=28.168302593809035 %)
[2025-06-04 10:18:07] 2025-06-04 07:09:06,417 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,419 | INFO     | sum of deviations: 45074866884.000015
[2025-06-04 10:18:07] 2025-06-04 07:09:06,419 | INFO     | mean x: 1749013695.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,419 | INFO     | mean y: 2460913.093023256
[2025-06-04 10:18:07] 2025-06-04 07:09:06,419 | INFO     | -- intersect: -25580055092.43761
[2025-06-04 10:18:07] 2025-06-04 07:09:06,420 | INFO     | intersect: -25580055092.43761
[2025-06-04 10:18:07] 2025-06-04 07:09:06,420 | INFO     | chi2: 1.956089367331843
[2025-06-04 10:18:07] 2025-06-04 07:09:06,420 | INFO     | current chi2=1.956089367331843 (change=-0.05532664789669047 %)
[2025-06-04 10:18:07] 2025-06-04 07:09:06,420 | INFO     | right removable region: 214
[2025-06-04 10:18:07] 2025-06-04 07:09:06,421 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,423 | INFO     | sum of deviations: -13182139650.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,423 | INFO     | mean x: 1749014152.5
[2025-06-04 10:18:07] 2025-06-04 07:09:06,423 | INFO     | mean y: 2482914.609090909
[2025-06-04 10:18:07] 2025-06-04 07:09:06,424 | INFO     | -- intersect: 6985478034.708457
[2025-06-04 10:18:07] 2025-06-04 07:09:06,424 | INFO     | intersect: 6985478034.708457
[2025-06-04 10:18:07] 2025-06-04 07:09:06,424 | INFO     | chi2: 0.8479620570192317
[2025-06-04 10:18:07] 2025-06-04 07:09:06,424 | INFO     | current chi2=0.8479620570192317 (change=68.84382959325123 %)
[2025-06-04 10:18:07] 2025-06-04 07:09:06,425 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,427 | INFO     | sum of deviations: -19135311247.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,427 | INFO     | mean x: 1749014305.0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,427 | INFO     | mean y: 2487001.576744186
[2025-06-04 10:18:07] 2025-06-04 07:09:06,427 | INFO     | -- intersect: 10862853561.042795
[2025-06-04 10:18:07] 2025-06-04 07:09:06,427 | INFO     | intersect: 10862853561.042795
[2025-06-04 10:18:07] 2025-06-04 07:09:06,427 | INFO     | chi2: 0.800881491096497
[2025-06-04 10:18:07] 2025-06-04 07:09:06,428 | INFO     | current chi2=0.800881491096497 (change=5.552201956798982 %)
[2025-06-04 10:18:07] 2025-06-04 07:09:06,428 | INFO     | left removable region: 20
[2025-06-04 10:18:07] 2025-06-04 07:09:06,428 | INFO     | sum of square deviations: 2263977332.5
[2025-06-04 10:18:07] 2025-06-04 07:09:06,435 | INFO     | sum of deviations: -3090055223.000002
[2025-06-04 10:18:07] 2025-06-04 07:09:06,435 | INFO     | mean x: 1749014274.5
[2025-06-04 10:18:07] 2025-06-04 07:09:06,435 | INFO     | mean y: 2495634.81443299
[2025-06-04 10:18:07] 2025-06-04 07:09:06,436 | INFO     | -- intersect: 2389688570.2014236
[2025-06-04 10:18:07] 2025-06-04 07:09:06,436 | INFO     | intersect: 2389688570.2014236
[2025-06-04 10:18:07] 2025-06-04 07:09:06,436 | INFO     | chi2: 0.009945328187632668
[2025-06-04 10:18:07] 2025-06-04 07:09:06,436 | INFO     | -- intersect: 2389688570.2014236
[2025-06-04 10:18:07] 2025-06-04 07:09:06,436 | INFO     | current memory leak: -1.36 B/s (using 194 data points, chi2=0.01)
[2025-06-04 10:18:07] 2025-06-04 07:09:06,437 | INFO     | ..............................
[2025-06-04 10:18:07] 2025-06-04 07:09:06,437 | INFO     | . Timing measurements:
[2025-06-04 10:18:07] 2025-06-04 07:09:06,438 | INFO     | . get job = 0 s
[2025-06-04 10:18:07] 2025-06-04 07:09:06,438 | INFO     | . initial setup = 2 s
[2025-06-04 10:18:07] 2025-06-04 07:09:06,438 | INFO     | . payload setup = 15 s
[2025-06-04 10:18:07] 2025-06-04 07:09:06,438 | INFO     | . stage-in = 0 s
[2025-06-04 10:18:07] 2025-06-04 07:09:06,438 | INFO     | . payload execution = 13705 s
[2025-06-04 10:18:07] 2025-06-04 07:09:06,438 | INFO     | . stage-out = 3 s
[2025-06-04 10:18:07] 2025-06-04 07:09:06,438 | INFO     | . log creation = 1 s
[2025-06-04 10:18:07] 2025-06-04 07:09:06,438 | INFO     | ..............................
[2025-06-04 10:18:07] 2025-06-04 07:09:06,595 | INFO     | 
[2025-06-04 10:18:07] 2025-06-04 07:09:06,595 | INFO     | job summary report
[2025-06-04 10:18:07] 2025-06-04 07:09:06,595 | INFO     | --------------------------------------------------
[2025-06-04 10:18:07] 2025-06-04 07:09:06,595 | INFO     | PanDA job id: 6677783083
[2025-06-04 10:18:07] 2025-06-04 07:09:06,595 | INFO     | task id: 45006595
[2025-06-04 10:18:07] 2025-06-04 07:09:06,595 | INFO     | errors: (none)
[2025-06-04 10:18:07] 2025-06-04 07:09:06,596 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:18:07] 2025-06-04 07:09:06,596 | INFO     | pilot state: finished 
[2025-06-04 10:18:07] 2025-06-04 07:09:06,596 | INFO     | transexitcode: 0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,596 | INFO     | exeerrorcode: 0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,596 | INFO     | exeerrordiag: 
[2025-06-04 10:18:07] 2025-06-04 07:09:06,596 | INFO     | exitcode: 0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,596 | INFO     | exitmsg: OK
[2025-06-04 10:18:07] 2025-06-04 07:09:06,596 | INFO     | cpuconsumptiontime: 50591 s
[2025-06-04 10:18:07] 2025-06-04 07:09:06,596 | INFO     | nevents: 400
[2025-06-04 10:18:07] 2025-06-04 07:09:06,596 | INFO     | neventsw: 0
[2025-06-04 10:18:07] 2025-06-04 07:09:06,597 | INFO     | pid: 19188
[2025-06-04 10:18:07] 2025-06-04 07:09:06,597 | INFO     | pgrp: 19188
[2025-06-04 10:18:07] 2025-06-04 07:09:06,597 | INFO     | corecount: 8
[2025-06-04 10:18:07] 2025-06-04 07:09:06,597 | INFO     | event service: False
[2025-06-04 10:18:07] 2025-06-04 07:09:06,597 | INFO     | sizes: {0: 2405184, 1: 2405184, 12: 2405212, 15: 2405446, 22: 2405474, 13725: 2435253, 13730: 2444250, 13817: 2444364}
[2025-06-04 10:18:07] 2025-06-04 07:09:06,597 | INFO     | --------------------------------------------------
[2025-06-04 10:18:07] 2025-06-04 07:09:06,597 | INFO     | 
[2025-06-04 10:18:07] 2025-06-04 07:09:06,597 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 10:18:07] 2025-06-04 07:09:06,878 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,879 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,881 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:18:07] 2025-06-04 07:09:06,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:18:07] 2025-06-04 07:09:06,881 | INFO     | job 6677783083 has completed (purged errors)
[2025-06-04 10:18:07] 2025-06-04 07:09:06,881 | INFO     | overall cleanup function is called
[2025-06-04 10:18:07] 2025-06-04 07:09:07,890 | INFO     | --- collectZombieJob: --- 10, [19188]
[2025-06-04 10:18:07] 2025-06-04 07:09:07,891 | INFO     | zombie collector waiting for pid 19188
[2025-06-04 10:18:07] 2025-06-04 07:09:07,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:18:07] 2025-06-04 07:09:07,891 | INFO     | collected zombie processes
[2025-06-04 10:18:07] 2025-06-04 07:09:07,891 | INFO     | will attempt to kill all subprocesses of pid=19188
[2025-06-04 10:18:07] 2025-06-04 07:09:08,017 | INFO     | process IDs to be killed: [19188] (in reverse order)
[2025-06-04 10:18:07] 2025-06-04 07:09:08,912 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:18:07] 2025-06-04 07:09:08,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:18:07] 2025-06-04 07:09:08,916 | INFO     | did not find any defunct processes belonging to 19188
[2025-06-04 10:18:07] 2025-06-04 07:09:08,920 | INFO     | did not find any defunct processes belonging to 19188
[2025-06-04 10:18:07] 2025-06-04 07:09:08,920 | INFO     | ready for new job
[2025-06-04 10:18:07] 2025-06-04 07:09:08,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:18:07] 2025-06-04 07:09:08,922 | INFO     | **************************************
[2025-06-04 10:18:07] 2025-06-04 07:09:08,923 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:18:07] 2025-06-04 07:09:08,923 | INFO     | **************************************
[2025-06-04 10:18:07] 2025-06-04 07:09:08,923 | INFO     | 
[2025-06-04 10:18:07] 2025-06-04 07:09:08,924 | INFO     | pilot is running in a VM
[2025-06-04 10:18:07] 2025-06-04 07:09:08,924 | INFO     | architecture information:
[2025-06-04 10:18:07] 2025-06-04 07:09:08,942 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:18:07] 2025-06-04 07:09:09,243 | INFO     | cat /etc/os-release:
[2025-06-04 10:18:07] NAME="CentOS Linux"
[2025-06-04 10:18:07] VERSION="7 (Core)"
[2025-06-04 10:18:07] ID="centos"
[2025-06-04 10:18:07] ID_LIKE="rhel fedora"
[2025-06-04 10:18:07] VERSION_ID="7"
[2025-06-04 10:18:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:18:07] ANSI_COLOR="0;31"
[2025-06-04 10:18:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:18:07] HOME_URL="https://www.centos.org/"
[2025-06-04 10:18:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:18:07] 
[2025-06-04 10:18:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:18:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:18:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:18:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:18:07] 
[2025-06-04 10:18:07] 2025-06-04 07:09:09,244 | INFO     | **************************************
[2025-06-04 10:18:07] 2025-06-04 07:09:09,747 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 10:18:07] 2025-06-04 07:09:09,975 | INFO     | sufficient remaining disk space (496770220032 B)
[2025-06-04 10:18:07] 2025-06-04 07:09:09,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:18:07] 2025-06-04 07:09:09,976 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:18:07] 2025-06-04 07:09:09,976 | INFO     | update_server=False
[2025-06-04 10:18:07] 2025-06-04 07:09:09,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:18:07] 2025-06-04 07:09:09,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:18:07] 2025-06-04 07:09:09,977 | INFO     | aborting loop
[2025-06-04 10:18:07] 2025-06-04 07:09:10,143 | INFO     | all data control threads have been joined
[2025-06-04 10:18:07] 2025-06-04 07:09:10,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:18:07] 2025-06-04 07:09:10,615 | INFO     | all payload control threads have been joined
[2025-06-04 10:18:07] 2025-06-04 07:09:10,643 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:18:07] 2025-06-04 07:09:10,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:18:07] 2025-06-04 07:09:10,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:18:07] 2025-06-04 07:09:10,981 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:10,983 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:11,148 | INFO     | [data] control thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:11,168 | INFO     | [job] validate thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:11,264 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:11,270 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:11,270 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:11,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:18:07] 2025-06-04 07:09:11,357 | INFO     | all job control threads have been joined
[2025-06-04 10:18:07] 2025-06-04 07:09:11,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:18:07] 2025-06-04 07:09:11,622 | INFO     | [payload] control thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:11,908 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:12,140 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:12,236 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:12,305 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:12,365 | INFO     | [job] control thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:12,378 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:12,616 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:15,349 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:18:07] 2025-06-04 07:09:17,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574395111232)>', '<ExcThread(monitor, started 140574103414528)>']
[2025-06-04 10:18:07] 2025-06-04 07:09:17,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:18:07] 2025-06-04 07:09:17,685 | INFO     | [monitor] control thread has ended
[2025-06-04 10:18:07] 2025-06-04 07:09:22,242 | INFO     | all workflow threads have been joined
[2025-06-04 10:18:07] 2025-06-04 07:09:22,243 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:18:07] 2025-06-04 07:09:22,243 | INFO     | traces error code: 0
[2025-06-04 10:18:07] 2025-06-04 07:09:22,243 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:18:07] 2025-06-04 07:09:22,659 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:18:07] 2025-06-04 07:09:22,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:18:07] 2025-06-04 07:09:22,830 [wrapper] pilotpid: 10625
[2025-06-04 10:18:07] 2025-06-04 07:09:22,928 [wrapper] Pilot exit status: 0
[2025-06-04 10:18:07] 2025-06-04 07:09:23,350 [wrapper] pandaids: 6677783083
[2025-06-04 10:18:07] 2025-06-04 07:09:24,282 [wrapper] cleanup supervisor_pilot 14627 10626
[2025-06-04 10:18:07] 2025-06-04 07:09:24,321 [wrapper] Test setup, not cleaning
[2025-06-04 10:18:07] 2025-06-04 07:09:24,388 [wrapper] apfmon messages muted
[2025-06-04 10:18:07] 2025-06-04 07:09:24,486 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:18:07] 2025-06-04 07:09:24,595 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:18:07]  *** Error codes and diagnostics ***
[2025-06-04 10:18:07]     "exeErrorCode": 0,
[2025-06-04 10:18:07]     "exeErrorDiag": "",
[2025-06-04 10:18:07]     "pilotErrorCode": 0,
[2025-06-04 10:18:07]     "pilotErrorDiag": "",
[2025-06-04 10:18:07]  *** Listing of results directory ***
[2025-06-04 10:18:07] total 397276
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:39 pilot3.tar.gz
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc      5111 Jun  3 18:40 queuedata.json
[2025-06-04 10:18:07] -rwx------. 1 boinc boinc     37140 Jun  3 18:41 runpilot2-wrapper.sh
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc       100 Jun  4 05:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:18:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 05:17 run_atlas
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc       105 Jun  4 05:17 job.xml
[2025-06-04 10:18:07] -rw-r--r--. 2 boinc boinc 216786329 Jun  4 05:17 EVNT.45006593._001566.pool.root.1
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc      6391 Jun  4 05:17 init_data.xml
[2025-06-04 10:18:07] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:17 start_atlas.sh
[2025-06-04 10:18:07] drwxrwx--x. 2 boinc boinc        68 Jun  4 05:17 shared
[2025-06-04 10:18:07] -rw-r--r--. 2 boinc boinc    508887 Jun  4 05:17 input.tar.gz
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc         0 Jun  4 05:17 boinc_lockfile
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc      2525 Jun  4 05:17 pandaJob.out
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc    986077 Jun  4 05:18 agis_schedconf.cvmfs.json
[2025-06-04 10:18:07] drwx------. 4 boinc boinc      4096 Jun  4 05:18 pilot3
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc 183022739 Jun  4 09:06 HITS.45006595._039047.pool.root.1
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc       530 Jun  4 09:06 boinc_task_state.xml
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc      1018 Jun  4 09:07 memory_monitor_summary.json
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc   1603667 Jun  4 09:07 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc    387174 Jun  4 09:07 log.45006595._039047.job.log.tgz.1
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc        95 Jun  4 09:08 pilot_heartbeat.json
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc      7687 Jun  4 09:09 heartbeat.json
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc      4416 Jun  4 09:09 pilotlog.txt
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc   1196511 Jun  4 09:09 log.45006595._039047.job.log.1
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc       357 Jun  4 09:09 output.list
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc       620 Jun  4 09:09 runtime_log
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc   1607680 Jun  4 09:09 result.tar.gz
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc      8659 Jun  4 09:09 runtime_log.err
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc       657 Jun  4 09:09 Ad0MDmGtjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm95kKDmthZ13m.diag
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc      8192 Jun  4 10:18 boinc_mmap_file
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc        28 Jun  4 10:18 wrapper_checkpoint.txt
[2025-06-04 10:18:07] -rw-r--r--. 1 boinc boinc     20482 Jun  4 10:18 stderr.txt
[2025-06-04 10:18:07] HITS file was successfully produced:
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc 183022739 Jun  4 09:06 shared/HITS.pool.root.1
[2025-06-04 10:18:07]  *** Contents of shared directory: ***
[2025-06-04 10:18:07] total 392532
[2025-06-04 10:18:07] -rw-r--r--. 2 boinc boinc 216786329 Jun  4 05:17 ATLAS.root_0
[2025-06-04 10:18:07] -rw-r--r--. 2 boinc boinc     15093 Jun  4 05:17 start_atlas.sh
[2025-06-04 10:18:07] -rw-r--r--. 2 boinc boinc    508887 Jun  4 05:17 input.tar.gz
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc 183022739 Jun  4 09:06 HITS.pool.root.1
[2025-06-04 10:18:07] -rw-------. 1 boinc boinc   1607680 Jun  4 09:09 result.tar.gz
10:18:09 (6873): run_atlas exited; CPU time 50766.802458
10:18:09 (6873): called boinc_finish(0)

</stderr_txt>
]]>

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