Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:03:57 (1006898): wrapper (7.7.26015): starting
00:03:57 (1006898): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:03:57] Arguments: --nthreads 12
[2025-06-05 00:03:57] Threads: 12
[2025-06-05 00:03:57] Checking for CVMFS
[2025-06-05 00:03:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:03:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:03:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:03:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:03:57] 2.12.7.0 29207 2604 83192 146798 1 186 2482105 4096001 7733 130560 17 34366731 99.999 662946 135 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 00:03:57] CVMFS is ok
[2025-06-05 00:03:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:03:57] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 00:03:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 00:03:57] Further information can be found at the LHC@home message board.
[2025-06-05 00:03:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:03:57] Checking for apptainer binary...
[2025-06-05 00:03:57] apptainer is not installed, using version from CVMFS
[2025-06-05 00:03:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:03:57] epyc7v12
[2025-06-05 00:03:57] apptainer works
[2025-06-05 00:03:57] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:03:57] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:03:57] Starting ATLAS job with PandaID=6677677434
[2025-06-05 00:03:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:54:53]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:54:53] 2025-06-05 01:54:21,415 | INFO     | -- intersect: -130860269014.11365
[2025-06-05 01:54:53] 2025-06-05 01:54:21,415 | INFO     | intersect: -130860269014.11365
[2025-06-05 01:54:53] 2025-06-05 01:54:21,415 | INFO     | chi2: 2.150528942044741
[2025-06-05 01:54:53] 2025-06-05 01:54:21,415 | INFO     | sum of square deviations: 338804249.9611645
[2025-06-05 01:54:53] 2025-06-05 01:54:21,416 | INFO     | sum of deviations: 27683402045.94175
[2025-06-05 01:54:53] 2025-06-05 01:54:21,416 | INFO     | mean x: 1749084988.0194175
[2025-06-05 01:54:53] 2025-06-05 01:54:21,416 | INFO     | mean y: 2557783.0291262134
[2025-06-05 01:54:53] 2025-06-05 01:54:21,416 | INFO     | -- intersect: -142913662841.16013
[2025-06-05 01:54:53] 2025-06-05 01:54:21,416 | INFO     | intersect: -142913662841.16013
[2025-06-05 01:54:53] 2025-06-05 01:54:21,416 | INFO     | chi2: 2.151514452614027
[2025-06-05 01:54:53] 2025-06-05 01:54:21,416 | INFO     | current chi2=2.151514452614027 (change=-0.04582642669988635 %)
[2025-06-05 01:54:53] 2025-06-05 01:54:21,416 | INFO     | right removable region: 102
[2025-06-05 01:54:53] 2025-06-05 01:54:21,416 | INFO     | sum of square deviations: 338803029.9611645
[2025-06-05 01:54:53] 2025-06-05 01:54:21,416 | INFO     | sum of deviations: 5105831196.805822
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | mean x: 1749085293.0194175
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | mean y: 2632486.0970873786
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | -- intersect: -26356441858.652615
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | intersect: -26356441858.652615
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | chi2: 0.03769812469577193
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | current chi2=0.03769812469577193 (change=98.2470301162314 %)
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | sum of square deviations: 291815492.4591833
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | sum of deviations: 2291772763.5408144
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | mean x: 1749085445.5204082
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | mean y: 2641421.4795918367
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | -- intersect: -13733799887.26963
[2025-06-05 01:54:53] 2025-06-05 01:54:21,417 | INFO     | intersect: -13733799887.26963
[2025-06-05 01:54:53] 2025-06-05 01:54:21,418 | INFO     | chi2: 0.0005422687842415887
[2025-06-05 01:54:53] 2025-06-05 01:54:21,418 | INFO     | current chi2=0.0005422687842415887 (change=98.56154970938805 %)
[2025-06-05 01:54:53] 2025-06-05 01:54:21,418 | INFO     | sum of square deviations: 249392400.98924753
[2025-06-05 01:54:53] 2025-06-05 01:54:21,418 | INFO     | sum of deviations: 1776095268.44086
[2025-06-05 01:54:53] 2025-06-05 01:54:21,418 | INFO     | mean x: 1749085598.0107527
[2025-06-05 01:54:53] 2025-06-05 01:54:21,418 | INFO     | mean y: 2643272.559139785
[2025-06-05 01:54:53] 2025-06-05 01:54:21,418 | INFO     | -- intersect: -12453801440.280718
[2025-06-05 01:54:53] 2025-06-05 01:54:21,418 | INFO     | intersect: -12453801440.280718
[2025-06-05 01:54:53] 2025-06-05 01:54:21,418 | INFO     | chi2: 0.000401310319822004
[2025-06-05 01:54:53] 2025-06-05 01:54:21,418 | INFO     | current chi2=0.000401310319822004 (change=25.994205920727616 %)
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | sum of square deviations: 211289055.98863629
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | sum of deviations: 1386851314.7045455
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | mean x: 1749085750.5113637
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | mean y: 2644823.2954545454
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | -- intersect: -11477939730.776922
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | intersect: -11477939730.776922
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | chi2: 0.00032385242707242833
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | current chi2=0.00032385242707242833 (change=19.301246173766753 %)
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | left removable region: 40
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | sum of square deviations: 73884695.48387094
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | sum of deviations: 318863820.2580646
[2025-06-05 01:54:53] 2025-06-05 01:54:21,419 | INFO     | mean x: 1749086177.516129
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | mean y: 2649624.7419354836
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | -- intersect: -7545873068.230642
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | intersect: -7545873068.230642
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | chi2: 0.00014073612589337296
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | -- intersect: -7545873068.230642
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | current memory leak: 4.32 B/s (using 62 data points, chi2=0.00)
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | could have reported an average CPU frequency of 2000 MHz (7 samples)
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | ..............................
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | . Timing measurements:
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | . get job = 0 s
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | . initial setup = 1 s
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | . payload setup = 7 s
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | . stage-in = 0 s
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | . payload execution = 6574 s
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | . stage-out = 0 s
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | . log creation = 0 s
[2025-06-05 01:54:53] 2025-06-05 01:54:21,420 | INFO     | ..............................
[2025-06-05 01:54:53] 2025-06-05 01:54:21,479 | INFO     | 
[2025-06-05 01:54:53] 2025-06-05 01:54:21,479 | INFO     | job summary report
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | --------------------------------------------------
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | PanDA job id: 6677677434
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | task id: 45006595
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | errors: (none)
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | pilot state: finished 
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | transexitcode: 0
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | exeerrorcode: 0
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | exeerrordiag: 
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | exitcode: 0
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | exitmsg: OK
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | cpuconsumptiontime: 40186 s
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | nevents: 400
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | neventsw: 0
[2025-06-05 01:54:53] 2025-06-05 01:54:21,480 | INFO     | pid: 1130968
[2025-06-05 01:54:53] 2025-06-05 01:54:21,481 | INFO     | pgrp: 1130968
[2025-06-05 01:54:53] 2025-06-05 01:54:21,481 | INFO     | corecount: 12
[2025-06-05 01:54:53] 2025-06-05 01:54:21,481 | INFO     | event service: False
[2025-06-05 01:54:53] 2025-06-05 01:54:21,481 | INFO     | sizes: {0: 2396855, 1: 2397735, 6: 2397997, 12: 2398025, 6585: 2425249, 6587: 2434238, 6590: 2434422, 6598: 2434616}
[2025-06-05 01:54:53] 2025-06-05 01:54:21,481 | INFO     | --------------------------------------------------
[2025-06-05 01:54:53] 2025-06-05 01:54:21,481 | INFO     | 
[2025-06-05 01:54:53] 2025-06-05 01:54:21,481 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/14
[2025-06-05 01:54:53] 2025-06-05 01:54:21,503 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,505 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:54:53] 2025-06-05 01:54:21,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,505 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:54:53] 2025-06-05 01:54:21,505 | INFO     | job 6677677434 has completed (purged errors)
[2025-06-05 01:54:53] 2025-06-05 01:54:21,505 | INFO     | overall cleanup function is called
[2025-06-05 01:54:53] 2025-06-05 01:54:22,516 | INFO     | --- collectZombieJob: --- 10, [1130968]
[2025-06-05 01:54:53] 2025-06-05 01:54:22,516 | INFO     | zombie collector waiting for pid 1130968
[2025-06-05 01:54:53] 2025-06-05 01:54:22,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:54:53] 2025-06-05 01:54:22,516 | INFO     | collected zombie processes
[2025-06-05 01:54:53] 2025-06-05 01:54:22,516 | INFO     | will attempt to kill all subprocesses of pid=1130968
[2025-06-05 01:54:53] 2025-06-05 01:54:22,781 | INFO     | process IDs to be killed: [1130968] (in reverse order)
[2025-06-05 01:54:53] 2025-06-05 01:54:22,902 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:54:53] 2025-06-05 01:54:22,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:54:53] 2025-06-05 01:54:22,914 | INFO     | did not find any defunct processes belonging to 1130968
[2025-06-05 01:54:53] 2025-06-05 01:54:22,921 | INFO     | did not find any defunct processes belonging to 1130968
[2025-06-05 01:54:53] 2025-06-05 01:54:22,921 | INFO     | ready for new job
[2025-06-05 01:54:53] 2025-06-05 01:54:22,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:54:53] 2025-06-05 01:54:22,922 | INFO     | ***************************************
[2025-06-05 01:54:53] 2025-06-05 01:54:22,922 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-05 01:54:53] 2025-06-05 01:54:22,922 | INFO     | ***************************************
[2025-06-05 01:54:53] 2025-06-05 01:54:22,923 | INFO     | 
[2025-06-05 01:54:53] 2025-06-05 01:54:22,952 | INFO     | architecture information:
[2025-06-05 01:54:53] 2025-06-05 01:54:22,953 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:54:53] 2025-06-05 01:54:22,968 | INFO     | cat /etc/os-release:
[2025-06-05 01:54:53] NAME="CentOS Linux"
[2025-06-05 01:54:53] VERSION="7 (Core)"
[2025-06-05 01:54:53] ID="centos"
[2025-06-05 01:54:53] ID_LIKE="rhel fedora"
[2025-06-05 01:54:53] VERSION_ID="7"
[2025-06-05 01:54:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:54:53] ANSI_COLOR="0;31"
[2025-06-05 01:54:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:54:53] HOME_URL="https://www.centos.org/"
[2025-06-05 01:54:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:54:53] 
[2025-06-05 01:54:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:54:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:54:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:54:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:54:53] 
[2025-06-05 01:54:53] 2025-06-05 01:54:22,968 | INFO     | ***************************************
[2025-06-05 01:54:53] 2025-06-05 01:54:23,471 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/14
[2025-06-05 01:54:53] 2025-06-05 01:54:23,489 | INFO     | sufficient remaining disk space (336768008192 B)
[2025-06-05 01:54:53] 2025-06-05 01:54:23,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:54:53] 2025-06-05 01:54:23,490 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:54:53] 2025-06-05 01:54:23,490 | INFO     | update_server=False
[2025-06-05 01:54:53] 2025-06-05 01:54:23,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:54:53] 2025-06-05 01:54:23,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:54:53] 2025-06-05 01:54:23,696 | INFO     | all job control threads have been joined
[2025-06-05 01:54:53] 2025-06-05 01:54:23,843 | INFO     | all data control threads have been joined
[2025-06-05 01:54:53] 2025-06-05 01:54:24,405 | INFO     | all payload control threads have been joined
[2025-06-05 01:54:53] 2025-06-05 01:54:24,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:54:53] 2025-06-05 01:54:24,459 | INFO     | aborting loop
[2025-06-05 01:54:53] 2025-06-05 01:54:24,495 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:24,542 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:24,580 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:24,621 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:24,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:54:53] 2025-06-05 01:54:24,702 | INFO     | [job] control thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:24,845 | INFO     | [data] control thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:25,158 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:25,409 | INFO     | [payload] control thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:25,464 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:25,520 | INFO     | [job] validate thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:25,673 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:25,836 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:25,997 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:26,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:54:53] 2025-06-05 01:54:27,493 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:28,691 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:34,007 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:54:53] 2025-06-05 01:54:35,013 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:54:53] 2025-06-05 01:54:35,933 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139893756925760)>', '<ExcThread(monitor, started 139893174949632)>']
[2025-06-05 01:54:53] 2025-06-05 01:54:40,959 | INFO     | all workflow threads have been joined
[2025-06-05 01:54:53] 2025-06-05 01:54:40,959 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:54:53] 2025-06-05 01:54:40,959 | INFO     | traces error code: 0
[2025-06-05 01:54:53] 2025-06-05 01:54:40,959 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:54:53] 2025-06-05 01:54:52,942 | INFO     | PID=1035828 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 01:54:53] 2025-06-05 01:54:52,942 | INFO     | .. there are 9 such processes running
[2025-06-05 01:54:53] 2025-06-05 01:54:52,942 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:54:53] 2025-06-05 01:54:52,942 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:54:53] 2025-06-05 01:54:52,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:54:53] 2025-06-05 01:54:52,942 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:54:53] 2025-06-05 01:54:52,942 | INFO     | [monitor] control thread has ended
[2025-06-05 01:54:53] 2025-06-05 01:54:53,030 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:54:53] 2025-06-05 01:54:53,034 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:54:53] 2025-06-05 01:54:53,038 [wrapper] pilotpid: 1035828
[2025-06-05 01:54:53] 2025-06-05 01:54:53,042 [wrapper] Pilot exit status: 0
[2025-06-05 01:54:53] 2025-06-05 01:54:53,054 [wrapper] pandaids: 6677677434
[2025-06-05 01:54:53] 2025-06-05 01:54:53,121 [wrapper] cleanup supervisor_pilot 1441024 1035831
[2025-06-05 01:54:53] 2025-06-05 01:54:53,125 [wrapper] Test setup, not cleaning
[2025-06-05 01:54:53] 2025-06-05 01:54:53,129 [wrapper] apfmon messages muted
[2025-06-05 01:54:53] 2025-06-05 01:54:53,133 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:54:53] 2025-06-05 01:54:53,136 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:54:53]  *** Error codes and diagnostics ***
[2025-06-05 01:54:53]     "exeErrorCode": 0,
[2025-06-05 01:54:53]     "exeErrorDiag": "",
[2025-06-05 01:54:53]     "pilotErrorCode": 0,
[2025-06-05 01:54:53]     "pilotErrorDiag": "",
[2025-06-05 01:54:53]  *** Listing of results directory ***
[2025-06-05 01:54:53] total 389732
[2025-06-05 01:54:53] -rw-r--r-- 1 boinc boinc    549845 Jun  2 09:40 pilot3.tar.gz
[2025-06-05 01:54:53] -rw-r--r-- 1 boinc boinc      5111 Jun  3 15:41 queuedata.json
[2025-06-05 01:54:53] -rwx------ 1 boinc boinc     37140 Jun  3 15:41 runpilot2-wrapper.sh
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc       100 Jun  5 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:54:53] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:03 run_atlas
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc       105 Jun  5 00:03 job.xml
[2025-06-05 01:54:53] -rw-r--r-- 2 boinc boinc 214836060 Jun  5 00:03 EVNT.45006593._001496.pool.root.1
[2025-06-05 01:54:53] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:03 start_atlas.sh
[2025-06-05 01:54:53] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:03 shared
[2025-06-05 01:54:53] -rw-r--r-- 2 boinc boinc    564117 Jun  5 00:03 input.tar.gz
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc      6933 Jun  5 00:03 init_data.xml
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc         0 Jun  5 00:03 boinc_lockfile
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 00:03 pandaJob.out
[2025-06-05 01:54:53] -rw------- 1 boinc boinc    987117 Jun  5 00:04 agis_schedconf.cvmfs.json
[2025-06-05 01:54:53] -rw------- 1 boinc boinc   1598969 Jun  5 00:04 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:54:53] drwx------ 6 boinc boinc      4096 Jun  5 00:04 pilot3
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc       530 Jun  5 01:53 boinc_task_state.xml
[2025-06-05 01:54:53] -rw------- 1 boinc boinc 178325202 Jun  5 01:53 HITS.45006595._037244.pool.root.1
[2025-06-05 01:54:53] -rw------- 1 boinc boinc      1033 Jun  5 01:54 memory_monitor_summary.json
[2025-06-05 01:54:53] -rw------- 1 boinc boinc    385516 Jun  5 01:54 log.45006595._037244.job.log.tgz.1
[2025-06-05 01:54:53] -rw------- 1 boinc boinc        95 Jun  5 01:54 pilot_heartbeat.json
[2025-06-05 01:54:53] -rw------- 1 boinc boinc      7653 Jun  5 01:54 heartbeat.json
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc        27 Jun  5 01:54 wrapper_checkpoint.txt
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 01:54 boinc_mmap_file
[2025-06-05 01:54:53] -rw------- 1 boinc boinc       822 Jun  5 01:54 pilotlog.txt
[2025-06-05 01:54:53] -rw------- 1 boinc boinc    605844 Jun  5 01:54 log.45006595._037244.job.log.1
[2025-06-05 01:54:53] -rw------- 1 boinc boinc       357 Jun  5 01:54 output.list
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc       620 Jun  5 01:54 runtime_log
[2025-06-05 01:54:53] -rw------- 1 boinc boinc   1013760 Jun  5 01:54 result.tar.gz
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc      8977 Jun  5 01:54 runtime_log.err
[2025-06-05 01:54:53] -rw------- 1 boinc boinc       651 Jun  5 01:54 TFvMDmWwig7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGskKDmbKXgcm.diag
[2025-06-05 01:54:53] -rw-rw-r-- 1 boinc boinc     21159 Jun  5 01:54 stderr.txt
[2025-06-05 01:54:53] HITS file was successfully produced:
[2025-06-05 01:54:53] -rw------- 1 boinc boinc 178325202 Jun  5 01:53 shared/HITS.pool.root.1
[2025-06-05 01:54:53]  *** Contents of shared directory: ***
[2025-06-05 01:54:53] total 385520
[2025-06-05 01:54:53] -rw-r--r-- 2 boinc boinc 214836060 Jun  5 00:03 ATLAS.root_0
[2025-06-05 01:54:53] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:03 start_atlas.sh
[2025-06-05 01:54:53] -rw-r--r-- 2 boinc boinc    564117 Jun  5 00:03 input.tar.gz
[2025-06-05 01:54:53] -rw------- 1 boinc boinc 178325202 Jun  5 01:53 HITS.pool.root.1
[2025-06-05 01:54:53] -rw------- 1 boinc boinc   1013760 Jun  5 01:54 result.tar.gz
01:54:54 (1006898): run_atlas exited; CPU time 40511.167593
01:54:54 (1006898): called boinc_finish(0)

</stderr_txt>
]]>

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