Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:04:59 (1198768): wrapper (7.7.26015): starting
00:04:59 (1198768): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:04:59] Arguments: --nthreads 12
[2025-06-05 00:04:59] Threads: 12
[2025-06-05 00:04:59] Checking for CVMFS
[2025-06-05 00:04:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:04:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:04:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:05:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:05:00] 2.12.7.0 29207 2605 83560 146798 0 187 2482105 4096001 11796 130560 17 34835487 99.999 662946 135 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 00:05:00] CVMFS is ok
[2025-06-05 00:05:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:05:00] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 00:05:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 00:05:00] Further information can be found at the LHC@home message board.
[2025-06-05 00:05:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:05:00] Checking for apptainer binary...
[2025-06-05 00:05:00] apptainer is not installed, using version from CVMFS
[2025-06-05 00:05:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:05:00] epyc7v12
[2025-06-05 00:05:00] apptainer works
[2025-06-05 00:05:00] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:05:00] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:05:00] Starting ATLAS job with PandaID=6677782174
[2025-06-05 00:05:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:54:21]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:54:21] 2025-06-05 01:54:08,914 | INFO     | mean x: 1749085021.5196078
[2025-06-05 01:54:21] 2025-06-05 01:54:08,914 | INFO     | mean y: 2584397.3725490198
[2025-06-05 01:54:21] 2025-06-05 01:54:08,915 | INFO     | -- intersect: -96837654283.21576
[2025-06-05 01:54:21] 2025-06-05 01:54:08,915 | INFO     | intersect: -96837654283.21576
[2025-06-05 01:54:21] 2025-06-05 01:54:08,915 | INFO     | chi2: 1.3366848981602273
[2025-06-05 01:54:21] 2025-06-05 01:54:08,915 | INFO     | current chi2=1.3366848981602273 (change=-0.06642374431841497 %)
[2025-06-05 01:54:21] 2025-06-05 01:54:08,915 | INFO     | right removable region: 101
[2025-06-05 01:54:21] 2025-06-05 01:54:08,915 | INFO     | sum of square deviations: 329032263.460785
[2025-06-05 01:54:21] 2025-06-05 01:54:08,916 | INFO     | sum of deviations: 2612053238.7450986
[2025-06-05 01:54:21] 2025-06-05 01:54:08,916 | INFO     | mean x: 1749085326.5196078
[2025-06-05 01:54:21] 2025-06-05 01:54:08,916 | INFO     | mean y: 2636727.6274509802
[2025-06-05 01:54:21] 2025-06-05 01:54:08,916 | INFO     | -- intersect: -13882639883.009796
[2025-06-05 01:54:21] 2025-06-05 01:54:08,916 | INFO     | intersect: -13882639883.009796
[2025-06-05 01:54:21] 2025-06-05 01:54:08,917 | INFO     | chi2: 0.0013144150731207672
[2025-06-05 01:54:21] 2025-06-05 01:54:08,917 | INFO     | current chi2=0.0013144150731207672 (change=99.90160073188238 %)
[2025-06-05 01:54:21] 2025-06-05 01:54:08,917 | INFO     | sum of square deviations: 282974975.9587634
[2025-06-05 01:54:21] 2025-06-05 01:54:08,918 | INFO     | sum of deviations: 1851636038.4123712
[2025-06-05 01:54:21] 2025-06-05 01:54:08,918 | INFO     | mean x: 1749085479.0206184
[2025-06-05 01:54:21] 2025-06-05 01:54:08,918 | INFO     | mean y: 2639220.793814433
[2025-06-05 01:54:21] 2025-06-05 01:54:08,918 | INFO     | -- intersect: -11442435370.149162
[2025-06-05 01:54:21] 2025-06-05 01:54:08,918 | INFO     | intersect: -11442435370.149162
[2025-06-05 01:54:21] 2025-06-05 01:54:08,918 | INFO     | chi2: 0.0005053013655002483
[2025-06-05 01:54:21] 2025-06-05 01:54:08,918 | INFO     | current chi2=0.0005053013655002483 (change=61.55694073862604 %)
[2025-06-05 01:54:21] 2025-06-05 01:54:08,918 | INFO     | sum of square deviations: 241429400.95652175
[2025-06-05 01:54:21] 2025-06-05 01:54:08,919 | INFO     | sum of deviations: 1347397074.2173913
[2025-06-05 01:54:21] 2025-06-05 01:54:08,919 | INFO     | mean x: 1749085631.5217392
[2025-06-05 01:54:21] 2025-06-05 01:54:08,919 | INFO     | mean y: 2641082.1413043477
[2025-06-05 01:54:21] 2025-06-05 01:54:08,919 | INFO     | -- intersect: -9758857944.617588
[2025-06-05 01:54:21] 2025-06-05 01:54:08,919 | INFO     | intersect: -9758857944.617588
[2025-06-05 01:54:21] 2025-06-05 01:54:08,919 | INFO     | chi2: 0.00022744411268328942
[2025-06-05 01:54:21] 2025-06-05 01:54:08,919 | INFO     | current chi2=0.00022744411268328942 (change=54.98842310506726 %)
[2025-06-05 01:54:21] 2025-06-05 01:54:08,919 | INFO     | sum of square deviations: 204162975.95402288
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | sum of deviations: 966838190.1954023
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | mean x: 1749085784.0229886
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | mean y: 2642629.4022988505
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | -- intersect: -8280362288.6986265
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | intersect: -8280362288.6986265
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | chi2: 6.304286155455388e-05
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | current chi2=6.304286155455388e-05 (change=72.28204291120097 %)
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | sum of square deviations: 170943138.4512196
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | sum of deviations: 760740636.2073172
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | mean x: 1749085936.5243902
[2025-06-05 01:54:21] 2025-06-05 01:54:08,920 | INFO     | mean y: 2643572.6463414636
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | -- intersect: -7781235676.256865
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | intersect: -7781235676.256865
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | chi2: 4.728942117071265e-05
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | current chi2=4.728942117071265e-05 (change=24.988460224333334 %)
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | left removable region: 50
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | sum of square deviations: 41113269.921568595
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | sum of deviations: 136970381.372549
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | mean x: 1749086516.0392158
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | mean y: 2646634.31372549
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | -- intersect: -5824499871.242892
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | intersect: -5824499871.242892
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | chi2: 2.0654505835768944e-05
[2025-06-05 01:54:21] 2025-06-05 01:54:08,921 | INFO     | -- intersect: -5824499871.242892
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | current memory leak: 3.33 B/s (using 51 data points, chi2=0.00)
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | ..............................
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | . Timing measurements:
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | . get job = 0 s
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | . initial setup = 1 s
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | . payload setup = 7 s
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | . stage-in = 0 s
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | . payload execution = 6499 s
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | . stage-out = 0 s
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | . log creation = 0 s
[2025-06-05 01:54:21] 2025-06-05 01:54:08,922 | INFO     | ..............................
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | 
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | job summary report
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | --------------------------------------------------
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | PanDA job id: 6677782174
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | task id: 45006595
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | errors: (none)
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | pilot state: finished 
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | transexitcode: 0
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | exeerrorcode: 0
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | exeerrordiag: 
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | exitcode: 0
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | exitmsg: OK
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | cpuconsumptiontime: 39737 s
[2025-06-05 01:54:21] 2025-06-05 01:54:08,983 | INFO     | nevents: 400
[2025-06-05 01:54:21] 2025-06-05 01:54:08,984 | INFO     | neventsw: 0
[2025-06-05 01:54:21] 2025-06-05 01:54:08,984 | INFO     | pid: 1247740
[2025-06-05 01:54:21] 2025-06-05 01:54:08,984 | INFO     | pgrp: 1247740
[2025-06-05 01:54:21] 2025-06-05 01:54:08,984 | INFO     | corecount: 12
[2025-06-05 01:54:21] 2025-06-05 01:54:08,984 | INFO     | event service: False
[2025-06-05 01:54:21] 2025-06-05 01:54:08,984 | INFO     | sizes: {0: 2396514, 1: 2397393, 6: 2397599, 12: 2397627, 6510: 2424670, 6511: 2433657, 6513: 2433841, 6521: 2434011}
[2025-06-05 01:54:21] 2025-06-05 01:54:08,984 | INFO     | --------------------------------------------------
[2025-06-05 01:54:21] 2025-06-05 01:54:08,984 | INFO     | 
[2025-06-05 01:54:21] 2025-06-05 01:54:08,984 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/5
[2025-06-05 01:54:21] 2025-06-05 01:54:09,007 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,007 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,008 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,008 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,008 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,009 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,009 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,009 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,009 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,009 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,009 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,009 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:54:21] 2025-06-05 01:54:09,009 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,010 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:54:21] 2025-06-05 01:54:09,010 | INFO     | job 6677782174 has completed (purged errors)
[2025-06-05 01:54:21] 2025-06-05 01:54:09,010 | INFO     | overall cleanup function is called
[2025-06-05 01:54:21] 2025-06-05 01:54:10,019 | INFO     | --- collectZombieJob: --- 10, [1247740]
[2025-06-05 01:54:21] 2025-06-05 01:54:10,019 | INFO     | zombie collector waiting for pid 1247740
[2025-06-05 01:54:21] 2025-06-05 01:54:10,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:54:21] 2025-06-05 01:54:10,020 | INFO     | collected zombie processes
[2025-06-05 01:54:21] 2025-06-05 01:54:10,020 | INFO     | will attempt to kill all subprocesses of pid=1247740
[2025-06-05 01:54:21] 2025-06-05 01:54:10,302 | INFO     | process IDs to be killed: [1247740] (in reverse order)
[2025-06-05 01:54:21] 2025-06-05 01:54:10,417 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:54:21] 2025-06-05 01:54:10,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:54:21] 2025-06-05 01:54:10,431 | INFO     | did not find any defunct processes belonging to 1247740
[2025-06-05 01:54:21] 2025-06-05 01:54:10,439 | INFO     | did not find any defunct processes belonging to 1247740
[2025-06-05 01:54:21] 2025-06-05 01:54:10,439 | INFO     | ready for new job
[2025-06-05 01:54:21] 2025-06-05 01:54:10,440 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:54:21] 2025-06-05 01:54:10,441 | INFO     | **************************************
[2025-06-05 01:54:21] 2025-06-05 01:54:10,441 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:54:21] 2025-06-05 01:54:10,441 | INFO     | **************************************
[2025-06-05 01:54:21] 2025-06-05 01:54:10,441 | INFO     | 
[2025-06-05 01:54:21] 2025-06-05 01:54:10,467 | INFO     | architecture information:
[2025-06-05 01:54:21] 2025-06-05 01:54:10,467 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:54:21] 2025-06-05 01:54:10,484 | INFO     | cat /etc/os-release:
[2025-06-05 01:54:21] NAME="CentOS Linux"
[2025-06-05 01:54:21] VERSION="7 (Core)"
[2025-06-05 01:54:21] ID="centos"
[2025-06-05 01:54:21] ID_LIKE="rhel fedora"
[2025-06-05 01:54:21] VERSION_ID="7"
[2025-06-05 01:54:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:54:21] ANSI_COLOR="0;31"
[2025-06-05 01:54:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:54:21] HOME_URL="https://www.centos.org/"
[2025-06-05 01:54:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:54:21] 
[2025-06-05 01:54:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:54:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:54:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:54:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:54:21] 
[2025-06-05 01:54:21] 2025-06-05 01:54:10,485 | INFO     | **************************************
[2025-06-05 01:54:21] 2025-06-05 01:54:10,988 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/5
[2025-06-05 01:54:21] 2025-06-05 01:54:11,006 | INFO     | sufficient remaining disk space (336766959616 B)
[2025-06-05 01:54:21] 2025-06-05 01:54:11,006 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:54:21] 2025-06-05 01:54:11,007 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:54:21] 2025-06-05 01:54:11,007 | INFO     | update_server=False
[2025-06-05 01:54:21] 2025-06-05 01:54:11,007 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:54:21] 2025-06-05 01:54:11,007 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:54:21] 2025-06-05 01:54:11,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:54:21] 2025-06-05 01:54:11,008 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:54:21] 2025-06-05 01:54:11,008 | INFO     | aborting loop
[2025-06-05 01:54:21] 2025-06-05 01:54:11,008 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:54:21] 2025-06-05 01:54:11,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:54:21] 2025-06-05 01:54:11,211 | INFO     | all job control threads have been joined
[2025-06-05 01:54:21] 2025-06-05 01:54:11,321 | INFO     | all data control threads have been joined
[2025-06-05 01:54:21] 2025-06-05 01:54:11,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:54:21] 2025-06-05 01:54:12,010 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:12,014 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:12,047 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:12,217 | INFO     | [job] control thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:12,239 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:54:21] 2025-06-05 01:54:12,325 | INFO     | [data] control thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:12,373 | INFO     | all payload control threads have been joined
[2025-06-05 01:54:21] 2025-06-05 01:54:12,402 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:12,597 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:12,640 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:13,144 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:13,259 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:13,302 | INFO     | [job] validate thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:13,379 | INFO     | [payload] control thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:13,407 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:13,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:54:21] 2025-06-05 01:54:14,241 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:14,995 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:15,525 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:54:21] 2025-06-05 01:54:16,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819557345088)>', '<ExcThread(monitor, started 139818809935616)>']
[2025-06-05 01:54:21] 2025-06-05 01:54:17,038 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:54:21] 2025-06-05 01:54:17,039 | INFO     | [monitor] control thread has ended
[2025-06-05 01:54:21] 2025-06-05 01:54:21,433 | INFO     | all workflow threads have been joined
[2025-06-05 01:54:21] 2025-06-05 01:54:21,434 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:54:21] 2025-06-05 01:54:21,434 | INFO     | traces error code: 0
[2025-06-05 01:54:21] 2025-06-05 01:54:21,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:54:21] 2025-06-05 01:54:21,528 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:54:21] 2025-06-05 01:54:21,532 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:54:21] 2025-06-05 01:54:21,536 [wrapper] pilotpid: 1223255
[2025-06-05 01:54:21] 2025-06-05 01:54:21,539 [wrapper] Pilot exit status: 0
[2025-06-05 01:54:21] 2025-06-05 01:54:21,550 [wrapper] pandaids: 6677782174
[2025-06-05 01:54:21] 2025-06-05 01:54:21,624 [wrapper] cleanup supervisor_pilot 1444414 1223258
[2025-06-05 01:54:21] 2025-06-05 01:54:21,628 [wrapper] Test setup, not cleaning
[2025-06-05 01:54:21] 2025-06-05 01:54:21,632 [wrapper] apfmon messages muted
[2025-06-05 01:54:21] 2025-06-05 01:54:21,636 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:54:21] 2025-06-05 01:54:21,640 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:54:21]  *** Error codes and diagnostics ***
[2025-06-05 01:54:21]     "exeErrorCode": 0,
[2025-06-05 01:54:21]     "exeErrorDiag": "",
[2025-06-05 01:54:21]     "pilotErrorCode": 0,
[2025-06-05 01:54:21]     "pilotErrorDiag": "",
[2025-06-05 01:54:21]  *** Listing of results directory ***
[2025-06-05 01:54:21] total 388956
[2025-06-05 01:54:21] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:03 pilot3.tar.gz
[2025-06-05 01:54:21] -rw-r--r-- 1 boinc boinc      5111 Jun  3 16:27 queuedata.json
[2025-06-05 01:54:21] -rwx------ 1 boinc boinc     37140 Jun  3 16:27 runpilot2-wrapper.sh
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc       100 Jun  5 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:54:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:04 run_atlas
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc       105 Jun  5 00:04 job.xml
[2025-06-05 01:54:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:04 start_atlas.sh
[2025-06-05 01:54:21] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:04 shared
[2025-06-05 01:54:21] -rw-r--r-- 2 boinc boinc    508885 Jun  5 00:04 input.tar.gz
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc      6932 Jun  5 00:04 init_data.xml
[2025-06-05 01:54:21] -rw-r--r-- 2 boinc boinc 217563053 Jun  5 00:04 EVNT.45006593._001553.pool.root.1
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc         0 Jun  5 00:04 boinc_lockfile
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 00:05 pandaJob.out
[2025-06-05 01:54:21] -rw------- 1 boinc boinc    987117 Jun  5 00:05 agis_schedconf.cvmfs.json
[2025-06-05 01:54:21] -rw------- 1 boinc boinc   1598969 Jun  5 00:05 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:54:21] drwx------ 4 boinc boinc      4096 Jun  5 00:05 pilot3
[2025-06-05 01:54:21] -rw------- 1 boinc boinc 174965304 Jun  5 01:53 HITS.45006595._038718.pool.root.1
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc       530 Jun  5 01:53 boinc_task_state.xml
[2025-06-05 01:54:21] -rw------- 1 boinc boinc        95 Jun  5 01:53 pilot_heartbeat.json
[2025-06-05 01:54:21] -rw------- 1 boinc boinc      1021 Jun  5 01:53 memory_monitor_summary.json
[2025-06-05 01:54:21] -rw------- 1 boinc boinc    376633 Jun  5 01:53 log.45006595._038718.job.log.tgz.1
[2025-06-05 01:54:21] -rw------- 1 boinc boinc      7640 Jun  5 01:54 heartbeat.json
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc        27 Jun  5 01:54 wrapper_checkpoint.txt
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 01:54 boinc_mmap_file
[2025-06-05 01:54:21] -rw------- 1 boinc boinc      4500 Jun  5 01:54 pilotlog.txt
[2025-06-05 01:54:21] -rw------- 1 boinc boinc    592546 Jun  5 01:54 log.45006595._038718.job.log.1
[2025-06-05 01:54:21] -rw------- 1 boinc boinc       357 Jun  5 01:54 output.list
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc       620 Jun  5 01:54 runtime_log
[2025-06-05 01:54:21] -rw------- 1 boinc boinc    983040 Jun  5 01:54 result.tar.gz
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc      8963 Jun  5 01:54 runtime_log.err
[2025-06-05 01:54:21] -rw------- 1 boinc boinc       651 Jun  5 01:54 jNgNDmRfjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmW3kKDmFBiAqm.diag
[2025-06-05 01:54:21] -rw-rw-r-- 1 boinc boinc     21059 Jun  5 01:54 stderr.txt
[2025-06-05 01:54:21] HITS file was successfully produced:
[2025-06-05 01:54:21] -rw------- 1 boinc boinc 174965304 Jun  5 01:53 shared/HITS.pool.root.1
[2025-06-05 01:54:21]  *** Contents of shared directory: ***
[2025-06-05 01:54:21] total 384816
[2025-06-05 01:54:21] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:04 start_atlas.sh
[2025-06-05 01:54:21] -rw-r--r-- 2 boinc boinc    508885 Jun  5 00:04 input.tar.gz
[2025-06-05 01:54:21] -rw-r--r-- 2 boinc boinc 217563053 Jun  5 00:04 ATLAS.root_0
[2025-06-05 01:54:21] -rw------- 1 boinc boinc 174965304 Jun  5 01:53 HITS.pool.root.1
[2025-06-05 01:54:21] -rw------- 1 boinc boinc    983040 Jun  5 01:54 result.tar.gz
01:54:23 (1198768): run_atlas exited; CPU time 40066.003416
01:54:23 (1198768): called boinc_finish(0)

</stderr_txt>
]]>

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