Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:04:05 (1031351): wrapper (7.7.26015): starting
00:04:05 (1031351): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:04:05] Arguments: --nthreads 12
[2025-06-05 00:04:05] Threads: 12
[2025-06-05 00:04:05] Checking for CVMFS
[2025-06-05 00:04:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:04:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:04:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:04:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:04:05] 2.12.7.0 29207 2604 83048 146798 1 186 2482105 4096001 6638 130560 17 34422550 99.999 662946 135 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 00:04:05] CVMFS is ok
[2025-06-05 00:04:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:04:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 00:04:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 00:04:05] Further information can be found at the LHC@home message board.
[2025-06-05 00:04:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:04:05] Checking for apptainer binary...
[2025-06-05 00:04:05] apptainer is not installed, using version from CVMFS
[2025-06-05 00:04:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:04:06] epyc7v12
[2025-06-05 00:04:06] apptainer works
[2025-06-05 00:04:06] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:04:06] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:04:06] Starting ATLAS job with PandaID=6677782190
[2025-06-05 00:04:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:53:45]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:53:45] 2025-06-05 01:53:29,482 | INFO     | sum of deviations: 19343419334.999996
[2025-06-05 01:53:45] 2025-06-05 01:53:29,482 | INFO     | mean x: 1749085118.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,483 | INFO     | mean y: 2590476.0093457946
[2025-06-05 01:53:45] 2025-06-05 01:53:29,483 | INFO     | -- intersect: -89071699447.95953
[2025-06-05 01:53:45] 2025-06-05 01:53:29,483 | INFO     | intersect: -89071699447.95953
[2025-06-05 01:53:45] 2025-06-05 01:53:29,483 | INFO     | chi2: 1.5044754093189896
[2025-06-05 01:53:45] 2025-06-05 01:53:29,483 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 01:53:45] 2025-06-05 01:53:29,484 | INFO     | sum of deviations: 18269764008.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,484 | INFO     | mean x: 1749084965.5
[2025-06-05 01:53:45] 2025-06-05 01:53:29,484 | INFO     | mean y: 2587252.5490196077
[2025-06-05 01:53:45] 2025-06-05 01:53:29,484 | INFO     | -- intersect: -97116960212.5683
[2025-06-05 01:53:45] 2025-06-05 01:53:29,484 | INFO     | intersect: -97116960212.5683
[2025-06-05 01:53:45] 2025-06-05 01:53:29,484 | INFO     | chi2: 1.5066009765765749
[2025-06-05 01:53:45] 2025-06-05 01:53:29,484 | INFO     | current chi2=1.5066009765765749 (change=-0.14128295114822997 %)
[2025-06-05 01:53:45] 2025-06-05 01:53:29,485 | INFO     | right removable region: 101
[2025-06-05 01:53:45] 2025-06-05 01:53:29,485 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 01:53:45] 2025-06-05 01:53:29,485 | INFO     | sum of deviations: 1867309308.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,485 | INFO     | mean x: 1749085270.5
[2025-06-05 01:53:45] 2025-06-05 01:53:29,486 | INFO     | mean y: 2641844.6078431373
[2025-06-05 01:53:45] 2025-06-05 01:53:29,486 | INFO     | -- intersect: -9923718808.687382
[2025-06-05 01:53:45] 2025-06-05 01:53:29,486 | INFO     | intersect: -9923718808.687382
[2025-06-05 01:53:45] 2025-06-05 01:53:29,486 | INFO     | chi2: 0.0002800499080000535
[2025-06-05 01:53:45] 2025-06-05 01:53:29,486 | INFO     | current chi2=0.0002800499080000535 (change=99.98138554433889 %)
[2025-06-05 01:53:45] 2025-06-05 01:53:29,486 | INFO     | sum of square deviations: 282974608.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,487 | INFO     | sum of deviations: 1555105269.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,487 | INFO     | mean x: 1749085423.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,487 | INFO     | mean y: 2642863.4226804124
[2025-06-05 01:53:45] 2025-06-05 01:53:29,487 | INFO     | -- intersect: -9609569258.586493
[2025-06-05 01:53:45] 2025-06-05 01:53:29,487 | INFO     | intersect: -9609569258.586493
[2025-06-05 01:53:45] 2025-06-05 01:53:29,487 | INFO     | chi2: 0.00016511830822466613
[2025-06-05 01:53:45] 2025-06-05 01:53:29,488 | INFO     | current chi2=0.00016511830822466613 (change=41.03968488908249 %)
[2025-06-05 01:53:45] 2025-06-05 01:53:29,488 | INFO     | sum of square deviations: 241429643.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,488 | INFO     | sum of deviations: 1413270631.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,488 | INFO     | mean x: 1749085575.5
[2025-06-05 01:53:45] 2025-06-05 01:53:29,488 | INFO     | mean y: 2643392.782608696
[2025-06-05 01:53:45] 2025-06-05 01:53:29,489 | INFO     | -- intersect: -10236079757.546877
[2025-06-05 01:53:45] 2025-06-05 01:53:29,489 | INFO     | intersect: -10236079757.546877
[2025-06-05 01:53:45] 2025-06-05 01:53:29,489 | INFO     | chi2: 7.630415339641064e-05
[2025-06-05 01:53:45] 2025-06-05 01:53:29,489 | INFO     | current chi2=7.630415339641064e-05 (change=53.78819331615949 %)
[2025-06-05 01:53:45] 2025-06-05 01:53:29,489 | INFO     | sum of square deviations: 204163828.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,490 | INFO     | sum of deviations: 1139160848.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,490 | INFO     | mean x: 1749085728.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,490 | INFO     | mean y: 2644516.0689655175
[2025-06-05 01:53:45] 2025-06-05 01:53:29,490 | INFO     | -- intersect: -9756625775.107086
[2025-06-05 01:53:45] 2025-06-05 01:53:29,490 | INFO     | intersect: -9756625775.107086
[2025-06-05 01:53:45] 2025-06-05 01:53:29,490 | INFO     | chi2: 6.134177528012225e-05
[2025-06-05 01:53:45] 2025-06-05 01:53:29,490 | INFO     | current chi2=6.134177528012225e-05 (change=19.608864590314973 %)
[2025-06-05 01:53:45] 2025-06-05 01:53:29,490 | INFO     | left removable region: 40
[2025-06-05 01:53:45] 2025-06-05 01:53:29,491 | INFO     | sum of square deviations: 70364110.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,491 | INFO     | sum of deviations: 337377397.0000002
[2025-06-05 01:53:45] 2025-06-05 01:53:29,491 | INFO     | mean x: 1749086155.0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,491 | INFO     | mean y: 2647585.0163934426
[2025-06-05 01:53:45] 2025-06-05 01:53:29,491 | INFO     | -- intersect: -8383760401.9906025
[2025-06-05 01:53:45] 2025-06-05 01:53:29,491 | INFO     | intersect: -8383760401.9906025
[2025-06-05 01:53:45] 2025-06-05 01:53:29,491 | INFO     | chi2: 2.1224485092786837e-05
[2025-06-05 01:53:45] 2025-06-05 01:53:29,492 | INFO     | -- intersect: -8383760401.9906025
[2025-06-05 01:53:45] 2025-06-05 01:53:29,492 | INFO     | current memory leak: 4.79 B/s (using 61 data points, chi2=0.00)
[2025-06-05 01:53:45] 2025-06-05 01:53:29,492 | INFO     | ..............................
[2025-06-05 01:53:45] 2025-06-05 01:53:29,492 | INFO     | . Timing measurements:
[2025-06-05 01:53:45] 2025-06-05 01:53:29,492 | INFO     | . get job = 0 s
[2025-06-05 01:53:45] 2025-06-05 01:53:29,492 | INFO     | . initial setup = 1 s
[2025-06-05 01:53:45] 2025-06-05 01:53:29,492 | INFO     | . payload setup = 7 s
[2025-06-05 01:53:45] 2025-06-05 01:53:29,493 | INFO     | . stage-in = 0 s
[2025-06-05 01:53:45] 2025-06-05 01:53:29,493 | INFO     | . payload execution = 6520 s
[2025-06-05 01:53:45] 2025-06-05 01:53:29,493 | INFO     | . stage-out = 0 s
[2025-06-05 01:53:45] 2025-06-05 01:53:29,493 | INFO     | . log creation = 0 s
[2025-06-05 01:53:45] 2025-06-05 01:53:29,493 | INFO     | ..............................
[2025-06-05 01:53:45] 2025-06-05 01:53:29,595 | INFO     | 
[2025-06-05 01:53:45] 2025-06-05 01:53:29,595 | INFO     | job summary report
[2025-06-05 01:53:45] 2025-06-05 01:53:29,595 | INFO     | --------------------------------------------------
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | PanDA job id: 6677782190
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | task id: 45006595
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | errors: (none)
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | pilot state: finished 
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | transexitcode: 0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | exeerrorcode: 0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | exeerrordiag: 
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | exitcode: 0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | exitmsg: OK
[2025-06-05 01:53:45] 2025-06-05 01:53:29,596 | INFO     | cpuconsumptiontime: 39831 s
[2025-06-05 01:53:45] 2025-06-05 01:53:29,597 | INFO     | nevents: 400
[2025-06-05 01:53:45] 2025-06-05 01:53:29,597 | INFO     | neventsw: 0
[2025-06-05 01:53:45] 2025-06-05 01:53:29,597 | INFO     | pid: 1164737
[2025-06-05 01:53:45] 2025-06-05 01:53:29,597 | INFO     | pgrp: 1164737
[2025-06-05 01:53:45] 2025-06-05 01:53:29,597 | INFO     | corecount: 12
[2025-06-05 01:53:45] 2025-06-05 01:53:29,597 | INFO     | event service: False
[2025-06-05 01:53:45] 2025-06-05 01:53:29,597 | INFO     | sizes: {0: 2397189, 1: 2397388, 6: 2397594, 11: 2397622, 6531: 2424719, 6532: 2433892, 6538: 2434006}
[2025-06-05 01:53:45] 2025-06-05 01:53:29,597 | INFO     | --------------------------------------------------
[2025-06-05 01:53:45] 2025-06-05 01:53:29,597 | INFO     | 
[2025-06-05 01:53:45] 2025-06-05 01:53:29,597 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/17
[2025-06-05 01:53:45] 2025-06-05 01:53:29,621 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,622 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,622 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,622 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,622 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,622 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,623 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,623 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,623 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,623 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,623 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,623 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,623 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,623 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,623 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,624 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:53:45] 2025-06-05 01:53:29,624 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,624 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:53:45] 2025-06-05 01:53:29,624 | INFO     | job 6677782190 has completed (purged errors)
[2025-06-05 01:53:45] 2025-06-05 01:53:29,624 | INFO     | overall cleanup function is called
[2025-06-05 01:53:45] 2025-06-05 01:53:30,633 | INFO     | --- collectZombieJob: --- 10, [1164737]
[2025-06-05 01:53:45] 2025-06-05 01:53:30,634 | INFO     | zombie collector waiting for pid 1164737
[2025-06-05 01:53:45] 2025-06-05 01:53:30,634 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:53:45] 2025-06-05 01:53:30,634 | INFO     | collected zombie processes
[2025-06-05 01:53:45] 2025-06-05 01:53:30,634 | INFO     | will attempt to kill all subprocesses of pid=1164737
[2025-06-05 01:53:45] 2025-06-05 01:53:30,984 | INFO     | process IDs to be killed: [1164737] (in reverse order)
[2025-06-05 01:53:45] 2025-06-05 01:53:31,131 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:53:45] 2025-06-05 01:53:31,132 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:53:45] 2025-06-05 01:53:31,145 | INFO     | did not find any defunct processes belonging to 1164737
[2025-06-05 01:53:45] 2025-06-05 01:53:31,158 | INFO     | did not find any defunct processes belonging to 1164737
[2025-06-05 01:53:45] 2025-06-05 01:53:31,158 | INFO     | ready for new job
[2025-06-05 01:53:45] 2025-06-05 01:53:31,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:53:45] 2025-06-05 01:53:31,160 | INFO     | **************************************
[2025-06-05 01:53:45] 2025-06-05 01:53:31,160 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:53:45] 2025-06-05 01:53:31,160 | INFO     | **************************************
[2025-06-05 01:53:45] 2025-06-05 01:53:31,160 | INFO     | 
[2025-06-05 01:53:45] 2025-06-05 01:53:31,186 | INFO     | architecture information:
[2025-06-05 01:53:45] 2025-06-05 01:53:31,187 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:53:45] 2025-06-05 01:53:31,206 | INFO     | cat /etc/os-release:
[2025-06-05 01:53:45] NAME="CentOS Linux"
[2025-06-05 01:53:45] VERSION="7 (Core)"
[2025-06-05 01:53:45] ID="centos"
[2025-06-05 01:53:45] ID_LIKE="rhel fedora"
[2025-06-05 01:53:45] VERSION_ID="7"
[2025-06-05 01:53:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:53:45] ANSI_COLOR="0;31"
[2025-06-05 01:53:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:53:45] HOME_URL="https://www.centos.org/"
[2025-06-05 01:53:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:53:45] 
[2025-06-05 01:53:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:53:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:53:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:53:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:53:45] 
[2025-06-05 01:53:45] 2025-06-05 01:53:31,207 | INFO     | **************************************
[2025-06-05 01:53:45] 2025-06-05 01:53:31,710 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/17
[2025-06-05 01:53:45] 2025-06-05 01:53:31,728 | INFO     | sufficient remaining disk space (336330752000 B)
[2025-06-05 01:53:45] 2025-06-05 01:53:31,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:53:45] 2025-06-05 01:53:31,729 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:53:45] 2025-06-05 01:53:31,729 | INFO     | update_server=False
[2025-06-05 01:53:45] 2025-06-05 01:53:31,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:53:45] 2025-06-05 01:53:31,730 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:53:45] 2025-06-05 01:53:31,730 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:53:45] 2025-06-05 01:53:31,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:53:45] 2025-06-05 01:53:31,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:53:45] 2025-06-05 01:53:32,005 | INFO     | all data control threads have been joined
[2025-06-05 01:53:45] 2025-06-05 01:53:32,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:53:45] 2025-06-05 01:53:32,069 | INFO     | aborting loop
[2025-06-05 01:53:45] 2025-06-05 01:53:32,246 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:53:45] 2025-06-05 01:53:32,735 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:32,780 | INFO     | all payload control threads have been joined
[2025-06-05 01:53:45] 2025-06-05 01:53:32,798 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:32,909 | INFO     | all job control threads have been joined
[2025-06-05 01:53:45] 2025-06-05 01:53:33,010 | INFO     | [data] control thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:33,075 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:33,197 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:33,354 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:33,453 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:33,497 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:33,785 | INFO     | [payload] control thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:33,914 | INFO     | [job] control thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:34,042 | INFO     | [job] validate thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:34,101 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:34,221 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:34,252 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:34,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:53:45] 2025-06-05 01:53:34,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:53:45] 2025-06-05 01:53:35,609 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:38,849 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:53:45] 2025-06-05 01:53:40,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140319057307456)>', '<ExcThread(monitor, started 140318762579712)>']
[2025-06-05 01:53:45] 2025-06-05 01:53:40,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:53:45] 2025-06-05 01:53:40,776 | INFO     | [monitor] control thread has ended
[2025-06-05 01:53:45] 2025-06-05 01:53:45,151 | INFO     | all workflow threads have been joined
[2025-06-05 01:53:45] 2025-06-05 01:53:45,151 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:53:45] 2025-06-05 01:53:45,151 | INFO     | traces error code: 0
[2025-06-05 01:53:45] 2025-06-05 01:53:45,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:53:45] 2025-06-05 01:53:45,279 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:53:45] 2025-06-05 01:53:45,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:53:45] 2025-06-05 01:53:45,286 [wrapper] pilotpid: 1070191
[2025-06-05 01:53:45] 2025-06-05 01:53:45,289 [wrapper] Pilot exit status: 0
[2025-06-05 01:53:45] 2025-06-05 01:53:45,298 [wrapper] pandaids: 6677782190
[2025-06-05 01:53:45] 2025-06-05 01:53:45,372 [wrapper] cleanup supervisor_pilot 1441048 1070193
[2025-06-05 01:53:45] 2025-06-05 01:53:45,375 [wrapper] Test setup, not cleaning
[2025-06-05 01:53:45] 2025-06-05 01:53:45,377 [wrapper] apfmon messages muted
[2025-06-05 01:53:45] 2025-06-05 01:53:45,380 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:53:45] 2025-06-05 01:53:45,383 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:53:45]  *** Error codes and diagnostics ***
[2025-06-05 01:53:45]     "exeErrorCode": 0,
[2025-06-05 01:53:45]     "exeErrorDiag": "",
[2025-06-05 01:53:45]     "pilotErrorCode": 0,
[2025-06-05 01:53:45]     "pilotErrorDiag": "",
[2025-06-05 01:53:45]  *** Listing of results directory ***
[2025-06-05 01:53:45] total 383936
[2025-06-05 01:53:45] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:03 pilot3.tar.gz
[2025-06-05 01:53:45] -rw-r--r-- 1 boinc boinc      5111 Jun  3 16:27 queuedata.json
[2025-06-05 01:53:45] -rwx------ 1 boinc boinc     37140 Jun  3 16:27 runpilot2-wrapper.sh
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc       100 Jun  5 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:53:45] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:04 run_atlas
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc       105 Jun  5 00:04 job.xml
[2025-06-05 01:53:45] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:04 start_atlas.sh
[2025-06-05 01:53:45] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:04 shared
[2025-06-05 01:53:45] -rw-r--r-- 2 boinc boinc    508884 Jun  5 00:04 input.tar.gz
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc      6933 Jun  5 00:04 init_data.xml
[2025-06-05 01:53:45] -rw-r--r-- 2 boinc boinc 214117743 Jun  5 00:04 EVNT.45006593._001554.pool.root.1
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc         0 Jun  5 00:04 boinc_lockfile
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc      2522 Jun  5 00:04 pandaJob.out
[2025-06-05 01:53:45] -rw------- 1 boinc boinc    987117 Jun  5 00:04 agis_schedconf.cvmfs.json
[2025-06-05 01:53:45] -rw------- 1 boinc boinc   1598969 Jun  5 00:04 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:53:45] drwx------ 4 boinc boinc      4096 Jun  5 00:04 pilot3
[2025-06-05 01:53:45] -rw------- 1 boinc boinc        95 Jun  5 01:52 pilot_heartbeat.json
[2025-06-05 01:53:45] -rw------- 1 boinc boinc 173292561 Jun  5 01:52 HITS.45006595._038734.pool.root.1
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc       530 Jun  5 01:52 boinc_task_state.xml
[2025-06-05 01:53:45] -rw------- 1 boinc boinc      1021 Jun  5 01:53 memory_monitor_summary.json
[2025-06-05 01:53:45] -rw------- 1 boinc boinc    364175 Jun  5 01:53 log.45006595._038734.job.log.tgz.1
[2025-06-05 01:53:45] -rw------- 1 boinc boinc      7637 Jun  5 01:53 heartbeat.json
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc        27 Jun  5 01:53 wrapper_checkpoint.txt
[2025-06-05 01:53:45] -rw------- 1 boinc boinc      4501 Jun  5 01:53 pilotlog.txt
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 01:53 boinc_mmap_file
[2025-06-05 01:53:45] -rw------- 1 boinc boinc    592993 Jun  5 01:53 log.45006595._038734.job.log.1
[2025-06-05 01:53:45] -rw------- 1 boinc boinc       357 Jun  5 01:53 output.list
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc       620 Jun  5 01:53 runtime_log
[2025-06-05 01:53:45] -rw------- 1 boinc boinc    972800 Jun  5 01:53 result.tar.gz
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc      8977 Jun  5 01:53 runtime_log.err
[2025-06-05 01:53:45] -rw------- 1 boinc boinc       651 Jun  5 01:53 FD4NDmRfjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmm3kKDmJYUZAn.diag
[2025-06-05 01:53:45] -rw-rw-r-- 1 boinc boinc     20909 Jun  5 01:53 stderr.txt
[2025-06-05 01:53:45] HITS file was successfully produced:
[2025-06-05 01:53:45] -rw------- 1 boinc boinc 173292561 Jun  5 01:52 shared/HITS.pool.root.1
[2025-06-05 01:53:45]  *** Contents of shared directory: ***
[2025-06-05 01:53:45] total 379808
[2025-06-05 01:53:45] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:04 start_atlas.sh
[2025-06-05 01:53:45] -rw-r--r-- 2 boinc boinc    508884 Jun  5 00:04 input.tar.gz
[2025-06-05 01:53:45] -rw-r--r-- 2 boinc boinc 214117743 Jun  5 00:04 ATLAS.root_0
[2025-06-05 01:53:45] -rw------- 1 boinc boinc 173292561 Jun  5 01:52 HITS.pool.root.1
[2025-06-05 01:53:45] -rw------- 1 boinc boinc    972800 Jun  5 01:53 result.tar.gz
01:53:47 (1031351): run_atlas exited; CPU time 40156.016565
01:53:47 (1031351): called boinc_finish(0)

</stderr_txt>
]]>

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