Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:05:11 (1223868): wrapper (7.7.26015): starting
00:05:11 (1223868): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:05:11] Arguments: --nthreads 12
[2025-06-05 00:05:11] Threads: 12
[2025-06-05 00:05:11] Checking for CVMFS
[2025-06-05 00:05:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:05:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:05:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:05:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:05:12] 2.12.7.0 29207 2605 83600 146798 0 187 2482105 4096001 12488 130560 17 34895538 99.999 662946 135 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 00:05:12] CVMFS is ok
[2025-06-05 00:05:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:05:12] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 00:05:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 00:05:12] Further information can be found at the LHC@home message board.
[2025-06-05 00:05:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:05:12] Checking for apptainer binary...
[2025-06-05 00:05:12] apptainer is not installed, using version from CVMFS
[2025-06-05 00:05:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:05:12] epyc7v12
[2025-06-05 00:05:12] apptainer works
[2025-06-05 00:05:12] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:05:12] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:05:12] Starting ATLAS job with PandaID=6677782188
[2025-06-05 00:05:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:56:09]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:56:09] 2025-06-05 01:55:53,063 | INFO     | extracted standard info from prmon json
[2025-06-05 01:56:09] 2025-06-05 01:55:53,063 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:56:09] 2025-06-05 01:55:53,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:56:09] 2025-06-05 01:55:53,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:56:09] 2025-06-05 01:55:53,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:56:09] 2025-06-05 01:55:53,066 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:56:09] 2025-06-05 01:55:53,067 | INFO     | sum of square deviations: 401533110.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,067 | INFO     | sum of deviations: 12232331037.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,067 | INFO     | mean x: 1749085246.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,068 | INFO     | mean y: 2568054.2752293576
[2025-06-05 01:56:09] 2025-06-05 01:55:53,068 | INFO     | -- intersect: -53281679765.29955
[2025-06-05 01:56:09] 2025-06-05 01:55:53,068 | INFO     | intersect: -53281679765.29955
[2025-06-05 01:56:09] 2025-06-05 01:55:53,068 | INFO     | chi2: 2.37765483248008
[2025-06-05 01:56:09] 2025-06-05 01:55:53,068 | INFO     | sum of square deviations: 348769330.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,069 | INFO     | sum of deviations: 19851514839.500004
[2025-06-05 01:56:09] 2025-06-05 01:55:53,069 | INFO     | mean x: 1749085093.5
[2025-06-05 01:56:09] 2025-06-05 01:55:53,069 | INFO     | mean y: 2589154.548076923
[2025-06-05 01:56:09] 2025-06-05 01:55:53,069 | INFO     | -- intersect: -99553150706.99164
[2025-06-05 01:56:09] 2025-06-05 01:55:53,069 | INFO     | intersect: -99553150706.99164
[2025-06-05 01:56:09] 2025-06-05 01:55:53,070 | INFO     | chi2: 1.3820202597256757
[2025-06-05 01:56:09] 2025-06-05 01:55:53,070 | INFO     | current chi2=1.3820202597256757 (change=41.87464720082518 %)
[2025-06-05 01:56:09] 2025-06-05 01:55:53,070 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,070 | INFO     | sum of deviations: 18760234447.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,071 | INFO     | mean x: 1749084941.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,071 | INFO     | mean y: 2585679.797979798
[2025-06-05 01:56:09] 2025-06-05 01:55:53,071 | INFO     | -- intersect: -109068457759.91536
[2025-06-05 01:56:09] 2025-06-05 01:55:53,071 | INFO     | intersect: -109068457759.91536
[2025-06-05 01:56:09] 2025-06-05 01:55:53,071 | INFO     | chi2: 1.3824090893319396
[2025-06-05 01:56:09] 2025-06-05 01:55:53,071 | INFO     | current chi2=1.3824090893319396 (change=-0.02813487020379453 %)
[2025-06-05 01:56:09] 2025-06-05 01:55:53,071 | INFO     | right removable region: 98
[2025-06-05 01:56:09] 2025-06-05 01:55:53,071 | INFO     | sum of square deviations: 348769330.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,072 | INFO     | sum of deviations: -5507148320.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,072 | INFO     | mean x: 1749085398.5
[2025-06-05 01:56:09] 2025-06-05 01:55:53,072 | INFO     | mean y: 2618489.7884615385
[2025-06-05 01:56:09] 2025-06-05 01:55:53,072 | INFO     | -- intersect: 27621081139.25883
[2025-06-05 01:56:09] 2025-06-05 01:55:53,072 | INFO     | intersect: 27621081139.25883
[2025-06-05 01:56:09] 2025-06-05 01:55:53,072 | INFO     | chi2: 1.040010445705278
[2025-06-05 01:56:09] 2025-06-05 01:55:53,072 | INFO     | current chi2=1.040010445705278 (change=56.258981265986975 %)
[2025-06-05 01:56:09] 2025-06-05 01:55:53,073 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,073 | INFO     | sum of deviations: -5981618886.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,073 | INFO     | mean x: 1749085551.0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,073 | INFO     | mean y: 2619971.101010101
[2025-06-05 01:56:09] 2025-06-05 01:55:53,073 | INFO     | -- intersect: 34779458327.37678
[2025-06-05 01:56:09] 2025-06-05 01:55:53,073 | INFO     | intersect: 34779458327.37678
[2025-06-05 01:56:09] 2025-06-05 01:55:53,073 | INFO     | chi2: 1.04081568798846
[2025-06-05 01:56:09] 2025-06-05 01:55:53,074 | INFO     | current chi2=1.04081568798846 (change=-0.07742636494733061 %)
[2025-06-05 01:56:09] 2025-06-05 01:55:53,074 | INFO     | left removable region: 20
[2025-06-05 01:56:09] 2025-06-05 01:55:53,074 | INFO     | sum of square deviations: 147126479.5
[2025-06-05 01:56:09] 2025-06-05 01:55:53,074 | INFO     | sum of deviations: 821623151.9999999
[2025-06-05 01:56:09] 2025-06-05 01:55:53,074 | INFO     | mean x: 1749085520.5
[2025-06-05 01:56:09] 2025-06-05 01:55:53,074 | INFO     | mean y: 2648715.487179487
[2025-06-05 01:56:09] 2025-06-05 01:55:53,074 | INFO     | -- intersect: -9765063822.42324
[2025-06-05 01:56:09] 2025-06-05 01:55:53,074 | INFO     | intersect: -9765063822.42324
[2025-06-05 01:56:09] 2025-06-05 01:55:53,075 | INFO     | chi2: 7.837963022513266e-05
[2025-06-05 01:56:09] 2025-06-05 01:55:53,075 | INFO     | -- intersect: -9765063822.42324
[2025-06-05 01:56:09] 2025-06-05 01:55:53,075 | INFO     | current memory leak: 5.58 B/s (using 78 data points, chi2=0.00)
[2025-06-05 01:56:09] 2025-06-05 01:55:53,075 | INFO     | ..............................
[2025-06-05 01:56:09] 2025-06-05 01:55:53,075 | INFO     | . Timing measurements:
[2025-06-05 01:56:09] 2025-06-05 01:55:53,075 | INFO     | . get job = 0 s
[2025-06-05 01:56:09] 2025-06-05 01:55:53,075 | INFO     | . initial setup = 1 s
[2025-06-05 01:56:09] 2025-06-05 01:55:53,075 | INFO     | . payload setup = 7 s
[2025-06-05 01:56:09] 2025-06-05 01:55:53,075 | INFO     | . stage-in = 0 s
[2025-06-05 01:56:09] 2025-06-05 01:55:53,076 | INFO     | . payload execution = 6593 s
[2025-06-05 01:56:09] 2025-06-05 01:55:53,076 | INFO     | . stage-out = 0 s
[2025-06-05 01:56:09] 2025-06-05 01:55:53,076 | INFO     | . log creation = 0 s
[2025-06-05 01:56:09] 2025-06-05 01:55:53,076 | INFO     | ..............................
[2025-06-05 01:56:09] 2025-06-05 01:55:53,133 | INFO     | 
[2025-06-05 01:56:09] 2025-06-05 01:55:53,133 | INFO     | job summary report
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | --------------------------------------------------
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | PanDA job id: 6677782188
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | task id: 45006595
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | errors: (none)
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | pilot state: finished 
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | transexitcode: 0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | exeerrorcode: 0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | exeerrordiag: 
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | exitcode: 0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,134 | INFO     | exitmsg: OK
[2025-06-05 01:56:09] 2025-06-05 01:55:53,135 | INFO     | cpuconsumptiontime: 40559 s
[2025-06-05 01:56:09] 2025-06-05 01:55:53,135 | INFO     | nevents: 400
[2025-06-05 01:56:09] 2025-06-05 01:55:53,135 | INFO     | neventsw: 0
[2025-06-05 01:56:09] 2025-06-05 01:55:53,135 | INFO     | pid: 1267363
[2025-06-05 01:56:09] 2025-06-05 01:55:53,135 | INFO     | pgrp: 1267363
[2025-06-05 01:56:09] 2025-06-05 01:55:53,135 | INFO     | corecount: 12
[2025-06-05 01:56:09] 2025-06-05 01:55:53,135 | INFO     | event service: False
[2025-06-05 01:56:09] 2025-06-05 01:55:53,135 | INFO     | sizes: {0: 2397139, 1: 2397394, 6: 2397600, 11: 2397628, 6604: 2424700, 6606: 2433689, 6608: 2433873, 6613: 2434043}
[2025-06-05 01:56:09] 2025-06-05 01:55:53,135 | INFO     | --------------------------------------------------
[2025-06-05 01:56:09] 2025-06-05 01:55:53,135 | INFO     | 
[2025-06-05 01:56:09] 2025-06-05 01:55:53,136 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/10
[2025-06-05 01:56:09] 2025-06-05 01:55:53,161 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,161 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,162 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,162 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,162 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,162 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,162 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,162 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,162 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,162 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,163 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:56:09] 2025-06-05 01:55:53,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,163 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:56:09] 2025-06-05 01:55:53,163 | INFO     | job 6677782188 has completed (purged errors)
[2025-06-05 01:56:09] 2025-06-05 01:55:53,164 | INFO     | overall cleanup function is called
[2025-06-05 01:56:09] 2025-06-05 01:55:53,655 | INFO     | PID=1234946 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 01:56:09] 2025-06-05 01:55:53,656 | INFO     | .. there are 3 such processes running
[2025-06-05 01:56:09] 2025-06-05 01:55:54,174 | INFO     | --- collectZombieJob: --- 10, [1267363]
[2025-06-05 01:56:09] 2025-06-05 01:55:54,174 | INFO     | zombie collector waiting for pid 1267363
[2025-06-05 01:56:09] 2025-06-05 01:55:54,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:56:09] 2025-06-05 01:55:54,174 | INFO     | collected zombie processes
[2025-06-05 01:56:09] 2025-06-05 01:55:54,174 | INFO     | will attempt to kill all subprocesses of pid=1267363
[2025-06-05 01:56:09] 2025-06-05 01:55:54,387 | INFO     | process IDs to be killed: [1267363] (in reverse order)
[2025-06-05 01:56:09] 2025-06-05 01:55:54,488 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:56:09] 2025-06-05 01:55:54,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:56:09] 2025-06-05 01:55:54,501 | INFO     | did not find any defunct processes belonging to 1267363
[2025-06-05 01:56:09] 2025-06-05 01:55:54,507 | INFO     | did not find any defunct processes belonging to 1267363
[2025-06-05 01:56:09] 2025-06-05 01:55:54,507 | INFO     | ready for new job
[2025-06-05 01:56:09] 2025-06-05 01:55:54,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:56:09] 2025-06-05 01:55:54,508 | INFO     | **************************************
[2025-06-05 01:56:09] 2025-06-05 01:55:54,508 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:56:09] 2025-06-05 01:55:54,508 | INFO     | **************************************
[2025-06-05 01:56:09] 2025-06-05 01:55:54,508 | INFO     | 
[2025-06-05 01:56:09] 2025-06-05 01:55:54,536 | INFO     | architecture information:
[2025-06-05 01:56:09] 2025-06-05 01:55:54,536 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:56:09] 2025-06-05 01:55:54,555 | INFO     | cat /etc/os-release:
[2025-06-05 01:56:09] NAME="CentOS Linux"
[2025-06-05 01:56:09] VERSION="7 (Core)"
[2025-06-05 01:56:09] ID="centos"
[2025-06-05 01:56:09] ID_LIKE="rhel fedora"
[2025-06-05 01:56:09] VERSION_ID="7"
[2025-06-05 01:56:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:56:09] ANSI_COLOR="0;31"
[2025-06-05 01:56:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:56:09] HOME_URL="https://www.centos.org/"
[2025-06-05 01:56:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:56:09] 
[2025-06-05 01:56:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:56:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:56:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:56:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:56:09] 
[2025-06-05 01:56:09] 2025-06-05 01:55:54,556 | INFO     | **************************************
[2025-06-05 01:56:09] 2025-06-05 01:55:55,059 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/10
[2025-06-05 01:56:09] 2025-06-05 01:55:55,076 | INFO     | sufficient remaining disk space (338986795008 B)
[2025-06-05 01:56:09] 2025-06-05 01:55:55,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:56:09] 2025-06-05 01:55:55,077 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:56:09] 2025-06-05 01:55:55,077 | INFO     | update_server=False
[2025-06-05 01:56:09] 2025-06-05 01:55:55,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:56:09] 2025-06-05 01:55:55,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:56:09] 2025-06-05 01:55:55,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:56:09] 2025-06-05 01:55:55,078 | INFO     | aborting loop
[2025-06-05 01:56:09] 2025-06-05 01:55:55,624 | INFO     | all job control threads have been joined
[2025-06-05 01:56:09] 2025-06-05 01:55:55,661 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:56:09] 2025-06-05 01:55:55,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:56:09] 2025-06-05 01:55:55,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:56:09] 2025-06-05 01:55:55,708 | INFO     | all payload control threads have been joined
[2025-06-05 01:56:09] 2025-06-05 01:55:55,971 | INFO     | all data control threads have been joined
[2025-06-05 01:56:09] 2025-06-05 01:55:56,083 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:56,083 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:56,084 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:56,174 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:56,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:56:09] 2025-06-05 01:55:56,629 | INFO     | [job] control thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:56,699 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:56,713 | INFO     | [payload] control thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:56,890 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:56,902 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:56,976 | INFO     | [data] control thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:57,114 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:57,129 | INFO     | [job] validate thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:57,195 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:57,585 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:55:58,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:56:09] 2025-06-05 01:55:58,391 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:56:02,168 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:56:09] 2025-06-05 01:56:03,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831881230144)>', '<ExcThread(monitor, started 139831662585600)>']
[2025-06-05 01:56:09] 2025-06-05 01:56:04,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:56:09] 2025-06-05 01:56:04,707 | INFO     | [monitor] control thread has ended
[2025-06-05 01:56:09] 2025-06-05 01:56:08,848 | INFO     | all workflow threads have been joined
[2025-06-05 01:56:09] 2025-06-05 01:56:08,848 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:56:09] 2025-06-05 01:56:08,848 | INFO     | traces error code: 0
[2025-06-05 01:56:09] 2025-06-05 01:56:08,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:56:09] 2025-06-05 01:56:08,928 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:56:09] 2025-06-05 01:56:08,933 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:56:09] 2025-06-05 01:56:08,936 [wrapper] pilotpid: 1234946
[2025-06-05 01:56:09] 2025-06-05 01:56:08,940 [wrapper] Pilot exit status: 0
[2025-06-05 01:56:09] 2025-06-05 01:56:08,952 [wrapper] pandaids: 6677782188
[2025-06-05 01:56:09] 2025-06-05 01:56:09,020 [wrapper] cleanup supervisor_pilot 1445320 1234947
[2025-06-05 01:56:09] 2025-06-05 01:56:09,024 [wrapper] Test setup, not cleaning
[2025-06-05 01:56:09] 2025-06-05 01:56:09,028 [wrapper] apfmon messages muted
[2025-06-05 01:56:09] 2025-06-05 01:56:09,032 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:56:09] 2025-06-05 01:56:09,036 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:56:09]  *** Error codes and diagnostics ***
[2025-06-05 01:56:09]     "exeErrorCode": 0,
[2025-06-05 01:56:09]     "exeErrorDiag": "",
[2025-06-05 01:56:09]     "pilotErrorCode": 0,
[2025-06-05 01:56:09]     "pilotErrorDiag": "",
[2025-06-05 01:56:09]  *** Listing of results directory ***
[2025-06-05 01:56:09] total 397292
[2025-06-05 01:56:09] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:03 pilot3.tar.gz
[2025-06-05 01:56:09] -rw-r--r-- 1 boinc boinc      5111 Jun  3 16:27 queuedata.json
[2025-06-05 01:56:09] -rwx------ 1 boinc boinc     37140 Jun  3 16:27 runpilot2-wrapper.sh
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc       100 Jun  5 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:56:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:05 run_atlas
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc       105 Jun  5 00:05 job.xml
[2025-06-05 01:56:09] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:05 start_atlas.sh
[2025-06-05 01:56:09] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:05 shared
[2025-06-05 01:56:09] -rw-r--r-- 2 boinc boinc    508887 Jun  5 00:05 input.tar.gz
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc      6933 Jun  5 00:05 init_data.xml
[2025-06-05 01:56:09] -rw-r--r-- 2 boinc boinc 217563053 Jun  5 00:05 EVNT.45006593._001553.pool.root.1
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc         0 Jun  5 00:05 boinc_lockfile
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 00:05 pandaJob.out
[2025-06-05 01:56:09] -rw------- 1 boinc boinc    987117 Jun  5 00:05 agis_schedconf.cvmfs.json
[2025-06-05 01:56:09] -rw------- 1 boinc boinc   1598969 Jun  5 00:05 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:56:09] drwx------ 4 boinc boinc      4096 Jun  5 00:05 pilot3
[2025-06-05 01:56:09] -rw------- 1 boinc boinc 183442853 Jun  5 01:55 HITS.45006595._038732.pool.root.1
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc       530 Jun  5 01:55 boinc_task_state.xml
[2025-06-05 01:56:09] -rw------- 1 boinc boinc      1021 Jun  5 01:55 memory_monitor_summary.json
[2025-06-05 01:56:09] -rw------- 1 boinc boinc    395468 Jun  5 01:55 log.45006595._038732.job.log.tgz.1
[2025-06-05 01:56:09] -rw------- 1 boinc boinc        95 Jun  5 01:55 pilot_heartbeat.json
[2025-06-05 01:56:09] -rw------- 1 boinc boinc      7644 Jun  5 01:55 heartbeat.json
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc        27 Jun  5 01:56 wrapper_checkpoint.txt
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 01:56 boinc_mmap_file
[2025-06-05 01:56:09] -rw------- 1 boinc boinc      4378 Jun  5 01:56 pilotlog.txt
[2025-06-05 01:56:09] -rw------- 1 boinc boinc    600909 Jun  5 01:56 log.45006595._038732.job.log.1
[2025-06-05 01:56:09] -rw------- 1 boinc boinc       357 Jun  5 01:56 output.list
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc       620 Jun  5 01:56 runtime_log
[2025-06-05 01:56:09] -rw------- 1 boinc boinc   1013760 Jun  5 01:56 result.tar.gz
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc      8977 Jun  5 01:56 runtime_log.err
[2025-06-05 01:56:09] -rw------- 1 boinc boinc       651 Jun  5 01:56 lF0NDmRfjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmk3kKDmoZ0oum.diag
[2025-06-05 01:56:09] -rw-rw-r-- 1 boinc boinc     21010 Jun  5 01:56 stderr.txt
[2025-06-05 01:56:09] HITS file was successfully produced:
[2025-06-05 01:56:09] -rw------- 1 boinc boinc 183442853 Jun  5 01:55 shared/HITS.pool.root.1
[2025-06-05 01:56:09]  *** Contents of shared directory: ***
[2025-06-05 01:56:09] total 393124
[2025-06-05 01:56:09] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:05 start_atlas.sh
[2025-06-05 01:56:09] -rw-r--r-- 2 boinc boinc    508887 Jun  5 00:05 input.tar.gz
[2025-06-05 01:56:09] -rw-r--r-- 2 boinc boinc 217563053 Jun  5 00:05 ATLAS.root_0
[2025-06-05 01:56:09] -rw------- 1 boinc boinc 183442853 Jun  5 01:55 HITS.pool.root.1
[2025-06-05 01:56:09] -rw------- 1 boinc boinc   1013760 Jun  5 01:56 result.tar.gz
01:56:10 (1223868): run_atlas exited; CPU time 40892.473071
01:56:10 (1223868): called boinc_finish(0)

</stderr_txt>
]]>

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