Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:04:00 (1021385): wrapper (7.7.26015): starting
00:04:00 (1021385): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:04:00] Arguments: --nthreads 12
[2025-06-05 00:04:00] Threads: 12
[2025-06-05 00:04:00] Checking for CVMFS
[2025-06-05 00:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:04:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:04:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:04:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:04:01] 2.12.7.0 29207 2604 83172 146798 1 186 2482105 4096001 7689 130560 17 34397359 99.999 662946 135 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 00:04:01] CVMFS is ok
[2025-06-05 00:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:04:01] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 00:04:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 00:04:01] Further information can be found at the LHC@home message board.
[2025-06-05 00:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:04:01] Checking for apptainer binary...
[2025-06-05 00:04:01] apptainer is not installed, using version from CVMFS
[2025-06-05 00:04:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:04:01] epyc7v12
[2025-06-05 00:04:01] apptainer works
[2025-06-05 00:04:01] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:04:01] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:04:01] Starting ATLAS job with PandaID=6677864083
[2025-06-05 00:04:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:55:05]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:55:05] 2025-06-05 01:54:45,991 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:55:05] 2025-06-05 01:54:45,991 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:55:05] 2025-06-05 01:54:45,991 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:55:05] 2025-06-05 01:54:45,994 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:55:05] 2025-06-05 01:54:45,994 | INFO     | sum of square deviations: 401527498.990825
[2025-06-05 01:55:05] 2025-06-05 01:54:45,995 | INFO     | sum of deviations: 13877748745.348625
[2025-06-05 01:55:05] 2025-06-05 01:54:45,995 | INFO     | mean x: 1749085175.0091743
[2025-06-05 01:55:05] 2025-06-05 01:54:45,995 | INFO     | mean y: 2562478.651376147
[2025-06-05 01:55:05] 2025-06-05 01:54:45,995 | INFO     | -- intersect: -60449995948.85026
[2025-06-05 01:55:05] 2025-06-05 01:54:45,996 | INFO     | intersect: -60449995948.85026
[2025-06-05 01:55:05] 2025-06-05 01:54:45,996 | INFO     | chi2: 2.2960261813180374
[2025-06-05 01:55:05] 2025-06-05 01:54:45,996 | INFO     | sum of square deviations: 348764023.9903839
[2025-06-05 01:55:05] 2025-06-05 01:54:45,997 | INFO     | sum of deviations: 20433265007.15384
[2025-06-05 01:55:05] 2025-06-05 01:54:45,997 | INFO     | mean x: 1749085022.5096154
[2025-06-05 01:55:05] 2025-06-05 01:54:45,997 | INFO     | mean y: 2580613.846153846
[2025-06-05 01:55:05] 2025-06-05 01:54:45,997 | INFO     | -- intersect: -102472202696.85452
[2025-06-05 01:55:05] 2025-06-05 01:54:45,997 | INFO     | intersect: -102472202696.85452
[2025-06-05 01:55:05] 2025-06-05 01:54:45,998 | INFO     | chi2: 1.528593690389582
[2025-06-05 01:55:05] 2025-06-05 01:54:45,998 | INFO     | current chi2=1.528593690389582 (change=33.42437891922946 %)
[2025-06-05 01:55:05] 2025-06-05 01:54:45,998 | INFO     | sum of square deviations: 300837848.98989975
[2025-06-05 01:55:05] 2025-06-05 01:54:45,998 | INFO     | sum of deviations: 19306708028.474743
[2025-06-05 01:55:05] 2025-06-05 01:54:45,998 | INFO     | mean x: 1749084870.010101
[2025-06-05 01:55:05] 2025-06-05 01:54:45,998 | INFO     | mean y: 2577026.525252525
[2025-06-05 01:55:05] 2025-06-05 01:54:45,998 | INFO     | -- intersect: -112247497276.59702
[2025-06-05 01:55:05] 2025-06-05 01:54:45,998 | INFO     | intersect: -112247497276.59702
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | chi2: 1.529819696691892
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | current chi2=1.529819696691892 (change=-0.08020485168936507 %)
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | right removable region: 98
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | sum of square deviations: 348763413.9903839
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | sum of deviations: -4832748208.278847
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | mean x: 1749085327.5096154
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | mean y: 2615655.778846154
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | -- intersect: 24239357938.84979
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | intersect: 24239357938.84979
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | chi2: 0.8023062477884952
[2025-06-05 01:55:05] 2025-06-05 01:54:45,999 | INFO     | current chi2=0.8023062477884952 (change=65.0567465512118 %)
[2025-06-05 01:55:05] 2025-06-05 01:54:46,000 | INFO     | sum of square deviations: 300842850.0
[2025-06-05 01:55:05] 2025-06-05 01:54:46,000 | INFO     | sum of deviations: -5171277013.0
[2025-06-05 01:55:05] 2025-06-05 01:54:46,000 | INFO     | mean x: 1749085480.0
[2025-06-05 01:55:05] 2025-06-05 01:54:46,000 | INFO     | mean y: 2616705.5353535353
[2025-06-05 01:55:05] 2025-06-05 01:54:46,000 | INFO     | -- intersect: 30068165999.78008
[2025-06-05 01:55:05] 2025-06-05 01:54:46,000 | INFO     | intersect: 30068165999.78008
[2025-06-05 01:55:05] 2025-06-05 01:54:46,000 | INFO     | chi2: 0.8025062696604118
[2025-06-05 01:55:05] 2025-06-05 01:54:46,000 | INFO     | current chi2=0.8025062696604118 (change=-0.024930863054841764 %)
[2025-06-05 01:55:05] 2025-06-05 01:54:46,000 | INFO     | left removable region: 20
[2025-06-05 01:55:05] 2025-06-05 01:54:46,000 | INFO     | sum of square deviations: 147126479.5
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | sum of deviations: 900652037.5000002
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | mean x: 1749085449.5
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | mean y: 2641356.141025641
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | -- intersect: -10704590810.409786
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | intersect: -10704590810.409786
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | chi2: 0.00023451449696088142
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | -- intersect: -10704590810.409786
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | current memory leak: 6.12 B/s (using 78 data points, chi2=0.00)
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | ..............................
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | . Timing measurements:
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | . get job = 0 s
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | . initial setup = 1 s
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | . payload setup = 7 s
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | . stage-in = 0 s
[2025-06-05 01:55:05] 2025-06-05 01:54:46,001 | INFO     | . payload execution = 6598 s
[2025-06-05 01:55:05] 2025-06-05 01:54:46,002 | INFO     | . stage-out = 0 s
[2025-06-05 01:55:05] 2025-06-05 01:54:46,002 | INFO     | . log creation = 0 s
[2025-06-05 01:55:05] 2025-06-05 01:54:46,002 | INFO     | ..............................
[2025-06-05 01:55:05] 2025-06-05 01:54:46,058 | INFO     | 
[2025-06-05 01:55:05] 2025-06-05 01:54:46,059 | INFO     | job summary report
[2025-06-05 01:55:05] 2025-06-05 01:54:46,059 | INFO     | --------------------------------------------------
[2025-06-05 01:55:05] 2025-06-05 01:54:46,059 | INFO     | PanDA job id: 6677864083
[2025-06-05 01:55:05] 2025-06-05 01:54:46,059 | INFO     | task id: 45006595
[2025-06-05 01:55:05] 2025-06-05 01:54:46,059 | INFO     | errors: (none)
[2025-06-05 01:55:05] 2025-06-05 01:54:46,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:55:05] 2025-06-05 01:54:46,059 | INFO     | pilot state: finished 
[2025-06-05 01:55:05] 2025-06-05 01:54:46,059 | INFO     | transexitcode: 0
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | exeerrorcode: 0
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | exeerrordiag: 
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | exitcode: 0
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | exitmsg: OK
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | cpuconsumptiontime: 41179 s
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | nevents: 400
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | neventsw: 0
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | pid: 1151232
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | pgrp: 1151232
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | corecount: 12
[2025-06-05 01:55:05] 2025-06-05 01:54:46,060 | INFO     | event service: False
[2025-06-05 01:55:05] 2025-06-05 01:54:46,061 | INFO     | sizes: {0: 2397138, 1: 2397393, 6: 2397599, 11: 2397627, 6610: 2433713, 6613: 2433713, 6618: 2434011}
[2025-06-05 01:55:05] 2025-06-05 01:54:46,061 | INFO     | --------------------------------------------------
[2025-06-05 01:55:05] 2025-06-05 01:54:46,061 | INFO     | 
[2025-06-05 01:55:05] 2025-06-05 01:54:46,061 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/2
[2025-06-05 01:55:05] 2025-06-05 01:54:46,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:55:05] 2025-06-05 01:54:46,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,084 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:55:05] 2025-06-05 01:54:46,084 | INFO     | job 6677864083 has completed (purged errors)
[2025-06-05 01:55:05] 2025-06-05 01:54:46,084 | INFO     | overall cleanup function is called
[2025-06-05 01:55:05] 2025-06-05 01:54:47,093 | INFO     | --- collectZombieJob: --- 10, [1151232]
[2025-06-05 01:55:05] 2025-06-05 01:54:47,094 | INFO     | zombie collector waiting for pid 1151232
[2025-06-05 01:55:05] 2025-06-05 01:54:47,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:55:05] 2025-06-05 01:54:47,094 | INFO     | collected zombie processes
[2025-06-05 01:55:05] 2025-06-05 01:54:47,094 | INFO     | will attempt to kill all subprocesses of pid=1151232
[2025-06-05 01:55:05] 2025-06-05 01:54:47,672 | INFO     | process IDs to be killed: [1151232] (in reverse order)
[2025-06-05 01:55:05] 2025-06-05 01:54:47,765 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:55:05] 2025-06-05 01:54:47,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:55:05] 2025-06-05 01:54:47,797 | INFO     | did not find any defunct processes belonging to 1151232
[2025-06-05 01:55:05] 2025-06-05 01:54:47,811 | INFO     | did not find any defunct processes belonging to 1151232
[2025-06-05 01:55:05] 2025-06-05 01:54:47,811 | INFO     | ready for new job
[2025-06-05 01:55:05] 2025-06-05 01:54:47,811 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:55:05] 2025-06-05 01:54:47,812 | INFO     | **************************************
[2025-06-05 01:55:05] 2025-06-05 01:54:47,813 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:55:05] 2025-06-05 01:54:47,813 | INFO     | **************************************
[2025-06-05 01:55:05] 2025-06-05 01:54:47,813 | INFO     | 
[2025-06-05 01:55:05] 2025-06-05 01:54:47,828 | INFO     | PID=1056028 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 01:55:05] 2025-06-05 01:54:47,828 | INFO     | .. there are 9 such processes running
[2025-06-05 01:55:05] 2025-06-05 01:54:47,840 | INFO     | architecture information:
[2025-06-05 01:55:05] 2025-06-05 01:54:47,841 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:55:05] 2025-06-05 01:54:47,858 | INFO     | cat /etc/os-release:
[2025-06-05 01:55:05] NAME="CentOS Linux"
[2025-06-05 01:55:05] VERSION="7 (Core)"
[2025-06-05 01:55:05] ID="centos"
[2025-06-05 01:55:05] ID_LIKE="rhel fedora"
[2025-06-05 01:55:05] VERSION_ID="7"
[2025-06-05 01:55:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:55:05] ANSI_COLOR="0;31"
[2025-06-05 01:55:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:55:05] HOME_URL="https://www.centos.org/"
[2025-06-05 01:55:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:55:05] 
[2025-06-05 01:55:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:55:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:55:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:55:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:55:05] 
[2025-06-05 01:55:05] 2025-06-05 01:54:47,858 | INFO     | **************************************
[2025-06-05 01:55:05] 2025-06-05 01:54:48,361 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/2
[2025-06-05 01:55:05] 2025-06-05 01:54:48,381 | INFO     | sufficient remaining disk space (337436999680 B)
[2025-06-05 01:55:05] 2025-06-05 01:54:48,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:55:05] 2025-06-05 01:54:48,382 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:55:05] 2025-06-05 01:54:48,382 | INFO     | update_server=False
[2025-06-05 01:55:05] 2025-06-05 01:54:48,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:55:05] 2025-06-05 01:54:48,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:55:05] 2025-06-05 01:54:48,383 | INFO     | aborting loop
[2025-06-05 01:55:05] 2025-06-05 01:54:48,383 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 01:55:05] 2025-06-05 01:54:48,383 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:55:05] 2025-06-05 01:54:48,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:55:05] 2025-06-05 01:54:48,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:55:05] 2025-06-05 01:54:48,614 | INFO     | all data control threads have been joined
[2025-06-05 01:55:05] 2025-06-05 01:54:48,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:55:05] 2025-06-05 01:54:48,990 | INFO     | all job control threads have been joined
[2025-06-05 01:55:05] 2025-06-05 01:54:49,388 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:49,388 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:49,492 | INFO     | all payload control threads have been joined
[2025-06-05 01:55:05] 2025-06-05 01:54:49,619 | INFO     | [data] control thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:49,716 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:49,921 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:49,995 | INFO     | [job] control thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:50,454 | INFO     | [job] validate thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:50,454 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:50,497 | INFO     | [payload] control thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:50,662 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:50,726 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:50,739 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:50,813 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:51,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:55:05] 2025-06-05 01:54:51,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:55:05] 2025-06-05 01:54:52,073 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:55,798 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:54:58,941 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:55:05] 2025-06-05 01:54:59,945 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:55:05] 2025-06-05 01:55:00,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510394058560)>', '<ExcThread(monitor, started 140509964125952)>']
[2025-06-05 01:55:05] 2025-06-05 01:55:01,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:55:05] 2025-06-05 01:55:01,434 | INFO     | [monitor] control thread has ended
[2025-06-05 01:55:05] 2025-06-05 01:55:05,677 | INFO     | all workflow threads have been joined
[2025-06-05 01:55:05] 2025-06-05 01:55:05,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:55:05] 2025-06-05 01:55:05,677 | INFO     | traces error code: 0
[2025-06-05 01:55:05] 2025-06-05 01:55:05,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:55:05] 2025-06-05 01:55:05,758 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:55:05] 2025-06-05 01:55:05,761 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:55:05] 2025-06-05 01:55:05,765 [wrapper] pilotpid: 1056028
[2025-06-05 01:55:05] 2025-06-05 01:55:05,769 [wrapper] Pilot exit status: 0
[2025-06-05 01:55:05] 2025-06-05 01:55:05,782 [wrapper] pandaids: 6677864083
[2025-06-05 01:55:05] 2025-06-05 01:55:05,847 [wrapper] cleanup supervisor_pilot 1441034 1056030
[2025-06-05 01:55:05] 2025-06-05 01:55:05,851 [wrapper] Test setup, not cleaning
[2025-06-05 01:55:05] 2025-06-05 01:55:05,854 [wrapper] apfmon messages muted
[2025-06-05 01:55:05] 2025-06-05 01:55:05,857 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:55:05] 2025-06-05 01:55:05,860 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:55:05]  *** Error codes and diagnostics ***
[2025-06-05 01:55:05]     "exeErrorCode": 0,
[2025-06-05 01:55:05]     "exeErrorDiag": "",
[2025-06-05 01:55:05]     "pilotErrorCode": 0,
[2025-06-05 01:55:05]     "pilotErrorDiag": "",
[2025-06-05 01:55:05]  *** Listing of results directory ***
[2025-06-05 01:55:05] total 394740
[2025-06-05 01:55:05] -rw-r--r-- 1 boinc boinc    495897 Jun  3 17:46 pilot3.tar.gz
[2025-06-05 01:55:05] -rw-r--r-- 1 boinc boinc      5111 Jun  3 17:48 queuedata.json
[2025-06-05 01:55:05] -rwx------ 1 boinc boinc     37140 Jun  3 17:48 runpilot2-wrapper.sh
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc       100 Jun  5 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:55:05] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:04 run_atlas
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc       105 Jun  5 00:04 job.xml
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc      6932 Jun  5 00:04 init_data.xml
[2025-06-05 01:55:05] -rw-r--r-- 2 boinc boinc 215175465 Jun  5 00:04 EVNT.45006593._001637.pool.root.1
[2025-06-05 01:55:05] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:04 start_atlas.sh
[2025-06-05 01:55:05] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:04 shared
[2025-06-05 01:55:05] -rw-r--r-- 2 boinc boinc    508883 Jun  5 00:04 input.tar.gz
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc         0 Jun  5 00:04 boinc_lockfile
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 00:04 pandaJob.out
[2025-06-05 01:55:05] -rw------- 1 boinc boinc    987117 Jun  5 00:04 agis_schedconf.cvmfs.json
[2025-06-05 01:55:05] -rw------- 1 boinc boinc   1598969 Jun  5 00:04 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:55:05] drwx------ 4 boinc boinc      4096 Jun  5 00:04 pilot3
[2025-06-05 01:55:05] -rw------- 1 boinc boinc 183227903 Jun  5 01:54 HITS.45006595._040864.pool.root.1
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc       530 Jun  5 01:54 boinc_task_state.xml
[2025-06-05 01:55:05] -rw------- 1 boinc boinc        95 Jun  5 01:54 pilot_heartbeat.json
[2025-06-05 01:55:05] -rw------- 1 boinc boinc      1021 Jun  5 01:54 memory_monitor_summary.json
[2025-06-05 01:55:05] -rw------- 1 boinc boinc    390485 Jun  5 01:54 log.45006595._040864.job.log.tgz.1
[2025-06-05 01:55:05] -rw------- 1 boinc boinc      7646 Jun  5 01:54 heartbeat.json
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc        27 Jun  5 01:55 wrapper_checkpoint.txt
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 01:55 boinc_mmap_file
[2025-06-05 01:55:05] -rw------- 1 boinc boinc      4967 Jun  5 01:55 pilotlog.txt
[2025-06-05 01:55:05] -rw------- 1 boinc boinc    599193 Jun  5 01:55 log.45006595._040864.job.log.1
[2025-06-05 01:55:05] -rw------- 1 boinc boinc       357 Jun  5 01:55 output.list
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc       620 Jun  5 01:55 runtime_log
[2025-06-05 01:55:05] -rw------- 1 boinc boinc   1003520 Jun  5 01:55 result.tar.gz
[2025-06-05 01:55:05] -rw------- 1 boinc boinc       651 Jun  5 01:55 wtrNDmNvkg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCRlKDmk1i1gm.diag
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc      8963 Jun  5 01:55 runtime_log.err
[2025-06-05 01:55:05] -rw-rw-r-- 1 boinc boinc     21095 Jun  5 01:55 stderr.txt
[2025-06-05 01:55:05] HITS file was successfully produced:
[2025-06-05 01:55:05] -rw------- 1 boinc boinc 183227903 Jun  5 01:54 shared/HITS.pool.root.1
[2025-06-05 01:55:05]  *** Contents of shared directory: ***
[2025-06-05 01:55:05] total 390576
[2025-06-05 01:55:05] -rw-r--r-- 2 boinc boinc 215175465 Jun  5 00:04 ATLAS.root_0
[2025-06-05 01:55:05] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:04 start_atlas.sh
[2025-06-05 01:55:05] -rw-r--r-- 2 boinc boinc    508883 Jun  5 00:04 input.tar.gz
[2025-06-05 01:55:05] -rw------- 1 boinc boinc 183227903 Jun  5 01:54 HITS.pool.root.1
[2025-06-05 01:55:05] -rw------- 1 boinc boinc   1003520 Jun  5 01:55 result.tar.gz
01:55:07 (1021385): run_atlas exited; CPU time 41510.347589
01:55:07 (1021385): called boinc_finish(0)

</stderr_txt>
]]>

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