Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:03:56 (1005658): wrapper (7.7.26015): starting
00:03:56 (1005658): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:03:56] Arguments: --nthreads 12
[2025-06-05 00:03:56] Threads: 12
[2025-06-05 00:03:56] Checking for CVMFS
[2025-06-05 00:03:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:03:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:03:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:03:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:03:57] 2.12.7.0 29207 2604 83188 146798 1 186 2482105 4096001 7685 130560 17 34364605 99.999 662946 135 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 00:03:57] CVMFS is ok
[2025-06-05 00:03:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:03:57] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 00:03:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 00:03:57] Further information can be found at the LHC@home message board.
[2025-06-05 00:03:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:03:57] Checking for apptainer binary...
[2025-06-05 00:03:57] apptainer is not installed, using version from CVMFS
[2025-06-05 00:03:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:03:57] epyc7v12
[2025-06-05 00:03:57] apptainer works
[2025-06-05 00:03:57] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:03:57] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:03:57] Starting ATLAS job with PandaID=6677782240
[2025-06-05 00:03:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:54:59]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:54:59] 2025-06-05 01:54:37,768 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:54:59] 2025-06-05 01:54:37,768 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:54:59] 2025-06-05 01:54:37,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:54:59] 2025-06-05 01:54:37,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:54:59] 2025-06-05 01:54:37,771 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:54:59] 2025-06-05 01:54:37,771 | INFO     | sum of square deviations: 401522009.9633025
[2025-06-05 01:54:59] 2025-06-05 01:54:37,772 | INFO     | sum of deviations: 22263835030.84404
[2025-06-05 01:54:59] 2025-06-05 01:54:37,772 | INFO     | mean x: 1749085171.0183487
[2025-06-05 01:54:59] 2025-06-05 01:54:37,772 | INFO     | mean y: 2538450.5779816513
[2025-06-05 01:54:59] 2025-06-05 01:54:37,772 | INFO     | -- intersect: -96981793008.62952
[2025-06-05 01:54:59] 2025-06-05 01:54:37,772 | INFO     | intersect: -96981793008.62952
[2025-06-05 01:54:59] 2025-06-05 01:54:37,773 | INFO     | chi2: 2.9680786658164733
[2025-06-05 01:54:59] 2025-06-05 01:54:37,773 | INFO     | sum of square deviations: 348758839.96153814
[2025-06-05 01:54:59] 2025-06-05 01:54:37,774 | INFO     | sum of deviations: 28471788312.84615
[2025-06-05 01:54:59] 2025-06-05 01:54:37,774 | INFO     | mean x: 1749085018.5192308
[2025-06-05 01:54:59] 2025-06-05 01:54:37,774 | INFO     | mean y: 2555563.076923077
[2025-06-05 01:54:59] 2025-06-05 01:54:37,774 | INFO     | -- intersect: -142788315039.49225
[2025-06-05 01:54:59] 2025-06-05 01:54:37,774 | INFO     | intersect: -142788315039.49225
[2025-06-05 01:54:59] 2025-06-05 01:54:37,774 | INFO     | chi2: 2.181209072247391
[2025-06-05 01:54:59] 2025-06-05 01:54:37,774 | INFO     | current chi2=2.181209072247391 (change=26.511076092136737 %)
[2025-06-05 01:54:59] 2025-06-05 01:54:37,775 | INFO     | sum of square deviations: 300832969.95959556
[2025-06-05 01:54:59] 2025-06-05 01:54:37,775 | INFO     | sum of deviations: 26860366454.676758
[2025-06-05 01:54:59] 2025-06-05 01:54:37,775 | INFO     | mean x: 1749084866.020202
[2025-06-05 01:54:59] 2025-06-05 01:54:37,775 | INFO     | mean y: 2550432.1616161615
[2025-06-05 01:54:59] 2025-06-05 01:54:37,776 | INFO     | -- intersect: -156167368270.37216
[2025-06-05 01:54:59] 2025-06-05 01:54:37,776 | INFO     | intersect: -156167368270.37216
[2025-06-05 01:54:59] 2025-06-05 01:54:37,776 | INFO     | chi2: 2.1826990347732957
[2025-06-05 01:54:59] 2025-06-05 01:54:37,776 | INFO     | current chi2=2.1826990347732957 (change=-0.06830901928944565 %)
[2025-06-05 01:54:59] 2025-06-05 01:54:37,776 | INFO     | right removable region: 98
[2025-06-05 01:54:59] 2025-06-05 01:54:37,776 | INFO     | sum of square deviations: 348757619.96153814
[2025-06-05 01:54:59] 2025-06-05 01:54:37,777 | INFO     | sum of deviations: -2166591008.769231
[2025-06-05 01:54:59] 2025-06-05 01:54:37,777 | INFO     | mean x: 1749085323.5192308
[2025-06-05 01:54:59] 2025-06-05 01:54:37,777 | INFO     | mean y: 2608250.8846153845
[2025-06-05 01:54:59] 2025-06-05 01:54:37,777 | INFO     | -- intersect: 10868471299.052303
[2025-06-05 01:54:59] 2025-06-05 01:54:37,777 | INFO     | intersect: 10868471299.052303
[2025-06-05 01:54:59] 2025-06-05 01:54:37,778 | INFO     | chi2: 0.86663876612099
[2025-06-05 01:54:59] 2025-06-05 01:54:37,778 | INFO     | current chi2=0.86663876612099 (change=70.8013545563291 %)
[2025-06-05 01:54:59] 2025-06-05 01:54:37,778 | INFO     | sum of square deviations: 300836872.98989975
[2025-06-05 01:54:59] 2025-06-05 01:54:37,778 | INFO     | sum of deviations: -4356205320.888889
[2025-06-05 01:54:59] 2025-06-05 01:54:37,778 | INFO     | mean x: 1749085476.010101
[2025-06-05 01:54:59] 2025-06-05 01:54:37,778 | INFO     | mean y: 2615035.888888889
[2025-06-05 01:54:59] 2025-06-05 01:54:37,778 | INFO     | -- intersect: 25329880877.867275
[2025-06-05 01:54:59] 2025-06-05 01:54:37,778 | INFO     | intersect: 25329880877.867275
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | chi2: 0.8339491017153562
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | current chi2=0.8339491017153562 (change=3.77200578644206 %)
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | left removable region: 20
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | sum of square deviations: 147126479.5
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | sum of deviations: 1346001813.5000005
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | mean x: 1749085445.5
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | mean y: 2640532.782051282
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | -- intersect: -15999048555.479292
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | intersect: -15999048555.479292
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | chi2: 8.319353365205199e-05
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | -- intersect: -15999048555.479292
[2025-06-05 01:54:59] 2025-06-05 01:54:37,779 | INFO     | current memory leak: 9.15 B/s (using 78 data points, chi2=0.00)
[2025-06-05 01:54:59] 2025-06-05 01:54:37,780 | INFO     | ..............................
[2025-06-05 01:54:59] 2025-06-05 01:54:37,780 | INFO     | . Timing measurements:
[2025-06-05 01:54:59] 2025-06-05 01:54:37,780 | INFO     | . get job = 0 s
[2025-06-05 01:54:59] 2025-06-05 01:54:37,780 | INFO     | . initial setup = 1 s
[2025-06-05 01:54:59] 2025-06-05 01:54:37,780 | INFO     | . payload setup = 7 s
[2025-06-05 01:54:59] 2025-06-05 01:54:37,780 | INFO     | . stage-in = 0 s
[2025-06-05 01:54:59] 2025-06-05 01:54:37,780 | INFO     | . payload execution = 6594 s
[2025-06-05 01:54:59] 2025-06-05 01:54:37,780 | INFO     | . stage-out = 0 s
[2025-06-05 01:54:59] 2025-06-05 01:54:37,780 | INFO     | . log creation = 0 s
[2025-06-05 01:54:59] 2025-06-05 01:54:37,780 | INFO     | ..............................
[2025-06-05 01:54:59] 2025-06-05 01:54:37,991 | INFO     | 
[2025-06-05 01:54:59] 2025-06-05 01:54:37,992 | INFO     | job summary report
[2025-06-05 01:54:59] 2025-06-05 01:54:37,992 | INFO     | --------------------------------------------------
[2025-06-05 01:54:59] 2025-06-05 01:54:37,992 | INFO     | PanDA job id: 6677782240
[2025-06-05 01:54:59] 2025-06-05 01:54:37,992 | INFO     | task id: 45006595
[2025-06-05 01:54:59] 2025-06-05 01:54:37,992 | INFO     | errors: (none)
[2025-06-05 01:54:59] 2025-06-05 01:54:37,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:54:59] 2025-06-05 01:54:37,992 | INFO     | pilot state: finished 
[2025-06-05 01:54:59] 2025-06-05 01:54:37,992 | INFO     | transexitcode: 0
[2025-06-05 01:54:59] 2025-06-05 01:54:37,992 | INFO     | exeerrorcode: 0
[2025-06-05 01:54:59] 2025-06-05 01:54:37,992 | INFO     | exeerrordiag: 
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | exitcode: 0
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | exitmsg: OK
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | cpuconsumptiontime: 40325 s
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | nevents: 400
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | neventsw: 0
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | pid: 1130050
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | pgrp: 1130050
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | corecount: 12
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | event service: False
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | sizes: {0: 2397137, 1: 2397336, 6: 2397542, 11: 2397570, 6606: 2424638, 6607: 2433625, 6608: 2433809, 6614: 2433979}
[2025-06-05 01:54:59] 2025-06-05 01:54:37,993 | INFO     | --------------------------------------------------
[2025-06-05 01:54:59] 2025-06-05 01:54:37,994 | INFO     | 
[2025-06-05 01:54:59] 2025-06-05 01:54:37,994 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/8
[2025-06-05 01:54:59] 2025-06-05 01:54:38,016 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,017 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,017 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,017 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,019 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,019 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,019 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,019 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,019 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:54:59] 2025-06-05 01:54:38,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,020 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:54:59] 2025-06-05 01:54:38,020 | INFO     | job 6677782240 has completed (purged errors)
[2025-06-05 01:54:59] 2025-06-05 01:54:38,020 | INFO     | overall cleanup function is called
[2025-06-05 01:54:59] 2025-06-05 01:54:38,331 | INFO     | PID=1034620 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 01:54:59] 2025-06-05 01:54:38,331 | INFO     | .. there are 9 such processes running
[2025-06-05 01:54:59] 2025-06-05 01:54:39,030 | INFO     | --- collectZombieJob: --- 10, [1130050]
[2025-06-05 01:54:59] 2025-06-05 01:54:39,030 | INFO     | zombie collector waiting for pid 1130050
[2025-06-05 01:54:59] 2025-06-05 01:54:39,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:54:59] 2025-06-05 01:54:39,031 | INFO     | collected zombie processes
[2025-06-05 01:54:59] 2025-06-05 01:54:39,031 | INFO     | will attempt to kill all subprocesses of pid=1130050
[2025-06-05 01:54:59] 2025-06-05 01:54:39,276 | INFO     | process IDs to be killed: [1130050] (in reverse order)
[2025-06-05 01:54:59] 2025-06-05 01:54:39,389 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:54:59] 2025-06-05 01:54:39,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:54:59] 2025-06-05 01:54:39,402 | INFO     | did not find any defunct processes belonging to 1130050
[2025-06-05 01:54:59] 2025-06-05 01:54:39,409 | INFO     | did not find any defunct processes belonging to 1130050
[2025-06-05 01:54:59] 2025-06-05 01:54:39,409 | INFO     | ready for new job
[2025-06-05 01:54:59] 2025-06-05 01:54:39,409 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:54:59] 2025-06-05 01:54:39,410 | INFO     | **************************************
[2025-06-05 01:54:59] 2025-06-05 01:54:39,410 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:54:59] 2025-06-05 01:54:39,410 | INFO     | **************************************
[2025-06-05 01:54:59] 2025-06-05 01:54:39,410 | INFO     | 
[2025-06-05 01:54:59] 2025-06-05 01:54:39,439 | INFO     | architecture information:
[2025-06-05 01:54:59] 2025-06-05 01:54:39,440 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:54:59] 2025-06-05 01:54:39,457 | INFO     | cat /etc/os-release:
[2025-06-05 01:54:59] NAME="CentOS Linux"
[2025-06-05 01:54:59] VERSION="7 (Core)"
[2025-06-05 01:54:59] ID="centos"
[2025-06-05 01:54:59] ID_LIKE="rhel fedora"
[2025-06-05 01:54:59] VERSION_ID="7"
[2025-06-05 01:54:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:54:59] ANSI_COLOR="0;31"
[2025-06-05 01:54:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:54:59] HOME_URL="https://www.centos.org/"
[2025-06-05 01:54:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:54:59] 
[2025-06-05 01:54:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:54:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:54:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:54:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:54:59] 
[2025-06-05 01:54:59] 2025-06-05 01:54:39,457 | INFO     | **************************************
[2025-06-05 01:54:59] 2025-06-05 01:54:39,960 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/8
[2025-06-05 01:54:59] 2025-06-05 01:54:39,978 | INFO     | sufficient remaining disk space (337428611072 B)
[2025-06-05 01:54:59] 2025-06-05 01:54:39,978 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:54:59] 2025-06-05 01:54:39,979 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:54:59] 2025-06-05 01:54:39,979 | INFO     | update_server=False
[2025-06-05 01:54:59] 2025-06-05 01:54:39,979 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:54:59] 2025-06-05 01:54:39,979 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:54:59] 2025-06-05 01:54:39,979 | INFO     | aborting loop
[2025-06-05 01:54:59] 2025-06-05 01:54:40,337 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:54:59] 2025-06-05 01:54:40,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:54:59] 2025-06-05 01:54:40,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:54:59] 2025-06-05 01:54:40,752 | INFO     | all payload control threads have been joined
[2025-06-05 01:54:59] 2025-06-05 01:54:40,874 | INFO     | all data control threads have been joined
[2025-06-05 01:54:59] 2025-06-05 01:54:40,984 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:40,985 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:41,054 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:41,213 | INFO     | all job control threads have been joined
[2025-06-05 01:54:59] 2025-06-05 01:54:41,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:54:59] 2025-06-05 01:54:41,373 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:41,650 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:41,753 | INFO     | [payload] control thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:41,777 | INFO     | [job] validate thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:41,801 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:41,805 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:41,877 | INFO     | [data] control thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:41,962 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:54:59] 2025-06-05 01:54:42,217 | INFO     | [job] control thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:42,401 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:42,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:54:59] 2025-06-05 01:54:43,294 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:43,855 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:45,965 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:50,785 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:54:59] 2025-06-05 01:54:51,791 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:54:59] 2025-06-05 01:54:53,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891094972224)>', '<ExcThread(monitor, started 139890289268480)>']
[2025-06-05 01:54:59] 2025-06-05 01:54:54,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:54:59] 2025-06-05 01:54:54,401 | INFO     | [monitor] control thread has ended
[2025-06-05 01:54:59] 2025-06-05 01:54:58,771 | INFO     | all workflow threads have been joined
[2025-06-05 01:54:59] 2025-06-05 01:54:58,771 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:54:59] 2025-06-05 01:54:58,772 | INFO     | traces error code: 0
[2025-06-05 01:54:59] 2025-06-05 01:54:58,772 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:54:59] 2025-06-05 01:54:58,858 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:54:59] 2025-06-05 01:54:58,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:54:59] 2025-06-05 01:54:58,865 [wrapper] pilotpid: 1034620
[2025-06-05 01:54:59] 2025-06-05 01:54:58,869 [wrapper] Pilot exit status: 0
[2025-06-05 01:54:59] 2025-06-05 01:54:58,881 [wrapper] pandaids: 6677782240
[2025-06-05 01:54:59] 2025-06-05 01:54:58,945 [wrapper] cleanup supervisor_pilot 1441006 1034622
[2025-06-05 01:54:59] 2025-06-05 01:54:58,949 [wrapper] Test setup, not cleaning
[2025-06-05 01:54:59] 2025-06-05 01:54:58,953 [wrapper] apfmon messages muted
[2025-06-05 01:54:59] 2025-06-05 01:54:58,956 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:54:59] 2025-06-05 01:54:58,959 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:54:59]  *** Error codes and diagnostics ***
[2025-06-05 01:54:59]     "exeErrorCode": 0,
[2025-06-05 01:54:59]     "exeErrorDiag": "",
[2025-06-05 01:54:59]     "pilotErrorCode": 0,
[2025-06-05 01:54:59]     "pilotErrorDiag": "",
[2025-06-05 01:54:59]  *** Listing of results directory ***
[2025-06-05 01:54:59] total 390452
[2025-06-05 01:54:59] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:31 pilot3.tar.gz
[2025-06-05 01:54:59] -rwx------ 1 boinc boinc     37140 Jun  3 16:34 runpilot2-wrapper.sh
[2025-06-05 01:54:59] -rw-r--r-- 1 boinc boinc      5111 Jun  3 16:34 queuedata.json
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc       100 Jun  5 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:54:59] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:03 run_atlas
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc       105 Jun  5 00:03 job.xml
[2025-06-05 01:54:59] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:03 start_atlas.sh
[2025-06-05 01:54:59] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:03 shared
[2025-06-05 01:54:59] -rw-r--r-- 2 boinc boinc    508879 Jun  5 00:03 input.tar.gz
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc      6932 Jun  5 00:03 init_data.xml
[2025-06-05 01:54:59] -rw-r--r-- 2 boinc boinc 218456741 Jun  5 00:03 EVNT.45006593._001556.pool.root.1
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc         0 Jun  5 00:03 boinc_lockfile
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc      2521 Jun  5 00:03 pandaJob.out
[2025-06-05 01:54:59] -rw------- 1 boinc boinc    987117 Jun  5 00:04 agis_schedconf.cvmfs.json
[2025-06-05 01:54:59] -rw------- 1 boinc boinc   1598969 Jun  5 00:04 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:54:59] drwx------ 4 boinc boinc      4096 Jun  5 00:04 pilot3
[2025-06-05 01:54:59] -rw------- 1 boinc boinc        95 Jun  5 01:53 pilot_heartbeat.json
[2025-06-05 01:54:59] -rw------- 1 boinc boinc 175605530 Jun  5 01:54 HITS.45006595._038784.pool.root.1
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc       530 Jun  5 01:54 boinc_task_state.xml
[2025-06-05 01:54:59] -rw------- 1 boinc boinc      1021 Jun  5 01:54 memory_monitor_summary.json
[2025-06-05 01:54:59] -rw------- 1 boinc boinc    366399 Jun  5 01:54 log.45006595._038784.job.log.tgz.1
[2025-06-05 01:54:59] -rw------- 1 boinc boinc      7641 Jun  5 01:54 heartbeat.json
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc        27 Jun  5 01:54 wrapper_checkpoint.txt
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 01:54 boinc_mmap_file
[2025-06-05 01:54:59] -rw------- 1 boinc boinc      4449 Jun  5 01:54 pilotlog.txt
[2025-06-05 01:54:59] -rw------- 1 boinc boinc    597368 Jun  5 01:54 log.45006595._038784.job.log.1
[2025-06-05 01:54:59] -rw------- 1 boinc boinc       357 Jun  5 01:54 output.list
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc       620 Jun  5 01:54 runtime_log
[2025-06-05 01:54:59] -rw------- 1 boinc boinc    983040 Jun  5 01:54 result.tar.gz
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc      8963 Jun  5 01:54 runtime_log.err
[2025-06-05 01:54:59] -rw------- 1 boinc boinc       651 Jun  5 01:54 KNYNDmFmjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZ4kKDmK229Zn.diag
[2025-06-05 01:54:59] -rw-rw-r-- 1 boinc boinc     21092 Jun  5 01:54 stderr.txt
[2025-06-05 01:54:59] HITS file was successfully produced:
[2025-06-05 01:54:59] -rw------- 1 boinc boinc 175605530 Jun  5 01:54 shared/HITS.pool.root.1
[2025-06-05 01:54:59]  *** Contents of shared directory: ***
[2025-06-05 01:54:59] total 386316
[2025-06-05 01:54:59] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:03 start_atlas.sh
[2025-06-05 01:54:59] -rw-r--r-- 2 boinc boinc    508879 Jun  5 00:03 input.tar.gz
[2025-06-05 01:54:59] -rw-r--r-- 2 boinc boinc 218456741 Jun  5 00:03 ATLAS.root_0
[2025-06-05 01:54:59] -rw------- 1 boinc boinc 175605530 Jun  5 01:54 HITS.pool.root.1
[2025-06-05 01:54:59] -rw------- 1 boinc boinc    983040 Jun  5 01:54 result.tar.gz
01:55:00 (1005658): run_atlas exited; CPU time 40655.809820
01:55:00 (1005658): called boinc_finish(0)

</stderr_txt>
]]>

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