Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:02:47 (882193): wrapper (7.7.26015): starting
00:02:47 (882193): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:02:47] Arguments: --nthreads 12
[2025-06-05 00:02:47] Threads: 12
[2025-06-05 00:02:47] Checking for CVMFS
[2025-06-05 00:02:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:02:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:02:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:02:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:02:48] 2.12.7.0 29207 2603 82436 146798 2 58 2481141 4096001 12614 130560 17 34063574 99.999 662878 135 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 00:02:48] CVMFS is ok
[2025-06-05 00:02:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:02:48] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 00:02:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 00:02:48] Further information can be found at the LHC@home message board.
[2025-06-05 00:02:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:02:48] Checking for apptainer binary...
[2025-06-05 00:02:48] apptainer is not installed, using version from CVMFS
[2025-06-05 00:02:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:02:48] epyc7v12
[2025-06-05 00:02:48] apptainer works
[2025-06-05 00:02:48] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:02:48] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:02:48] Starting ATLAS job with PandaID=6677864141
[2025-06-05 00:02:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:53:26]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:53:26] 2025-06-05 01:53:12,643 | INFO     | using path: /opt/boinc/instance_homes/boinc_31419/slots/3/PanDA_Pilot-6677864141/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:53:26] 2025-06-05 01:53:12,644 | INFO     | extracted standard info from prmon json
[2025-06-05 01:53:26] 2025-06-05 01:53:12,644 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:53:26] 2025-06-05 01:53:12,644 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:53:26] 2025-06-05 01:53:12,644 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:53:26] 2025-06-05 01:53:12,644 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:53:26] 2025-06-05 01:53:12,647 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:53:26] 2025-06-05 01:53:12,647 | INFO     | sum of square deviations: 390566350.8518512
[2025-06-05 01:53:26] 2025-06-05 01:53:12,647 | INFO     | sum of deviations: 17356393292.537033
[2025-06-05 01:53:26] 2025-06-05 01:53:12,648 | INFO     | mean x: 1749085070.5370371
[2025-06-05 01:53:26] 2025-06-05 01:53:12,648 | INFO     | mean y: 2598132.9907407407
[2025-06-05 01:53:26] 2025-06-05 01:53:12,648 | INFO     | -- intersect: -77725061508.27966
[2025-06-05 01:53:26] 2025-06-05 01:53:12,648 | INFO     | intersect: -77725061508.27966
[2025-06-05 01:53:26] 2025-06-05 01:53:12,648 | INFO     | chi2: 1.276449045545492
[2025-06-05 01:53:26] 2025-06-05 01:53:12,648 | INFO     | sum of square deviations: 338789855.84465957
[2025-06-05 01:53:26] 2025-06-05 01:53:12,649 | INFO     | sum of deviations: 16472878029.834953
[2025-06-05 01:53:26] 2025-06-05 01:53:12,649 | INFO     | mean x: 1749084918.038835
[2025-06-05 01:53:26] 2025-06-05 01:53:12,649 | INFO     | mean y: 2595529.291262136
[2025-06-05 01:53:26] 2025-06-05 01:53:12,649 | INFO     | -- intersect: -85042638327.67688
[2025-06-05 01:53:26] 2025-06-05 01:53:12,649 | INFO     | intersect: -85042638327.67688
[2025-06-05 01:53:26] 2025-06-05 01:53:12,649 | INFO     | chi2: 1.2775486373415106
[2025-06-05 01:53:26] 2025-06-05 01:53:12,650 | INFO     | current chi2=1.2775486373415106 (change=-0.08614458993532981 %)
[2025-06-05 01:53:26] 2025-06-05 01:53:12,650 | INFO     | right removable region: 102
[2025-06-05 01:53:26] 2025-06-05 01:53:12,650 | INFO     | sum of square deviations: 338787415.84465957
[2025-06-05 01:53:26] 2025-06-05 01:53:12,650 | INFO     | sum of deviations: 1598167099.4466016
[2025-06-05 01:53:26] 2025-06-05 01:53:12,650 | INFO     | mean x: 1749085223.038835
[2025-06-05 01:53:26] 2025-06-05 01:53:12,650 | INFO     | mean y: 2643569.3883495145
[2025-06-05 01:53:26] 2025-06-05 01:53:12,651 | INFO     | -- intersect: -8248343116.819025
[2025-06-05 01:53:26] 2025-06-05 01:53:12,651 | INFO     | intersect: -8248343116.819025
[2025-06-05 01:53:26] 2025-06-05 01:53:12,651 | INFO     | chi2: 0.0007757250701652831
[2025-06-05 01:53:26] 2025-06-05 01:53:12,651 | INFO     | current chi2=0.0007757250701652831 (change=99.93922788591739 %)
[2025-06-05 01:53:26] 2025-06-05 01:53:12,651 | INFO     | sum of square deviations: 291799268.3367351
[2025-06-05 01:53:26] 2025-06-05 01:53:12,652 | INFO     | sum of deviations: 1129652299.8469386
[2025-06-05 01:53:26] 2025-06-05 01:53:12,652 | INFO     | mean x: 1749085375.5408163
[2025-06-05 01:53:26] 2025-06-05 01:53:12,652 | INFO     | mean y: 2645063.663265306
[2025-06-05 01:53:26] 2025-06-05 01:53:12,652 | INFO     | -- intersect: -6768647847.284672
[2025-06-05 01:53:26] 2025-06-05 01:53:12,652 | INFO     | intersect: -6768647847.284672
[2025-06-05 01:53:26] 2025-06-05 01:53:12,652 | INFO     | chi2: 0.0002669957247136043
[2025-06-05 01:53:26] 2025-06-05 01:53:12,652 | INFO     | current chi2=0.0002669957247136043 (change=65.58114015101823 %)
[2025-06-05 01:53:26] 2025-06-05 01:53:12,652 | INFO     | sum of square deviations: 249381543.9569894
[2025-06-05 01:53:26] 2025-06-05 01:53:12,653 | INFO     | sum of deviations: 1058148914.5268815
[2025-06-05 01:53:26] 2025-06-05 01:53:12,653 | INFO     | mean x: 1749085528.0215054
[2025-06-05 01:53:26] 2025-06-05 01:53:12,653 | INFO     | mean y: 2645323.2365591396
[2025-06-05 01:53:26] 2025-06-05 01:53:12,653 | INFO     | -- intersect: -7418886052.035694
[2025-06-05 01:53:26] 2025-06-05 01:53:12,653 | INFO     | intersect: -7418886052.035694
[2025-06-05 01:53:26] 2025-06-05 01:53:12,653 | INFO     | chi2: 0.00021141510910940254
[2025-06-05 01:53:26] 2025-06-05 01:53:12,653 | INFO     | current chi2=0.00021141510910940254 (change=20.81704329304182 %)
[2025-06-05 01:53:26] 2025-06-05 01:53:12,653 | INFO     | left removable region: 30
[2025-06-05 01:53:26] 2025-06-05 01:53:12,654 | INFO     | sum of square deviations: 115713401.9861112
[2025-06-05 01:53:26] 2025-06-05 01:53:12,654 | INFO     | sum of deviations: 339305482.95833343
[2025-06-05 01:53:26] 2025-06-05 01:53:12,654 | INFO     | mean x: 1749085802.5138888
[2025-06-05 01:53:26] 2025-06-05 01:53:12,654 | INFO     | mean y: 2648018.5416666665
[2025-06-05 01:53:26] 2025-06-05 01:53:12,654 | INFO     | -- intersect: -5126182287.8110285
[2025-06-05 01:53:26] 2025-06-05 01:53:12,654 | INFO     | intersect: -5126182287.8110285
[2025-06-05 01:53:26] 2025-06-05 01:53:12,654 | INFO     | chi2: 6.265808867991008e-05
[2025-06-05 01:53:26] 2025-06-05 01:53:12,655 | INFO     | -- intersect: -5126182287.8110285
[2025-06-05 01:53:26] 2025-06-05 01:53:12,655 | INFO     | current memory leak: 2.93 B/s (using 72 data points, chi2=0.00)
[2025-06-05 01:53:26] 2025-06-05 01:53:12,655 | INFO     | ..............................
[2025-06-05 01:53:26] 2025-06-05 01:53:12,655 | INFO     | . Timing measurements:
[2025-06-05 01:53:26] 2025-06-05 01:53:12,655 | INFO     | . get job = 0 s
[2025-06-05 01:53:26] 2025-06-05 01:53:12,655 | INFO     | . initial setup = 1 s
[2025-06-05 01:53:26] 2025-06-05 01:53:12,655 | INFO     | . payload setup = 7 s
[2025-06-05 01:53:26] 2025-06-05 01:53:12,655 | INFO     | . stage-in = 0 s
[2025-06-05 01:53:26] 2025-06-05 01:53:12,655 | INFO     | . payload execution = 6578 s
[2025-06-05 01:53:26] 2025-06-05 01:53:12,656 | INFO     | . stage-out = 0 s
[2025-06-05 01:53:26] 2025-06-05 01:53:12,656 | INFO     | . log creation = 0 s
[2025-06-05 01:53:26] 2025-06-05 01:53:12,656 | INFO     | ..............................
[2025-06-05 01:53:26] 2025-06-05 01:53:12,758 | INFO     | 
[2025-06-05 01:53:26] 2025-06-05 01:53:12,758 | INFO     | job summary report
[2025-06-05 01:53:26] 2025-06-05 01:53:12,758 | INFO     | --------------------------------------------------
[2025-06-05 01:53:26] 2025-06-05 01:53:12,758 | INFO     | PanDA job id: 6677864141
[2025-06-05 01:53:26] 2025-06-05 01:53:12,758 | INFO     | task id: 45006595
[2025-06-05 01:53:26] 2025-06-05 01:53:12,758 | INFO     | errors: (none)
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | pilot state: finished 
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | transexitcode: 0
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | exeerrorcode: 0
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | exeerrordiag: 
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | exitcode: 0
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | exitmsg: OK
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | cpuconsumptiontime: 40359 s
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | nevents: 400
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | neventsw: 0
[2025-06-05 01:53:26] 2025-06-05 01:53:12,759 | INFO     | pid: 938320
[2025-06-05 01:53:26] 2025-06-05 01:53:12,760 | INFO     | pgrp: 938320
[2025-06-05 01:53:26] 2025-06-05 01:53:12,760 | INFO     | corecount: 12
[2025-06-05 01:53:26] 2025-06-05 01:53:12,760 | INFO     | event service: False
[2025-06-05 01:53:26] 2025-06-05 01:53:12,760 | INFO     | sizes: {0: 2397365, 5: 2397571, 11: 2397627, 6589: 2424670, 6590: 2424669, 6591: 2433896, 6598: 2434010}
[2025-06-05 01:53:26] 2025-06-05 01:53:12,760 | INFO     | --------------------------------------------------
[2025-06-05 01:53:26] 2025-06-05 01:53:12,760 | INFO     | 
[2025-06-05 01:53:26] 2025-06-05 01:53:12,760 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/3
[2025-06-05 01:53:26] 2025-06-05 01:53:12,784 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,785 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,786 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:53:26] 2025-06-05 01:53:12,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:53:26] 2025-06-05 01:53:12,787 | INFO     | job 6677864141 has completed (purged errors)
[2025-06-05 01:53:26] 2025-06-05 01:53:12,787 | INFO     | overall cleanup function is called
[2025-06-05 01:53:26] 2025-06-05 01:53:13,793 | INFO     | --- collectZombieJob: --- 10, [938320]
[2025-06-05 01:53:26] 2025-06-05 01:53:13,794 | INFO     | zombie collector waiting for pid 938320
[2025-06-05 01:53:26] 2025-06-05 01:53:13,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:53:26] 2025-06-05 01:53:13,794 | INFO     | collected zombie processes
[2025-06-05 01:53:26] 2025-06-05 01:53:13,794 | INFO     | will attempt to kill all subprocesses of pid=938320
[2025-06-05 01:53:26] 2025-06-05 01:53:14,296 | INFO     | process IDs to be killed: [938320] (in reverse order)
[2025-06-05 01:53:26] 2025-06-05 01:53:14,463 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:53:26] 2025-06-05 01:53:14,463 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:53:26] 2025-06-05 01:53:14,479 | INFO     | did not find any defunct processes belonging to 938320
[2025-06-05 01:53:26] 2025-06-05 01:53:14,493 | INFO     | did not find any defunct processes belonging to 938320
[2025-06-05 01:53:26] 2025-06-05 01:53:14,494 | INFO     | ready for new job
[2025-06-05 01:53:26] 2025-06-05 01:53:14,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:53:26] 2025-06-05 01:53:14,496 | INFO     | **************************************
[2025-06-05 01:53:26] 2025-06-05 01:53:14,496 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:53:26] 2025-06-05 01:53:14,496 | INFO     | **************************************
[2025-06-05 01:53:26] 2025-06-05 01:53:14,496 | INFO     | 
[2025-06-05 01:53:26] 2025-06-05 01:53:14,523 | INFO     | architecture information:
[2025-06-05 01:53:26] 2025-06-05 01:53:14,523 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:53:26] 2025-06-05 01:53:14,541 | INFO     | cat /etc/os-release:
[2025-06-05 01:53:26] NAME="CentOS Linux"
[2025-06-05 01:53:26] VERSION="7 (Core)"
[2025-06-05 01:53:26] ID="centos"
[2025-06-05 01:53:26] ID_LIKE="rhel fedora"
[2025-06-05 01:53:26] VERSION_ID="7"
[2025-06-05 01:53:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:53:26] ANSI_COLOR="0;31"
[2025-06-05 01:53:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:53:26] HOME_URL="https://www.centos.org/"
[2025-06-05 01:53:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:53:26] 
[2025-06-05 01:53:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:53:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:53:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:53:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:53:26] 
[2025-06-05 01:53:26] 2025-06-05 01:53:14,542 | INFO     | **************************************
[2025-06-05 01:53:26] 2025-06-05 01:53:15,045 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/3
[2025-06-05 01:53:26] 2025-06-05 01:53:15,063 | INFO     | sufficient remaining disk space (336126279680 B)
[2025-06-05 01:53:26] 2025-06-05 01:53:15,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:53:26] 2025-06-05 01:53:15,063 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:53:26] 2025-06-05 01:53:15,063 | INFO     | update_server=False
[2025-06-05 01:53:26] 2025-06-05 01:53:15,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:53:26] 2025-06-05 01:53:15,064 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:53:26] 2025-06-05 01:53:15,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:53:26] 2025-06-05 01:53:15,064 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:53:26] 2025-06-05 01:53:15,064 | INFO     | aborting loop
[2025-06-05 01:53:26] 2025-06-05 01:53:15,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:53:26] 2025-06-05 01:53:15,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:53:26] 2025-06-05 01:53:15,589 | INFO     | all job control threads have been joined
[2025-06-05 01:53:26] 2025-06-05 01:53:15,591 | INFO     | all payload control threads have been joined
[2025-06-05 01:53:26] 2025-06-05 01:53:15,809 | INFO     | all data control threads have been joined
[2025-06-05 01:53:26] 2025-06-05 01:53:16,066 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:16,069 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:16,214 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:16,274 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:16,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:53:26] 2025-06-05 01:53:16,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:53:26] 2025-06-05 01:53:16,593 | INFO     | [payload] control thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:16,595 | INFO     | [job] control thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:16,815 | INFO     | [data] control thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:16,815 | INFO     | [job] validate thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:16,818 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:16,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:17,118 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:17,381 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:17,435 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:17,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:53:26] 2025-06-05 01:53:18,372 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:18,772 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:20,469 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:53:26] 2025-06-05 01:53:21,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748165461824)>', '<ExcThread(monitor, started 139747867473664)>']
[2025-06-05 01:53:26] 2025-06-05 01:53:22,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:53:26] 2025-06-05 01:53:22,095 | INFO     | [monitor] control thread has ended
[2025-06-05 01:53:26] 2025-06-05 01:53:26,117 | INFO     | all workflow threads have been joined
[2025-06-05 01:53:26] 2025-06-05 01:53:26,118 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:53:26] 2025-06-05 01:53:26,118 | INFO     | traces error code: 0
[2025-06-05 01:53:26] 2025-06-05 01:53:26,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:53:26] 2025-06-05 01:53:26,249 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:53:26] 2025-06-05 01:53:26,252 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:53:26] 2025-06-05 01:53:26,255 [wrapper] pilotpid: 891758
[2025-06-05 01:53:26] 2025-06-05 01:53:26,258 [wrapper] Pilot exit status: 0
[2025-06-05 01:53:26] 2025-06-05 01:53:26,269 [wrapper] pandaids: 6677864141
[2025-06-05 01:53:26] 2025-06-05 01:53:26,371 [wrapper] cleanup supervisor_pilot 1440741 891759
[2025-06-05 01:53:26] 2025-06-05 01:53:26,375 [wrapper] Test setup, not cleaning
[2025-06-05 01:53:26] 2025-06-05 01:53:26,378 [wrapper] apfmon messages muted
[2025-06-05 01:53:26] 2025-06-05 01:53:26,381 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:53:26] 2025-06-05 01:53:26,384 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:53:26]  *** Error codes and diagnostics ***
[2025-06-05 01:53:26]     "exeErrorCode": 0,
[2025-06-05 01:53:26]     "exeErrorDiag": "",
[2025-06-05 01:53:26]     "pilotErrorCode": 0,
[2025-06-05 01:53:26]     "pilotErrorDiag": "",
[2025-06-05 01:53:26]  *** Listing of results directory ***
[2025-06-05 01:53:26] total 387352
[2025-06-05 01:53:26] -rw-r--r-- 1 boinc boinc    495897 Jun  3 17:46 pilot3.tar.gz
[2025-06-05 01:53:26] -rwx------ 1 boinc boinc     37140 Jun  3 17:50 runpilot2-wrapper.sh
[2025-06-05 01:53:26] -rw-r--r-- 1 boinc boinc      5111 Jun  3 17:50 queuedata.json
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc       100 Jun  5 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:53:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:02 run_atlas
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc       105 Jun  5 00:02 job.xml
[2025-06-05 01:53:26] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:02 start_atlas.sh
[2025-06-05 01:53:26] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:02 shared
[2025-06-05 01:53:26] -rw-r--r-- 2 boinc boinc    508880 Jun  5 00:02 input.tar.gz
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc      6932 Jun  5 00:02 init_data.xml
[2025-06-05 01:53:26] -rw-r--r-- 2 boinc boinc 212981979 Jun  5 00:02 EVNT.45006593._001640.pool.root.1
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc         0 Jun  5 00:02 boinc_lockfile
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 00:02 pandaJob.out
[2025-06-05 01:53:26] -rw------- 1 boinc boinc    987117 Jun  5 00:02 agis_schedconf.cvmfs.json
[2025-06-05 01:53:26] -rw------- 1 boinc boinc   1598969 Jun  5 00:02 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:53:26] drwx------ 4 boinc boinc      4096 Jun  5 00:02 pilot3
[2025-06-05 01:53:26] -rw------- 1 boinc boinc        95 Jun  5 01:52 pilot_heartbeat.json
[2025-06-05 01:53:26] -rw------- 1 boinc boinc 177910025 Jun  5 01:52 HITS.45006595._040922.pool.root.1
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc       530 Jun  5 01:52 boinc_task_state.xml
[2025-06-05 01:53:26] -rw------- 1 boinc boinc      1034 Jun  5 01:53 memory_monitor_summary.json
[2025-06-05 01:53:26] -rw------- 1 boinc boinc    369832 Jun  5 01:53 log.45006595._040922.job.log.tgz.1
[2025-06-05 01:53:26] -rw------- 1 boinc boinc      7643 Jun  5 01:53 heartbeat.json
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 01:53 boinc_mmap_file
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc        27 Jun  5 01:53 wrapper_checkpoint.txt
[2025-06-05 01:53:26] -rw------- 1 boinc boinc      4500 Jun  5 01:53 pilotlog.txt
[2025-06-05 01:53:26] -rw------- 1 boinc boinc    589588 Jun  5 01:53 log.45006595._040922.job.log.1
[2025-06-05 01:53:26] -rw------- 1 boinc boinc       357 Jun  5 01:53 output.list
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc       620 Jun  5 01:53 runtime_log
[2025-06-05 01:53:26] -rw------- 1 boinc boinc    983040 Jun  5 01:53 result.tar.gz
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc      8963 Jun  5 01:53 runtime_log.err
[2025-06-05 01:53:26] -rw------- 1 boinc boinc       651 Jun  5 01:53 lOmNDmJxkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0RlKDmsbXb8m.diag
[2025-06-05 01:53:26] -rw-rw-r-- 1 boinc boinc     21119 Jun  5 01:53 stderr.txt
[2025-06-05 01:53:26] HITS file was successfully produced:
[2025-06-05 01:53:26] -rw------- 1 boinc boinc 177910025 Jun  5 01:52 shared/HITS.pool.root.1
[2025-06-05 01:53:26]  *** Contents of shared directory: ***
[2025-06-05 01:53:26] total 383220
[2025-06-05 01:53:26] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:02 start_atlas.sh
[2025-06-05 01:53:26] -rw-r--r-- 2 boinc boinc    508880 Jun  5 00:02 input.tar.gz
[2025-06-05 01:53:26] -rw-r--r-- 2 boinc boinc 212981979 Jun  5 00:02 ATLAS.root_0
[2025-06-05 01:53:26] -rw------- 1 boinc boinc 177910025 Jun  5 01:52 HITS.pool.root.1
[2025-06-05 01:53:26] -rw------- 1 boinc boinc    983040 Jun  5 01:53 result.tar.gz
01:53:28 (882193): run_atlas exited; CPU time 40681.392110
01:53:28 (882193): called boinc_finish(0)

</stderr_txt>
]]>

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