Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
21:27:37 (94489): wrapper (7.7.26015): starting
21:27:37 (94489): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 21:27:37] Arguments: --nthreads 12
[2025-06-04 21:27:37] Threads: 12
[2025-06-04 21:27:37] Checking for CVMFS
[2025-06-04 21:27:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 21:27:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 21:27:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 21:27:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 21:27:41] 2.12.7.0 29207 2448 82044 146795 1 56 2464201 4096000 18344 130560 17 32221514 99.999 658970 141 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 21:27:41] CVMFS is ok
[2025-06-04 21:27:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:27:41] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 21:27:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 21:27:41] Further information can be found at the LHC@home message board.
[2025-06-04 21:27:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:27:41] Checking for apptainer binary...
[2025-06-04 21:27:41] apptainer is not installed, using version from CVMFS
[2025-06-04 21:27:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:27:41] epyc7v12
[2025-06-04 21:27:41] apptainer works
[2025-06-04 21:27:41] Set ATHENA_PROC_NUMBER=12
[2025-06-04 21:27:41] Set ATHENA_CORE_NUMBER=12
[2025-06-04 21:27:42] Starting ATLAS job with PandaID=6677621298
[2025-06-04 21:27:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:02:34]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:02:34] 2025-06-05 00:02:19,951 | INFO     | sum of deviations: 110279893809.00005
[2025-06-05 00:02:34] 2025-06-05 00:02:19,951 | INFO     | mean x: 1749077336.0769231
[2025-06-05 00:02:34] 2025-06-05 00:02:19,951 | INFO     | mean y: 2420710.1818181816
[2025-06-05 00:02:34] 2025-06-05 00:02:19,951 | INFO     | -- intersect: -212746859259.41287
[2025-06-05 00:02:34] 2025-06-05 00:02:19,951 | INFO     | intersect: -212746859259.41287
[2025-06-05 00:02:34] 2025-06-05 00:02:19,951 | INFO     | chi2: 10.307607485050138
[2025-06-05 00:02:34] 2025-06-05 00:02:19,952 | INFO     | sum of square deviations: 814823339.62319
[2025-06-05 00:02:34] 2025-06-05 00:02:19,953 | INFO     | sum of deviations: 115139121688.1304
[2025-06-05 00:02:34] 2025-06-05 00:02:19,953 | INFO     | mean x: 1749077183.5797102
[2025-06-05 00:02:34] 2025-06-05 00:02:19,953 | INFO     | mean y: 2428327.2608695654
[2025-06-05 00:02:34] 2025-06-05 00:02:19,953 | INFO     | -- intersect: -247152017169.16653
[2025-06-05 00:02:34] 2025-06-05 00:02:19,953 | INFO     | intersect: -247152017169.16653
[2025-06-05 00:02:34] 2025-06-05 00:02:19,953 | INFO     | chi2: 9.674244352415469
[2025-06-05 00:02:34] 2025-06-05 00:02:19,953 | INFO     | current chi2=9.674244352415469 (change=6.144618269111243 %)
[2025-06-05 00:02:34] 2025-06-05 00:02:19,954 | INFO     | right removable region: 137
[2025-06-05 00:02:34] 2025-06-05 00:02:19,954 | INFO     | sum of square deviations: 814816629.62319
[2025-06-05 00:02:34] 2025-06-05 00:02:19,955 | INFO     | sum of deviations: 58979167160.02901
[2025-06-05 00:02:34] 2025-06-05 00:02:19,955 | INFO     | mean x: 1749077488.5797102
[2025-06-05 00:02:34] 2025-06-05 00:02:19,955 | INFO     | mean y: 2505890.224637681
[2025-06-05 00:02:34] 2025-06-05 00:02:19,955 | INFO     | -- intersect: -126601603334.31604
[2025-06-05 00:02:34] 2025-06-05 00:02:19,955 | INFO     | intersect: -126601603334.31604
[2025-06-05 00:02:34] 2025-06-05 00:02:19,955 | INFO     | chi2: 4.544876103990883
[2025-06-05 00:02:34] 2025-06-05 00:02:19,956 | INFO     | current chi2=4.544876103990883 (change=55.907555554645995 %)
[2025-06-05 00:02:34] 2025-06-05 00:02:19,956 | INFO     | sum of square deviations: 729407022.090226
[2025-06-05 00:02:34] 2025-06-05 00:02:19,957 | INFO     | sum of deviations: 19092758163.1579
[2025-06-05 00:02:34] 2025-06-05 00:02:19,957 | INFO     | mean x: 1749077641.0827067
[2025-06-05 00:02:34] 2025-06-05 00:02:19,957 | INFO     | mean y: 2576970.8947368423
[2025-06-05 00:02:34] 2025-06-05 00:02:19,957 | INFO     | -- intersect: -45780799660.27781
[2025-06-05 00:02:34] 2025-06-05 00:02:19,957 | INFO     | intersect: -45780799660.27781
[2025-06-05 00:02:34] 2025-06-05 00:02:19,957 | INFO     | chi2: 1.492241757341429
[2025-06-05 00:02:34] 2025-06-05 00:02:19,957 | INFO     | current chi2=1.492241757341429 (change=67.16650304216031 %)
[2025-06-05 00:02:34] 2025-06-05 00:02:19,958 | INFO     | sum of square deviations: 650183577.0546875
[2025-06-05 00:02:34] 2025-06-05 00:02:19,958 | INFO     | sum of deviations: 350583024.4765625
[2025-06-05 00:02:34] 2025-06-05 00:02:19,959 | INFO     | mean x: 1749077793.5859375
[2025-06-05 00:02:34] 2025-06-05 00:02:19,959 | INFO     | mean y: 2612834.8203125
[2025-06-05 00:02:34] 2025-06-05 00:02:19,959 | INFO     | -- intersect: -940500778.8730924
[2025-06-05 00:02:34] 2025-06-05 00:02:19,959 | INFO     | intersect: -940500778.8730924
[2025-06-05 00:02:34] 2025-06-05 00:02:19,959 | INFO     | chi2: 0.8124728630973905
[2025-06-05 00:02:34] 2025-06-05 00:02:19,959 | INFO     | current chi2=0.8124728630973905 (change=45.5535365432416 %)
[2025-06-05 00:02:34] 2025-06-05 00:02:19,960 | INFO     | sum of square deviations: 576921417.1869906
[2025-06-05 00:02:34] 2025-06-05 00:02:19,960 | INFO     | sum of deviations: -4548617704.804878
[2025-06-05 00:02:34] 2025-06-05 00:02:19,960 | INFO     | mean x: 1749077946.0813007
[2025-06-05 00:02:34] 2025-06-05 00:02:19,960 | INFO     | mean y: 2622852.7804878047
[2025-06-05 00:02:34] 2025-06-05 00:02:19,961 | INFO     | -- intersect: 13792866507.490416
[2025-06-05 00:02:34] 2025-06-05 00:02:19,961 | INFO     | intersect: 13792866507.490416
[2025-06-05 00:02:34] 2025-06-05 00:02:19,961 | INFO     | chi2: 0.7347075550764401
[2025-06-05 00:02:34] 2025-06-05 00:02:19,961 | INFO     | current chi2=0.7347075550764401 (change=9.571434512223052 %)
[2025-06-05 00:02:34] 2025-06-05 00:02:19,961 | INFO     | left removable region: 40
[2025-06-05 00:02:34] 2025-06-05 00:02:19,961 | INFO     | sum of square deviations: 282974608.0
[2025-06-05 00:02:34] 2025-06-05 00:02:19,962 | INFO     | sum of deviations: 1782977235.0000002
[2025-06-05 00:02:34] 2025-06-05 00:02:19,962 | INFO     | mean x: 1749078373.0
[2025-06-05 00:02:34] 2025-06-05 00:02:19,962 | INFO     | mean y: 2644594.2783505153
[2025-06-05 00:02:34] 2025-06-05 00:02:19,962 | INFO     | -- intersect: -11018015327.582338
[2025-06-05 00:02:34] 2025-06-05 00:02:19,962 | INFO     | intersect: -11018015327.582338
[2025-06-05 00:02:34] 2025-06-05 00:02:19,963 | INFO     | chi2: 3.6724766748595255e-05
[2025-06-05 00:02:34] 2025-06-05 00:02:19,963 | INFO     | -- intersect: -11018015327.582338
[2025-06-05 00:02:34] 2025-06-05 00:02:19,963 | INFO     | current memory leak: 6.30 B/s (using 97 data points, chi2=0.00)
[2025-06-05 00:02:34] 2025-06-05 00:02:19,963 | INFO     | ..............................
[2025-06-05 00:02:34] 2025-06-05 00:02:19,964 | INFO     | . Timing measurements:
[2025-06-05 00:02:34] 2025-06-05 00:02:19,964 | INFO     | . get job = 0 s
[2025-06-05 00:02:34] 2025-06-05 00:02:19,964 | INFO     | . initial setup = 8 s
[2025-06-05 00:02:34] 2025-06-05 00:02:19,964 | INFO     | . payload setup = 149 s
[2025-06-05 00:02:34] 2025-06-05 00:02:19,964 | INFO     | . stage-in = 0 s
[2025-06-05 00:02:34] 2025-06-05 00:02:19,964 | INFO     | . payload execution = 8744 s
[2025-06-05 00:02:34] 2025-06-05 00:02:19,964 | INFO     | . stage-out = 2 s
[2025-06-05 00:02:34] 2025-06-05 00:02:19,964 | INFO     | . log creation = 0 s
[2025-06-05 00:02:34] 2025-06-05 00:02:19,964 | INFO     | ..............................
[2025-06-05 00:02:34] 2025-06-05 00:02:20,073 | INFO     | 
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | job summary report
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | --------------------------------------------------
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | PanDA job id: 6677621298
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | task id: 45006595
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | errors: (none)
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | pilot state: finished 
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | transexitcode: 0
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | exeerrorcode: 0
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | exeerrordiag: 
[2025-06-05 00:02:34] 2025-06-05 00:02:20,074 | INFO     | exitcode: 0
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | exitmsg: OK
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | cpuconsumptiontime: 39394 s
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | nevents: 400
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | neventsw: 0
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | pid: 350082
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | pgrp: 350082
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | corecount: 12
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | event service: False
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | sizes: {0: 2396514, 1: 2397223, 2: 2397422, 3: 2397450, 14: 2397450, 25: 2397478, 36: 2397634, 46: 2397662, 57: 2397690, 68: 2397718, 79: 2397746, 81: 2398288, 90:
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | --------------------------------------------------
[2025-06-05 00:02:34] 2025-06-05 00:02:20,075 | INFO     | 
[2025-06-05 00:02:34] 2025-06-05 00:02:20,076 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/13
[2025-06-05 00:02:34] 2025-06-05 00:02:20,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,100 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,100 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,100 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:02:34] 2025-06-05 00:02:20,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,102 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:02:34] 2025-06-05 00:02:20,102 | INFO     | job 6677621298 has completed (purged errors)
[2025-06-05 00:02:34] 2025-06-05 00:02:20,102 | INFO     | overall cleanup function is called
[2025-06-05 00:02:34] 2025-06-05 00:02:21,109 | INFO     | --- collectZombieJob: --- 10, [350082]
[2025-06-05 00:02:34] 2025-06-05 00:02:21,110 | INFO     | zombie collector waiting for pid 350082
[2025-06-05 00:02:34] 2025-06-05 00:02:21,110 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:02:34] 2025-06-05 00:02:21,110 | INFO     | collected zombie processes
[2025-06-05 00:02:34] 2025-06-05 00:02:21,110 | INFO     | will attempt to kill all subprocesses of pid=350082
[2025-06-05 00:02:34] 2025-06-05 00:02:21,604 | INFO     | process IDs to be killed: [350082] (in reverse order)
[2025-06-05 00:02:34] 2025-06-05 00:02:21,793 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:02:34] 2025-06-05 00:02:21,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:02:34] 2025-06-05 00:02:21,810 | INFO     | did not find any defunct processes belonging to 350082
[2025-06-05 00:02:34] 2025-06-05 00:02:21,825 | INFO     | did not find any defunct processes belonging to 350082
[2025-06-05 00:02:34] 2025-06-05 00:02:21,825 | INFO     | ready for new job
[2025-06-05 00:02:34] 2025-06-05 00:02:21,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:02:34] 2025-06-05 00:02:21,827 | INFO     | **************************************
[2025-06-05 00:02:34] 2025-06-05 00:02:21,827 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:02:34] 2025-06-05 00:02:21,828 | INFO     | **************************************
[2025-06-05 00:02:34] 2025-06-05 00:02:21,828 | INFO     | 
[2025-06-05 00:02:34] 2025-06-05 00:02:21,855 | INFO     | architecture information:
[2025-06-05 00:02:34] 2025-06-05 00:02:21,855 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:02:34] 2025-06-05 00:02:21,871 | INFO     | cat /etc/os-release:
[2025-06-05 00:02:34] NAME="CentOS Linux"
[2025-06-05 00:02:34] VERSION="7 (Core)"
[2025-06-05 00:02:34] ID="centos"
[2025-06-05 00:02:34] ID_LIKE="rhel fedora"
[2025-06-05 00:02:34] VERSION_ID="7"
[2025-06-05 00:02:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:02:34] ANSI_COLOR="0;31"
[2025-06-05 00:02:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:02:34] HOME_URL="https://www.centos.org/"
[2025-06-05 00:02:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:02:34] 
[2025-06-05 00:02:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:02:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:02:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:02:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:02:34] 
[2025-06-05 00:02:34] 2025-06-05 00:02:21,871 | INFO     | **************************************
[2025-06-05 00:02:34] 2025-06-05 00:02:22,374 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/13
[2025-06-05 00:02:34] 2025-06-05 00:02:22,390 | INFO     | sufficient remaining disk space (330465017856 B)
[2025-06-05 00:02:34] 2025-06-05 00:02:22,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:02:34] 2025-06-05 00:02:22,391 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:02:34] 2025-06-05 00:02:22,391 | INFO     | update_server=False
[2025-06-05 00:02:34] 2025-06-05 00:02:22,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:02:34] 2025-06-05 00:02:22,391 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 00:02:34] 2025-06-05 00:02:22,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:02:34] 2025-06-05 00:02:22,392 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:02:34] 2025-06-05 00:02:22,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:02:34] 2025-06-05 00:02:22,392 | INFO     | aborting loop
[2025-06-05 00:02:34] 2025-06-05 00:02:22,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:02:34] 2025-06-05 00:02:22,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:02:34] 2025-06-05 00:02:22,653 | INFO     | all data control threads have been joined
[2025-06-05 00:02:34] 2025-06-05 00:02:22,803 | INFO     | all payload control threads have been joined
[2025-06-05 00:02:34] 2025-06-05 00:02:23,056 | INFO     | all job control threads have been joined
[2025-06-05 00:02:34] 2025-06-05 00:02:23,393 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:23,395 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:23,434 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:23,657 | INFO     | [data] control thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:23,674 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:23,809 | INFO     | [payload] control thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:23,874 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:23,933 | INFO     | [job] validate thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:24,061 | INFO     | [job] control thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:24,137 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:24,265 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:24,412 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:24,735 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:24,881 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:25,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:02:34] 2025-06-05 00:02:25,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:02:34] 2025-06-05 00:02:26,085 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:29,229 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:02:34] 2025-06-05 00:02:29,275 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359775704896)>', '<ExcThread(monitor, started 140359262795520)>']
[2025-06-05 00:02:34] 2025-06-05 00:02:29,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:02:34] 2025-06-05 00:02:29,427 | INFO     | [monitor] control thread has ended
[2025-06-05 00:02:34] 2025-06-05 00:02:34,300 | INFO     | all workflow threads have been joined
[2025-06-05 00:02:34] 2025-06-05 00:02:34,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:02:34] 2025-06-05 00:02:34,301 | INFO     | traces error code: 0
[2025-06-05 00:02:34] 2025-06-05 00:02:34,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:02:34] 2025-06-05 00:02:34,424 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:02:34] 2025-06-05 00:02:34,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:02:34] 2025-06-05 00:02:34,432 [wrapper] pilotpid: 180589
[2025-06-05 00:02:34] 2025-06-05 00:02:34,435 [wrapper] Pilot exit status: 0
[2025-06-05 00:02:34] 2025-06-05 00:02:34,446 [wrapper] pandaids: 6677621298
[2025-06-05 00:02:34] 2025-06-05 00:02:34,546 [wrapper] cleanup supervisor_pilot  867671 180590
[2025-06-05 00:02:34] 2025-06-05 00:02:34,550 [wrapper] Test setup, not cleaning
[2025-06-05 00:02:34] 2025-06-05 00:02:34,552 [wrapper] apfmon messages muted
[2025-06-05 00:02:34] 2025-06-05 00:02:34,555 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:02:34] 2025-06-05 00:02:34,558 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:02:34]  *** Error codes and diagnostics ***
[2025-06-05 00:02:34]     "exeErrorCode": 0,
[2025-06-05 00:02:34]     "exeErrorDiag": "",
[2025-06-05 00:02:34]     "pilotErrorCode": 0,
[2025-06-05 00:02:34]     "pilotErrorDiag": "",
[2025-06-05 00:02:34]  *** Listing of results directory ***
[2025-06-05 00:02:34] total 387416
[2025-06-05 00:02:34] -rw-r--r-- 1 boinc boinc    495897 Jun  3 12:59 pilot3.tar.gz
[2025-06-05 00:02:34] -rw-r--r-- 1 boinc boinc      5111 Jun  3 13:09 queuedata.json
[2025-06-05 00:02:34] -rwx------ 1 boinc boinc     37140 Jun  3 13:10 runpilot2-wrapper.sh
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc       100 Jun  4 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:02:34] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 21:27 run_atlas
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc       105 Jun  4 21:27 job.xml
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc      6933 Jun  4 21:27 init_data.xml
[2025-06-05 00:02:34] -rw-r--r-- 2 boinc boinc 212937015 Jun  4 21:27 EVNT.45006593._001348.pool.root.1
[2025-06-05 00:02:34] -rw-r--r-- 2 boinc boinc     15093 Jun  4 21:27 start_atlas.sh
[2025-06-05 00:02:34] drwxrwx--x 2 boinc boinc      4096 Jun  4 21:27 shared
[2025-06-05 00:02:34] -rw-r--r-- 2 boinc boinc    508882 Jun  4 21:27 input.tar.gz
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc         0 Jun  4 21:27 boinc_lockfile
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc      2525 Jun  4 21:27 pandaJob.out
[2025-06-05 00:02:34] -rw------- 1 boinc boinc    987032 Jun  4 21:30 agis_schedconf.cvmfs.json
[2025-06-05 00:02:34] -rw------- 1 boinc boinc   1598969 Jun  4 21:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:02:34] drwx------ 4 boinc boinc      4096 Jun  4 21:30 pilot3
[2025-06-05 00:02:34] -rw------- 1 boinc boinc 177605023 Jun  5 00:00 HITS.45006595._033507.pool.root.1
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc       530 Jun  5 00:00 boinc_task_state.xml
[2025-06-05 00:02:34] -rw------- 1 boinc boinc      1021 Jun  5 00:01 memory_monitor_summary.json
[2025-06-05 00:02:34] -rw------- 1 boinc boinc    402301 Jun  5 00:01 log.45006595._033507.job.log.tgz.1
[2025-06-05 00:02:34] -rw------- 1 boinc boinc        95 Jun  5 00:02 pilot_heartbeat.json
[2025-06-05 00:02:34] -rw------- 1 boinc boinc      7649 Jun  5 00:02 heartbeat.json
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc        27 Jun  5 00:02 wrapper_checkpoint.txt
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 00:02 boinc_mmap_file
[2025-06-05 00:02:34] -rw------- 1 boinc boinc      4501 Jun  5 00:02 pilotlog.txt
[2025-06-05 00:02:34] -rw------- 1 boinc boinc    766930 Jun  5 00:02 log.45006595._033507.job.log.1
[2025-06-05 00:02:34] -rw------- 1 boinc boinc       357 Jun  5 00:02 output.list
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc       620 Jun  5 00:02 runtime_log
[2025-06-05 00:02:34] -rw------- 1 boinc boinc   1187840 Jun  5 00:02 result.tar.gz
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc      8977 Jun  5 00:02 runtime_log.err
[2025-06-05 00:02:34] -rw------- 1 boinc boinc       652 Jun  5 00:02 lvXMDmBagg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaGkKDmSbr8Tm.diag
[2025-06-05 00:02:34] -rw-rw-r-- 1 boinc boinc     21013 Jun  5 00:02 stderr.txt
[2025-06-05 00:02:34] HITS file was successfully produced:
[2025-06-05 00:02:34] -rw------- 1 boinc boinc 177605023 Jun  5 00:00 shared/HITS.pool.root.1
[2025-06-05 00:02:34]  *** Contents of shared directory: ***
[2025-06-05 00:02:34] total 383076
[2025-06-05 00:02:34] -rw-r--r-- 2 boinc boinc 212937015 Jun  4 21:27 ATLAS.root_0
[2025-06-05 00:02:34] -rw-r--r-- 2 boinc boinc     15093 Jun  4 21:27 start_atlas.sh
[2025-06-05 00:02:34] -rw-r--r-- 2 boinc boinc    508882 Jun  4 21:27 input.tar.gz
[2025-06-05 00:02:34] -rw------- 1 boinc boinc 177605023 Jun  5 00:00 HITS.pool.root.1
[2025-06-05 00:02:34] -rw------- 1 boinc boinc   1187840 Jun  5 00:02 result.tar.gz
00:02:35 (94489): run_atlas exited; CPU time 39921.627260
00:02:35 (94489): called boinc_finish(0)

</stderr_txt>
]]>

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