Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:39:55 (2773918): wrapper (7.7.26015): starting
12:39:55 (2773918): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 12:39:55] Arguments: --nthreads 12
[2025-06-03 12:39:55] Threads: 12
[2025-06-03 12:39:55] Checking for CVMFS
[2025-06-03 12:39:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 12:39:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 12:39:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 12:39:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 12:39:56] 2.11.5.0 3774530 32126 217916 146753 0 422 30485219 45568001 24752 130560 0 324791993 99.786 204976849 17032 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 12:39:56] CVMFS is ok
[2025-06-03 12:39:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 12:39:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 12:39:56] Further information can be found at the LHC@home message board.
[2025-06-03 12:39:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 12:39:56] Checking for apptainer binary...
[2025-06-03 12:39:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 12:39:56] Running /usr/bin/apptainer --version
[2025-06-03 12:39:57] apptainer version 1.4.0-1.el9
[2025-06-03 12:39:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 12:39:58] wns0055.triumf.lcg
[2025-06-03 12:39:58] apptainer works
[2025-06-03 12:39:58] Set ATHENA_PROC_NUMBER=12
[2025-06-03 12:39:58] Set ATHENA_CORE_NUMBER=12
[2025-06-03 12:39:58] Starting ATLAS job with PandaID=6677919303
[2025-06-03 12:39:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:45:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:45:01] 2025-06-03 19:44:47,678 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677919303/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | INFO     | extracted standard info from prmon json
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | WARNING  | wrong length of table data, x=[1748979701.0], y=[2104.0] (must be same and length>=4)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | ..............................
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . Timing measurements:
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . get job = 0 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . initial setup = 3 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . payload setup = 18 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . stage-in = 0 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . payload execution = 60 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . stage-out = 1 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . log creation = 0 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | ..............................
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 12:45:01] 2025-06-03 19:44:47,681 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677919303/pilotlog.txt
[2025-06-03 12:45:01] 2025-06-03 19:44:47,695 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 12:45:01] - Log from pilotlog.txt -
[2025-06-03 12:45:01] 2025-06-03 19:44:47,678 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 12:45:01] 2025-06-03 19:44:47,678 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677919303/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | INFO     | extracted standard info from prmon json
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | WARNING  | wrong length of table data, x=[1748979701.0], y=[2104.0] (must be same and length>=4)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | ..............................
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . Timing measurements:
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . get job = 0 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . initial setup = 3 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . payload setup = 18 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . stage-in = 0 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . payload execution = 60 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . stage-out = 1 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . log creation = 0 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | ..............................
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 12:45:01] 2025-06-03 19:44:47,681 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677919303/pilotlog.txt
[2025-06-03 12:45:01] 2025-06-03 19:44:47,695 | WARNING  | 
[2025-06-03 12:45:01] [begin log extracts]
[2025-06-03 12:45:01] - Log from pilotlog.txt -
[2025-06-03 12:45:01] 2025-06-03 19:44:47,678 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 12:45:01] 2025-06-03 19:44:47,678 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677919303/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | INFO     | extracted standard info from prmon json
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:45:01] 2025-06-03 19:44:47,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | WARNING  | wrong length of table data, x=[1748979701.0], y=[2104.0] (must be same and length>=4)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | ..............................
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . Timing measurements:
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . get job = 0 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . initial setup = 3 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . payload setup = 18 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . stage-in = 0 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . payload execution = 60 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . stage-out = 1 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | . log creation = 0 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | ..............................
[2025-06-03 12:45:01] 2025-06-03 19:44:47,680 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 12:45:01] 2025-06-03 19:44:47,681 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677919303/pilotlog.txt
[2025-06-03 12:45:01] [end log extracts]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,695 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,696 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | 
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | job summary report
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | --------------------------------------------------
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | PanDA job id: 6677919303
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | task id: 45006595
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 12:42:21,096 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | pilot state: failed 
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | transexitcode: 65
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | exeerrorcode: 65
[2025-06-03 12:45:01] 2025-06-03 19:44:47,836 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | exitcode: 65
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | nevents: 0
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | neventsw: 0
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | pid: 2791707
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | pgrp: 2791707
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | corecount: 12
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | event service: False
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | sizes: {0: 2404356, 1: 2405209, 12: 2405209, 22: 2405471, 83: 2428708, 86: 2433099, 221: 2433213}
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | --------------------------------------------------
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | 
[2025-06-03 12:45:01] 2025-06-03 19:44:47,837 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 12:45:01] 2025-06-03 19:44:47,852 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,852 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,852 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,852 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,852 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,852 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | job 6677919303 has completed (purged errors)
[2025-06-03 12:45:01] 2025-06-03 19:44:47,853 | INFO     | overall cleanup function is called
[2025-06-03 12:45:01] 2025-06-03 19:44:48,860 | INFO     | --- collectZombieJob: --- 10, [2791707]
[2025-06-03 12:45:01] 2025-06-03 19:44:48,860 | INFO     | zombie collector waiting for pid 2791707
[2025-06-03 12:45:01] 2025-06-03 19:44:48,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:45:01] 2025-06-03 19:44:48,860 | INFO     | collected zombie processes
[2025-06-03 12:45:01] 2025-06-03 19:44:48,860 | INFO     | will attempt to kill all subprocesses of pid=2791707
[2025-06-03 12:45:01] 2025-06-03 19:44:49,430 | INFO     | process IDs to be killed: [2791707] (in reverse order)
[2025-06-03 12:45:01] 2025-06-03 19:44:49,984 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:45:01] 2025-06-03 19:44:49,984 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:45:01] 2025-06-03 19:44:50,013 | INFO     | did not find any defunct processes belonging to 2791707
[2025-06-03 12:45:01] 2025-06-03 19:44:50,054 | INFO     | did not find any defunct processes belonging to 2791707
[2025-06-03 12:45:01] 2025-06-03 19:44:50,055 | INFO     | ready for new job
[2025-06-03 12:45:01] 2025-06-03 19:44:50,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:45:01] 2025-06-03 19:44:50,056 | INFO     | **************************************
[2025-06-03 12:45:01] 2025-06-03 19:44:50,056 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:45:01] 2025-06-03 19:44:50,056 | INFO     | **************************************
[2025-06-03 12:45:01] 2025-06-03 19:44:50,056 | INFO     | 
[2025-06-03 12:45:01] 2025-06-03 19:44:50,074 | INFO     | architecture information:
[2025-06-03 12:45:01] 2025-06-03 19:44:50,079 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:45:01] 2025-06-03 19:44:50,205 | INFO     | cat /etc/os-release:
[2025-06-03 12:45:01] NAME="CentOS Linux"
[2025-06-03 12:45:01] VERSION="7 (Core)"
[2025-06-03 12:45:01] ID="centos"
[2025-06-03 12:45:01] ID_LIKE="rhel fedora"
[2025-06-03 12:45:01] VERSION_ID="7"
[2025-06-03 12:45:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:45:01] ANSI_COLOR="0;31"
[2025-06-03 12:45:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:45:01] HOME_URL="https://www.centos.org/"
[2025-06-03 12:45:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:45:01] 
[2025-06-03 12:45:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:45:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:45:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:45:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:45:01] 
[2025-06-03 12:45:01] 2025-06-03 19:44:50,205 | INFO     | **************************************
[2025-06-03 12:45:01] 2025-06-03 19:44:50,710 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 12:45:01] 2025-06-03 19:44:50,773 | INFO     | sufficient remaining disk space (1734581682176 B)
[2025-06-03 12:45:01] 2025-06-03 19:44:50,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:45:01] 2025-06-03 19:44:50,773 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:45:01] 2025-06-03 19:44:50,773 | INFO     | update_server=False
[2025-06-03 12:45:01] 2025-06-03 19:44:50,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:45:01] 2025-06-03 19:44:50,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:45:01] 2025-06-03 19:44:50,775 | INFO     | aborting loop
[2025-06-03 12:45:01] 2025-06-03 19:44:50,775 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:45:01] 2025-06-03 19:44:50,775 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:45:01] 2025-06-03 19:44:50,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:45:01] 2025-06-03 19:44:50,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:45:01] 2025-06-03 19:44:50,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:45:01] 2025-06-03 19:44:50,887 | INFO     | all payload control threads have been joined
[2025-06-03 12:45:01] 2025-06-03 19:44:50,954 | INFO     | all job control threads have been joined
[2025-06-03 12:45:01] 2025-06-03 19:44:51,074 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:45:01] 2025-06-03 19:44:51,390 | INFO     | all data control threads have been joined
[2025-06-03 12:45:01] 2025-06-03 19:44:51,780 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:51,781 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:51,893 | INFO     | [payload] control thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:51,898 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:51,962 | INFO     | [job] control thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:52,015 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:52,221 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:52,378 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:52,400 | INFO     | [data] control thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:52,462 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:52,578 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:52,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:45:01] 2025-06-03 19:44:53,082 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:53,256 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:53,256 | INFO     | [job] validate thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:53,865 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:54,799 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:45:01] 2025-06-03 19:44:56,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629267973952)>', '<ExcThread(monitor, started 139628875065088)>']
[2025-06-03 12:45:01] 2025-06-03 19:44:56,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:45:01] 2025-06-03 19:44:56,822 | INFO     | [monitor] control thread has ended
[2025-06-03 12:45:01] 2025-06-03 19:45:01,124 | INFO     | all workflow threads have been joined
[2025-06-03 12:45:01] 2025-06-03 19:45:01,124 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:45:01] 2025-06-03 19:45:01,124 | INFO     | traces error code: 0
[2025-06-03 12:45:01] 2025-06-03 19:45:01,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:45:01] 2025-06-03 19:45:01,524 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:45:01] 2025-06-03 19:45:01,528 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:45:01] 2025-06-03 19:45:01,532 [wrapper] pilotpid: 2778600
[2025-06-03 12:45:01] 2025-06-03 19:45:01,535 [wrapper] Pilot exit status: 0
[2025-06-03 12:45:01] 2025-06-03 19:45:01,576 [wrapper] pandaids: 6677919303
[2025-06-03 12:45:01] 2025-06-03 19:45:01,659 [wrapper] cleanup supervisor_pilot 2778606 2778601
[2025-06-03 12:45:01] 2025-06-03 19:45:01,662 [wrapper] Test setup, not cleaning
[2025-06-03 12:45:01] 2025-06-03 19:45:01,671 [wrapper] apfmon messages muted
[2025-06-03 12:45:01] 2025-06-03 19:45:01,674 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:45:01] 2025-06-03 19:45:01,677 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:45:01]  *** Error codes and diagnostics ***
[2025-06-03 12:45:01]     "exeErrorCode": 65,
[2025-06-03 12:45:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 12:45:01]     "pilotErrorCode": 1305,
[2025-06-03 12:45:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 12:45:01]  *** Listing of results directory ***
[2025-06-03 12:45:01] total 216440
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc    495897 Jun  3 10:46 pilot3.tar.gz
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc      5111 Jun  3 11:01 queuedata.json
[2025-06-03 12:45:01] -rwx------. 1 boinc boinc     37140 Jun  3 11:01 runpilot2-wrapper.sh
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc       100 Jun  3 12:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:45:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 12:39 run_atlas
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc       105 Jun  3 12:39 job.xml
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc      6601 Jun  3 12:39 init_data.xml
[2025-06-03 12:45:01] -rw-r--r--. 2 boinc boinc 217595508 Jun  3 12:39 EVNT.45006593._001671.pool.root.1
[2025-06-03 12:45:01] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:39 start_atlas.sh
[2025-06-03 12:45:01] drwxrwx--x. 2 boinc boinc      4096 Jun  3 12:39 shared
[2025-06-03 12:45:01] -rw-r--r--. 2 boinc boinc    508882 Jun  3 12:39 input.tar.gz
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc         0 Jun  3 12:39 boinc_lockfile
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc      2525 Jun  3 12:39 pandaJob.out
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc    986893 Jun  3 12:40 agis_schedconf.cvmfs.json
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc   1603667 Jun  3 12:40 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:45:01] drwx------. 4 boinc boinc      4096 Jun  3 12:40 pilot3
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc       524 Jun  3 12:42 boinc_task_state.xml
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc       951 Jun  3 12:42 memory_monitor_summary.json
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc     20762 Jun  3 12:42 log.45006595._041689.job.log.tgz.1
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc        95 Jun  3 12:44 pilot_heartbeat.json
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc      8334 Jun  3 12:44 heartbeat.json
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:45 boinc_mmap_file
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc      4475 Jun  3 12:45 pilotlog.txt
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc        23 Jun  3 12:45 wrapper_checkpoint.txt
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc     80038 Jun  3 12:45 log.45006595._041689.job.log.1
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc       188 Jun  3 12:45 output.list
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:45 runtime_log
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc    122880 Jun  3 12:45 result.tar.gz
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc      8484 Jun  3 12:45 runtime_log.err
[2025-06-03 12:45:01] -rw-------. 1 boinc boinc       647 Jun  3 12:45 JmiKDmZ8kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxZlKDm12uQ7n.diag
[2025-06-03 12:45:01] -rw-r--r--. 1 boinc boinc     21678 Jun  3 12:45 stderr.txt
[2025-06-03 12:45:02] No HITS result produced
[2025-06-03 12:45:02]  *** Contents of shared directory: ***
[2025-06-03 12:45:02] total 213136
[2025-06-03 12:45:02] -rw-r--r--. 2 boinc boinc 217595508 Jun  3 12:39 ATLAS.root_0
[2025-06-03 12:45:02] -rw-r--r--. 2 boinc boinc     15093 Jun  3 12:39 start_atlas.sh
[2025-06-03 12:45:02] -rw-r--r--. 2 boinc boinc    508882 Jun  3 12:39 input.tar.gz
[2025-06-03 12:45:02] -rw-------. 1 boinc boinc    122880 Jun  3 12:45 result.tar.gz
12:45:03 (2773918): run_atlas exited; CPU time 27.331066
12:45:03 (2773918): called boinc_finish(0)

</stderr_txt>
]]>

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