Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:11:57 (819695): wrapper (7.7.26015): starting
15:11:57 (819695): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 15:11:57] Arguments: --nthreads 8
[2025-06-03 15:11:57] Threads: 8
[2025-06-03 15:11:57] Checking for CVMFS
[2025-06-03 15:11:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 15:11:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 15:11:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 15:11:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 15:11:58] 2.12.6.0 9368 300 71576 146752 0 187 17890015 32935936 3014 16776704 0 1331675 99.996 82596 44889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 15:11:58] CVMFS is ok
[2025-06-03 15:11:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 15:11:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 15:11:58] Further information can be found at the LHC@home message board.
[2025-06-03 15:11:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 15:11:58] Checking for apptainer binary...
[2025-06-03 15:11:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 15:11:58] Running /usr/bin/apptainer --version
[2025-06-03 15:11:58] apptainer version 1.4.1-1.el9
[2025-06-03 15:11:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 15:11:58] c-8-24.aglt2.org
[2025-06-03 15:11:58] apptainer works
[2025-06-03 15:11:58] Set ATHENA_PROC_NUMBER=8
[2025-06-03 15:11:58] Set ATHENA_CORE_NUMBER=8
[2025-06-03 15:11:58] Starting ATLAS job with PandaID=6667925220
[2025-06-03 15:11:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 17:18:33]  *** The last 200 lines of the pilot log: ***
[2025-06-03 17:18:33] 2025-06-03 21:18:18,007 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 17:18:33] 2025-06-03 21:18:18,007 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6667925220/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 17:18:33] 2025-06-03 21:18:18,008 | INFO     | extracted standard info from prmon json
[2025-06-03 17:18:33] 2025-06-03 21:18:18,008 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 17:18:33] 2025-06-03 21:18:18,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 17:18:33] 2025-06-03 21:18:18,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 17:18:33] 2025-06-03 21:18:18,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 17:18:33] 2025-06-03 21:18:18,012 | INFO     | fitting pss+swap vs Time
[2025-06-03 17:18:33] 2025-06-03 21:18:18,012 | INFO     | sum of square deviations: 591173875.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,013 | INFO     | sum of deviations: 39666587974.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,013 | INFO     | mean x: 1748981703.5
[2025-06-03 17:18:33] 2025-06-03 21:18:18,013 | INFO     | mean y: 2031747.8064516129
[2025-06-03 17:18:33] 2025-06-03 21:18:18,013 | INFO     | -- intersect: -117351152384.01794
[2025-06-03 17:18:33] 2025-06-03 21:18:18,013 | INFO     | intersect: -117351152384.01794
[2025-06-03 17:18:33] 2025-06-03 21:18:18,014 | INFO     | chi2: 4.002723603868808
[2025-06-03 17:18:33] 2025-06-03 21:18:18,014 | INFO     | sum of square deviations: 522502820.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,015 | INFO     | sum of deviations: 44389063526.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,015 | INFO     | mean x: 1748981551.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,015 | INFO     | mean y: 2041732.5378151261
[2025-06-03 17:18:33] 2025-06-03 21:18:18,015 | INFO     | -- intersect: -148582138488.99863
[2025-06-03 17:18:33] 2025-06-03 21:18:18,015 | INFO     | intersect: -148582138488.99863
[2025-06-03 17:18:33] 2025-06-03 21:18:18,015 | INFO     | chi2: 3.2393468279872444
[2025-06-03 17:18:33] 2025-06-03 21:18:18,016 | INFO     | current chi2=3.2393468279872444 (change=19.071433639428072 %)
[2025-06-03 17:18:33] 2025-06-03 21:18:18,016 | INFO     | right removable region: 118
[2025-06-03 17:18:33] 2025-06-03 21:18:18,016 | INFO     | sum of square deviations: 522502820.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,017 | INFO     | sum of deviations: 15518220659.999994
[2025-06-03 17:18:33] 2025-06-03 21:18:18,017 | INFO     | mean x: 1748981856.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,017 | INFO     | mean y: 2085091.0168067226
[2025-06-03 17:18:33] 2025-06-03 21:18:18,017 | INFO     | -- intersect: -51942297470.86934
[2025-06-03 17:18:33] 2025-06-03 21:18:18,017 | INFO     | intersect: -51942297470.86934
[2025-06-03 17:18:33] 2025-06-03 21:18:18,017 | INFO     | chi2: 1.799693846063938
[2025-06-03 17:18:33] 2025-06-03 21:18:18,017 | INFO     | current chi2=1.799693846063938 (change=55.038268334979335 %)
[2025-06-03 17:18:33] 2025-06-03 21:18:18,018 | INFO     | sum of square deviations: 459366752.5
[2025-06-03 17:18:33] 2025-06-03 21:18:18,018 | INFO     | sum of deviations: -90395259.50000095
[2025-06-03 17:18:33] 2025-06-03 21:18:18,018 | INFO     | mean x: 1748982008.5
[2025-06-03 17:18:33] 2025-06-03 21:18:18,018 | INFO     | mean y: 2122532.447368421
[2025-06-03 17:18:33] 2025-06-03 21:18:18,019 | INFO     | -- intersect: 346291285.7556314
[2025-06-03 17:18:33] 2025-06-03 21:18:18,019 | INFO     | intersect: 346291285.7556314
[2025-06-03 17:18:33] 2025-06-03 21:18:18,019 | INFO     | chi2: 0.8953701906964817
[2025-06-03 17:18:33] 2025-06-03 21:18:18,019 | INFO     | current chi2=0.8953701906964817 (change=50.24874966068691 %)
[2025-06-03 17:18:33] 2025-06-03 21:18:18,019 | INFO     | sum of square deviations: 401533110.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,020 | INFO     | sum of deviations: -3461818991.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,020 | INFO     | mean x: 1748982161.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,020 | INFO     | mean y: 2131257.5963302753
[2025-06-03 17:18:33] 2025-06-03 21:18:18,020 | INFO     | -- intersect: 15080986547.686901
[2025-06-03 17:18:33] 2025-06-03 21:18:18,020 | INFO     | intersect: 15080986547.686901
[2025-06-03 17:18:33] 2025-06-03 21:18:18,020 | INFO     | chi2: 0.8263024555100087
[2025-06-03 17:18:33] 2025-06-03 21:18:18,021 | INFO     | current chi2=0.8263024555100087 (change=7.71387476421873 %)
[2025-06-03 17:18:33] 2025-06-03 21:18:18,021 | INFO     | left removable region: 30
[2025-06-03 17:18:33] 2025-06-03 21:18:18,021 | INFO     | sum of square deviations: 211285822.0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,021 | INFO     | sum of deviations: 1006395049.5
[2025-06-03 17:18:33] 2025-06-03 21:18:18,021 | INFO     | mean x: 1748982435.5
[2025-06-03 17:18:33] 2025-06-03 21:18:18,022 | INFO     | mean y: 2151858.875
[2025-06-03 17:18:33] 2025-06-03 21:18:18,022 | INFO     | -- intersect: -8328588216.763643
[2025-06-03 17:18:33] 2025-06-03 21:18:18,022 | INFO     | intersect: -8328588216.763643
[2025-06-03 17:18:33] 2025-06-03 21:18:18,022 | INFO     | chi2: 0.038367857114652675
[2025-06-03 17:18:33] 2025-06-03 21:18:18,022 | INFO     | -- intersect: -8328588216.763643
[2025-06-03 17:18:33] 2025-06-03 21:18:18,022 | INFO     | current memory leak: 4.76 B/s (using 88 data points, chi2=0.04)
[2025-06-03 17:18:33] 2025-06-03 21:18:18,023 | INFO     | ..............................
[2025-06-03 17:18:33] 2025-06-03 21:18:18,023 | INFO     | . Timing measurements:
[2025-06-03 17:18:33] 2025-06-03 21:18:18,023 | INFO     | . get job = 0 s
[2025-06-03 17:18:33] 2025-06-03 21:18:18,023 | INFO     | . initial setup = 2 s
[2025-06-03 17:18:33] 2025-06-03 21:18:18,023 | INFO     | . payload setup = 5 s
[2025-06-03 17:18:33] 2025-06-03 21:18:18,023 | INFO     | . stage-in = 0 s
[2025-06-03 17:18:33] 2025-06-03 21:18:18,023 | INFO     | . payload execution = 7535 s
[2025-06-03 17:18:33] 2025-06-03 21:18:18,023 | INFO     | . stage-out = 0 s
[2025-06-03 17:18:33] 2025-06-03 21:18:18,023 | INFO     | . log creation = 0 s
[2025-06-03 17:18:33] 2025-06-03 21:18:18,023 | INFO     | ..............................
[2025-06-03 17:18:33] 2025-06-03 21:18:18,131 | INFO     | 
[2025-06-03 17:18:33] 2025-06-03 21:18:18,131 | INFO     | job summary report
[2025-06-03 17:18:33] 2025-06-03 21:18:18,131 | INFO     | --------------------------------------------------
[2025-06-03 17:18:33] 2025-06-03 21:18:18,132 | INFO     | PanDA job id: 6667925220
[2025-06-03 17:18:33] 2025-06-03 21:18:18,132 | INFO     | task id: 44871837
[2025-06-03 17:18:33] 2025-06-03 21:18:18,132 | INFO     | errors: (none)
[2025-06-03 17:18:33] 2025-06-03 21:18:18,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 17:18:33] 2025-06-03 21:18:18,132 | INFO     | pilot state: finished 
[2025-06-03 17:18:33] 2025-06-03 21:18:18,132 | INFO     | transexitcode: 0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,132 | INFO     | exeerrorcode: 0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,132 | INFO     | exeerrordiag: 
[2025-06-03 17:18:33] 2025-06-03 21:18:18,132 | INFO     | exitcode: 0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,133 | INFO     | exitmsg: OK
[2025-06-03 17:18:33] 2025-06-03 21:18:18,133 | INFO     | cpuconsumptiontime: 53245 s
[2025-06-03 17:18:33] 2025-06-03 21:18:18,133 | INFO     | nevents: 400
[2025-06-03 17:18:33] 2025-06-03 21:18:18,133 | INFO     | neventsw: 0
[2025-06-03 17:18:33] 2025-06-03 21:18:18,133 | INFO     | pid: 836077
[2025-06-03 17:18:33] 2025-06-03 21:18:18,133 | INFO     | pgrp: 836077
[2025-06-03 17:18:33] 2025-06-03 21:18:18,133 | INFO     | corecount: 8
[2025-06-03 17:18:33] 2025-06-03 21:18:18,133 | INFO     | event service: False
[2025-06-03 17:18:33] 2025-06-03 21:18:18,133 | INFO     | sizes: {0: 2405234, 4: 2405440, 11: 2405468, 7545: 2432792, 7547: 2441733, 7550: 2441789, 7556: 2442087}
[2025-06-03 17:18:33] 2025-06-03 21:18:18,133 | INFO     | --------------------------------------------------
[2025-06-03 17:18:33] 2025-06-03 21:18:18,134 | INFO     | 
[2025-06-03 17:18:33] 2025-06-03 21:18:18,134 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 17:18:33] 2025-06-03 21:18:18,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,152 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,152 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,154 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 17:18:33] 2025-06-03 21:18:18,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 17:18:33] 2025-06-03 21:18:18,154 | INFO     | job 6667925220 has completed (purged errors)
[2025-06-03 17:18:33] 2025-06-03 21:18:18,155 | INFO     | overall cleanup function is called
[2025-06-03 17:18:33] 2025-06-03 21:18:19,162 | INFO     | --- collectZombieJob: --- 10, [836077]
[2025-06-03 17:18:33] 2025-06-03 21:18:19,163 | INFO     | zombie collector waiting for pid 836077
[2025-06-03 17:18:33] 2025-06-03 21:18:19,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 17:18:33] 2025-06-03 21:18:19,163 | INFO     | collected zombie processes
[2025-06-03 17:18:33] 2025-06-03 21:18:19,163 | INFO     | will attempt to kill all subprocesses of pid=836077
[2025-06-03 17:18:33] 2025-06-03 21:18:19,415 | INFO     | process IDs to be killed: [836077] (in reverse order)
[2025-06-03 17:18:33] 2025-06-03 21:18:19,482 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 17:18:33] 2025-06-03 21:18:19,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 17:18:33] 2025-06-03 21:18:19,489 | INFO     | did not find any defunct processes belonging to 836077
[2025-06-03 17:18:33] 2025-06-03 21:18:19,496 | INFO     | did not find any defunct processes belonging to 836077
[2025-06-03 17:18:33] 2025-06-03 21:18:19,496 | INFO     | ready for new job
[2025-06-03 17:18:33] 2025-06-03 21:18:19,496 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 17:18:33] 2025-06-03 21:18:19,498 | INFO     | **************************************
[2025-06-03 17:18:33] 2025-06-03 21:18:19,498 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 17:18:33] 2025-06-03 21:18:19,498 | INFO     | **************************************
[2025-06-03 17:18:33] 2025-06-03 21:18:19,498 | INFO     | 
[2025-06-03 17:18:33] 2025-06-03 21:18:19,512 | INFO     | architecture information:
[2025-06-03 17:18:33] 2025-06-03 21:18:19,513 | INFO     | executing command: cat /etc/os-release
[2025-06-03 17:18:33] 2025-06-03 21:18:19,524 | INFO     | cat /etc/os-release:
[2025-06-03 17:18:33] NAME="CentOS Linux"
[2025-06-03 17:18:33] VERSION="7 (Core)"
[2025-06-03 17:18:33] ID="centos"
[2025-06-03 17:18:33] ID_LIKE="rhel fedora"
[2025-06-03 17:18:33] VERSION_ID="7"
[2025-06-03 17:18:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 17:18:33] ANSI_COLOR="0;31"
[2025-06-03 17:18:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 17:18:33] HOME_URL="https://www.centos.org/"
[2025-06-03 17:18:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 17:18:33] 
[2025-06-03 17:18:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 17:18:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 17:18:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 17:18:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 17:18:33] 
[2025-06-03 17:18:33] 2025-06-03 21:18:19,525 | INFO     | **************************************
[2025-06-03 17:18:33] 2025-06-03 21:18:20,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 17:18:33] 2025-06-03 21:18:20,045 | INFO     | sufficient remaining disk space (74512859136 B)
[2025-06-03 17:18:33] 2025-06-03 21:18:20,046 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 17:18:33] 2025-06-03 21:18:20,046 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 17:18:33] 2025-06-03 21:18:20,046 | INFO     | update_server=False
[2025-06-03 17:18:33] 2025-06-03 21:18:20,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 17:18:33] 2025-06-03 21:18:20,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 17:18:33] 2025-06-03 21:18:20,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:18:33] 2025-06-03 21:18:20,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 17:18:33] 2025-06-03 21:18:20,048 | INFO     | aborting loop
[2025-06-03 17:18:33] 2025-06-03 21:18:20,145 | INFO     | all data control threads have been joined
[2025-06-03 17:18:33] 2025-06-03 21:18:20,262 | INFO     | all payload control threads have been joined
[2025-06-03 17:18:33] 2025-06-03 21:18:20,438 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 17:18:33] 2025-06-03 21:18:20,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 17:18:33] 2025-06-03 21:18:20,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 17:18:33] 2025-06-03 21:18:21,052 | INFO     | [job] retrieve thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:21,053 | INFO     | [job] job monitor thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:21,054 | INFO     | [job] queue monitor thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:21,151 | INFO     | [data] control thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:21,267 | INFO     | [payload] control thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:21,276 | INFO     | [job] validate thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:21,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:21,455 | INFO     | [payload] failed_post thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:21,465 | INFO     | [payload] validate_post thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:21,663 | INFO     | all job control threads have been joined
[2025-06-03 17:18:33] 2025-06-03 21:18:21,744 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:21,992 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:22,053 | INFO     | [data] copytool_out thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:22,130 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:22,498 | INFO     | [data] copytool_in thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:22,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 17:18:33] 2025-06-03 21:18:22,667 | INFO     | [job] control thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:26,545 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 17:18:33] 2025-06-03 21:18:28,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983435736896)>', '<ExcThread(monitor, started 139982941431552)>']
[2025-06-03 17:18:33] 2025-06-03 21:18:29,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 17:18:33] 2025-06-03 21:18:29,481 | INFO     | [monitor] control thread has ended
[2025-06-03 17:18:33] 2025-06-03 21:18:33,506 | INFO     | all workflow threads have been joined
[2025-06-03 17:18:33] 2025-06-03 21:18:33,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 17:18:33] 2025-06-03 21:18:33,507 | INFO     | traces error code: 0
[2025-06-03 17:18:33] 2025-06-03 21:18:33,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 17:18:33] 2025-06-03 21:18:33,641 [wrapper] ==== pilot stdout END ====
[2025-06-03 17:18:33] 2025-06-03 21:18:33,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 17:18:33] 2025-06-03 21:18:33,646 [wrapper] pilotpid: 823356
[2025-06-03 17:18:33] 2025-06-03 21:18:33,649 [wrapper] Pilot exit status: 0
[2025-06-03 17:18:33] 2025-06-03 21:18:33,658 [wrapper] pandaids: 6667925220
[2025-06-03 17:18:33] 2025-06-03 21:18:33,703 [wrapper] cleanup supervisor_pilot 1138562 823357
[2025-06-03 17:18:33] 2025-06-03 21:18:33,706 [wrapper] Test setup, not cleaning
[2025-06-03 17:18:33] 2025-06-03 21:18:33,709 [wrapper] apfmon messages muted
[2025-06-03 17:18:33] 2025-06-03 21:18:33,711 [wrapper] ==== wrapper stdout END ====
[2025-06-03 17:18:33] 2025-06-03 21:18:33,713 [wrapper] ==== wrapper stderr END ====
[2025-06-03 17:18:33]  *** Error codes and diagnostics ***
[2025-06-03 17:18:33]     "exeErrorCode": 0,
[2025-06-03 17:18:33]     "exeErrorDiag": "",
[2025-06-03 17:18:33]     "pilotErrorCode": 0,
[2025-06-03 17:18:33]     "pilotErrorDiag": "",
[2025-06-03 17:18:33]  *** Listing of results directory ***
[2025-06-03 17:18:33] total 418080
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas    495897 May 27 23:41 pilot3.tar.gz
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas      5111 May 28 00:00 queuedata.json
[2025-06-03 17:18:33] -rwx------. 1 boincer umatlas     37140 May 28 00:03 runpilot2-wrapper.sh
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas       100 Jun  3 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 17:18:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 15:11 run_atlas
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas       105 Jun  3 15:11 job.xml
[2025-06-03 17:18:33] -rw-r--r--. 2 boincer umatlas 224958450 Jun  3 15:11 EVNT.44871834._003065.pool.root.1
[2025-06-03 17:18:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 15:11 start_atlas.sh
[2025-06-03 17:18:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 15:11 shared
[2025-06-03 17:18:33] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 15:11 input.tar.gz
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas         0 Jun  3 15:11 boinc_lockfile
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas      2559 Jun  3 15:11 pandaJob.out
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas    986893 Jun  3 15:12 agis_schedconf.cvmfs.json
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas   1603667 Jun  3 15:12 agis_ddmendpoints.agis.ALL.json
[2025-06-03 17:18:33] drwx------. 4 boincer umatlas      4096 Jun  3 15:12 pilot3
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas      6659 Jun  3 17:11 init_data.xml
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas        95 Jun  3 17:17 pilot_heartbeat.json
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas       529 Jun  3 17:17 boinc_task_state.xml
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas 197210796 Jun  3 17:17 HITS.44871837._078404.pool.root.1
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas      1033 Jun  3 17:18 memory_monitor_summary.json
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas    333831 Jun  3 17:18 log.44871837._078404.job.log.tgz.1
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas      7698 Jun  3 17:18 heartbeat.json
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas        27 Jun  3 17:18 wrapper_checkpoint.txt
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 17:18 boinc_mmap_file
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas      4353 Jun  3 17:18 pilotlog.txt
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas    717799 Jun  3 17:18 log.44871837._078404.job.log.1
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas       357 Jun  3 17:18 output.list
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas       620 Jun  3 17:18 runtime_log
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas   1075200 Jun  3 17:18 result.tar.gz
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 17:18 runtime_log.err
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas       650 Jun  3 17:18 9dZMDmwBNe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBtSKDmJoU6pm.diag
[2025-06-03 17:18:33] -rw-r--r--. 1 boincer umatlas     20762 Jun  3 17:18 stderr.txt
[2025-06-03 17:18:33] HITS file was successfully produced:
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas 197210796 Jun  3 17:17 shared/HITS.pool.root.1
[2025-06-03 17:18:33]  *** Contents of shared directory: ***
[2025-06-03 17:18:33] total 413852
[2025-06-03 17:18:33] -rw-r--r--. 2 boincer umatlas 224958450 Jun  3 15:11 ATLAS.root_0
[2025-06-03 17:18:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 15:11 start_atlas.sh
[2025-06-03 17:18:33] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 15:11 input.tar.gz
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas 197210796 Jun  3 17:17 HITS.pool.root.1
[2025-06-03 17:18:33] -rw-------. 1 boincer umatlas   1075200 Jun  3 17:18 result.tar.gz
17:18:35 (819695): run_atlas exited; CPU time 53430.969059
17:18:35 (819695): called boinc_finish(0)

</stderr_txt>
]]>

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