Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:24:32 (1085193): wrapper (7.7.26015): starting
07:24:32 (1085193): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 07:24:32] Arguments: --nthreads 12
[2025-06-05 07:24:32] Threads: 12
[2025-06-05 07:24:32] Checking for CVMFS
[2025-06-05 07:24:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 07:24:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 07:24:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 07:24:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 07:24:36] 2.12.7.0 16265 2874 64164 146810 1 187 2259344 4096000 912 130560 0 2882349 99.992 711083 163 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 07:24:36] CVMFS is ok
[2025-06-05 07:24:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:24:36] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 07:24:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 07:24:36] Further information can be found at the LHC@home message board.
[2025-06-05 07:24:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:24:36] Checking for apptainer binary...
[2025-06-05 07:24:36] apptainer is not installed, using version from CVMFS
[2025-06-05 07:24:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:24:37] gg3250
[2025-06-05 07:24:37] apptainer works
[2025-06-05 07:24:37] Set ATHENA_PROC_NUMBER=12
[2025-06-05 07:24:37] Set ATHENA_CORE_NUMBER=12
[2025-06-05 07:24:37] Starting ATLAS job with PandaID=6677782247
[2025-06-05 07:24:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 10:00:36]  *** The last 200 lines of the pilot log: ***
[2025-06-05 10:00:36] 2025-06-05 10:00:23,311 | INFO     | mean x: 1749113049.0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,311 | INFO     | mean y: 2640396.510067114
[2025-06-05 10:00:36] 2025-06-05 10:00:23,311 | INFO     | -- intersect: -51157814213.35763
[2025-06-05 10:00:36] 2025-06-05 10:00:23,311 | INFO     | intersect: -51157814213.35763
[2025-06-05 10:00:36] 2025-06-05 10:00:23,311 | INFO     | chi2: 2.7558635314851503
[2025-06-05 10:00:36] 2025-06-05 10:00:23,312 | INFO     | sum of square deviations: 925859220.0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,312 | INFO     | sum of deviations: 28812383882.0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,312 | INFO     | mean x: 1749112896.5
[2025-06-05 10:00:36] 2025-06-05 10:00:23,312 | INFO     | mean y: 2638584.527777778
[2025-06-05 10:00:36] 2025-06-05 10:00:23,312 | INFO     | -- intersect: -54429084012.472374
[2025-06-05 10:00:36] 2025-06-05 10:00:23,312 | INFO     | intersect: -54429084012.472374
[2025-06-05 10:00:36] 2025-06-05 10:00:23,312 | INFO     | chi2: 2.7608296962286984
[2025-06-05 10:00:36] 2025-06-05 10:00:23,312 | INFO     | current chi2=2.7608296962286984 (change=-0.18020357999628045 %)
[2025-06-05 10:00:36] 2025-06-05 10:00:23,312 | INFO     | right removable region: 143
[2025-06-05 10:00:36] 2025-06-05 10:00:23,312 | INFO     | sum of square deviations: 925859220.0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,313 | INFO     | sum of deviations: -7702274525.500001
[2025-06-05 10:00:36] 2025-06-05 10:00:23,313 | INFO     | mean x: 1749113201.5
[2025-06-05 10:00:36] 2025-06-05 10:00:23,313 | INFO     | mean y: 2697515.284722222
[2025-06-05 10:00:36] 2025-06-05 10:00:23,313 | INFO     | -- intersect: 14553667860.570261
[2025-06-05 10:00:36] 2025-06-05 10:00:23,313 | INFO     | intersect: 14553667860.570261
[2025-06-05 10:00:36] 2025-06-05 10:00:23,313 | INFO     | chi2: 0.18712969571587226
[2025-06-05 10:00:36] 2025-06-05 10:00:23,313 | INFO     | current chi2=0.18712969571587226 (change=93.20976189212726 %)
[2025-06-05 10:00:36] 2025-06-05 10:00:23,313 | INFO     | sum of square deviations: 832722590.0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,313 | INFO     | sum of deviations: -15120724103.000004
[2025-06-05 10:00:36] 2025-06-05 10:00:23,313 | INFO     | mean x: 1749113354.0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | mean y: 2709529.870503597
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | -- intersect: 31763419240.780323
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | intersect: 31763419240.780323
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | chi2: 0.050232474740955754
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | current chi2=0.050232474740955754 (change=73.15633173623814 %)
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | sum of square deviations: 746051197.5
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | sum of deviations: -13120849167.999998
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | mean x: 1749113506.5
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | mean y: 2705996.6119402987
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | -- intersect: 30764474858.32345
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | intersect: 30764474858.32345
[2025-06-05 10:00:36] 2025-06-05 10:00:23,314 | INFO     | chi2: 0.049711073276972106
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | current chi2=0.049711073276972106 (change=1.0379768599346682 %)
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | left removable region: 30
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | sum of square deviations: 447383272.0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | sum of deviations: -4617609781.000001
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | mean x: 1749113781.0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | mean y: 2688317.371681416
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | -- intersect: 18055944683.26346
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | intersect: 18055944683.26346
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | chi2: 0.030548993246169075
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | -- intersect: 18055944683.26346
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | current memory leak: -10.32 B/s (using 113 data points, chi2=0.03)
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | ..............................
[2025-06-05 10:00:36] 2025-06-05 10:00:23,315 | INFO     | . Timing measurements:
[2025-06-05 10:00:36] 2025-06-05 10:00:23,316 | INFO     | . get job = 0 s
[2025-06-05 10:00:36] 2025-06-05 10:00:23,316 | INFO     | . initial setup = 5 s
[2025-06-05 10:00:36] 2025-06-05 10:00:23,316 | INFO     | . payload setup = 63 s
[2025-06-05 10:00:36] 2025-06-05 10:00:23,316 | INFO     | . stage-in = 0 s
[2025-06-05 10:00:36] 2025-06-05 10:00:23,316 | INFO     | . payload execution = 9113 s
[2025-06-05 10:00:36] 2025-06-05 10:00:23,316 | INFO     | . stage-out = 0 s
[2025-06-05 10:00:36] 2025-06-05 10:00:23,316 | INFO     | . log creation = 0 s
[2025-06-05 10:00:36] 2025-06-05 10:00:23,316 | INFO     | ..............................
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | 
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | job summary report
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | --------------------------------------------------
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | PanDA job id: 6677782247
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | task id: 45006595
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | errors: (none)
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | pilot state: finished 
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | transexitcode: 0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | exeerrorcode: 0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,353 | INFO     | exeerrordiag: 
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | exitcode: 0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | exitmsg: OK
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | cpuconsumptiontime: 35632 s
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | nevents: 400
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | neventsw: 0
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | pid: 1095270
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | pgrp: 1095270
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | corecount: 12
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | event service: False
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | sizes: {0: 2396463, 1: 2397171, 2: 2397370, 13: 2397370, 23: 2397426, 34: 2397454, 41: 2397816, 45: 2397844, 9181: 2425898, 9183: 2434941, 9187: 2435055}
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | --------------------------------------------------
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | 
[2025-06-05 10:00:36] 2025-06-05 10:00:23,354 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 10:00:36] 2025-06-05 10:00:23,363 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,363 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | job 6677782247 has completed (purged errors)
[2025-06-05 10:00:36] 2025-06-05 10:00:23,364 | INFO     | overall cleanup function is called
[2025-06-05 10:00:36] 2025-06-05 10:00:23,890 | WARNING  | process 1095270 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 10:00:36] 2025-06-05 10:00:23,932 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 10:00:36] 2025-06-05 10:00:23,933 | INFO     | skipping file size check of payload stdout file (/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6677782247/payload.stdout) since it has not been created
[2025-06-05 10:00:36] 2025-06-05 10:00:23,933 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 10:00:36] 2025-06-05 10:00:23,939 | INFO     | sufficient remaining disk space (71224524800 B)
[2025-06-05 10:00:36] 2025-06-05 10:00:23,939 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-05 10:00:36] 2025-06-05 10:00:23,940 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6677782247/HITS.45006595._038791.pool.root.1 since it does n
[2025-06-05 10:00:36] 2025-06-05 10:00:23,979 | INFO     | number of running child processes to parent process 1095270: 1
[2025-06-05 10:00:36] 2025-06-05 10:00:23,979 | INFO     | maximum number of monitored processes: 6
[2025-06-05 10:00:36] 2025-06-05 10:00:23,979 | INFO     | aborting job monitoring since job object (job id=6677782247) has expired
[2025-06-05 10:00:36] 2025-06-05 10:00:24,369 | INFO     | --- collectZombieJob: --- 10, [1095270]
[2025-06-05 10:00:36] 2025-06-05 10:00:24,369 | INFO     | zombie collector waiting for pid 1095270
[2025-06-05 10:00:36] 2025-06-05 10:00:24,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 10:00:36] 2025-06-05 10:00:24,369 | INFO     | collected zombie processes
[2025-06-05 10:00:36] 2025-06-05 10:00:24,369 | INFO     | will attempt to kill all subprocesses of pid=1095270
[2025-06-05 10:00:36] 2025-06-05 10:00:24,422 | INFO     | process IDs to be killed: [1095270] (in reverse order)
[2025-06-05 10:00:36] 2025-06-05 10:00:24,441 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 10:00:36] 2025-06-05 10:00:24,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 10:00:36] 2025-06-05 10:00:24,442 | INFO     | did not find any defunct processes belonging to 1095270
[2025-06-05 10:00:36] 2025-06-05 10:00:24,443 | INFO     | did not find any defunct processes belonging to 1095270
[2025-06-05 10:00:36] 2025-06-05 10:00:24,443 | INFO     | ready for new job
[2025-06-05 10:00:36] 2025-06-05 10:00:24,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 10:00:36] 2025-06-05 10:00:24,444 | INFO     | **************************************
[2025-06-05 10:00:36] 2025-06-05 10:00:24,444 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 10:00:36] 2025-06-05 10:00:24,444 | INFO     | **************************************
[2025-06-05 10:00:36] 2025-06-05 10:00:24,444 | INFO     | 
[2025-06-05 10:00:36] 2025-06-05 10:00:24,463 | INFO     | architecture information:
[2025-06-05 10:00:36] 2025-06-05 10:00:24,463 | INFO     | executing command: cat /etc/os-release
[2025-06-05 10:00:36] 2025-06-05 10:00:24,468 | INFO     | cat /etc/os-release:
[2025-06-05 10:00:36] NAME="CentOS Linux"
[2025-06-05 10:00:36] VERSION="7 (Core)"
[2025-06-05 10:00:36] ID="centos"
[2025-06-05 10:00:36] ID_LIKE="rhel fedora"
[2025-06-05 10:00:36] VERSION_ID="7"
[2025-06-05 10:00:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 10:00:36] ANSI_COLOR="0;31"
[2025-06-05 10:00:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 10:00:36] HOME_URL="https://www.centos.org/"
[2025-06-05 10:00:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 10:00:36] 
[2025-06-05 10:00:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 10:00:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 10:00:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 10:00:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 10:00:36] 
[2025-06-05 10:00:36] 2025-06-05 10:00:24,468 | INFO     | **************************************
[2025-06-05 10:00:36] 2025-06-05 10:00:24,972 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 10:00:36] 2025-06-05 10:00:24,981 | INFO     | sufficient remaining disk space (71224524800 B)
[2025-06-05 10:00:36] 2025-06-05 10:00:24,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 10:00:36] 2025-06-05 10:00:24,981 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 10:00:36] 2025-06-05 10:00:24,981 | INFO     | update_server=False
[2025-06-05 10:00:36] 2025-06-05 10:00:24,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 10:00:36] 2025-06-05 10:00:24,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:00:36] 2025-06-05 10:00:24,981 | INFO     | aborting loop
[2025-06-05 10:00:36] 2025-06-05 10:00:24,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 10:00:36] 2025-06-05 10:00:24,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:00:36] 2025-06-05 10:00:25,270 | INFO     | all job control threads have been joined
[2025-06-05 10:00:36] 2025-06-05 10:00:25,280 | INFO     | all payload control threads have been joined
[2025-06-05 10:00:36] 2025-06-05 10:00:25,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 10:00:36] 2025-06-05 10:00:25,609 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 10:00:36] 2025-06-05 10:00:25,610 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 10:00:36] 2025-06-05 10:00:25,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 10:00:36] 2025-06-05 10:00:25,683 | INFO     | all data control threads have been joined
[2025-06-05 10:00:36] 2025-06-05 10:00:25,983 | INFO     | [job] job monitor thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:25,986 | INFO     | [job] queue monitor thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:25,987 | INFO     | [job] retrieve thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,027 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,275 | INFO     | [job] control thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,285 | INFO     | [payload] control thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,358 | INFO     | [job] validate thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,383 | INFO     | [data] copytool_in thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,537 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,577 | INFO     | [payload] validate_post thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,688 | INFO     | [data] control thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,987 | INFO     | [data] copytool_out thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:26,991 | INFO     | [payload] failed_post thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:27,158 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:29,457 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 10:00:36] 2025-06-05 10:00:31,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139625290139456)>', '<ExcThread(monitor, started 139624974358272)>']
[2025-06-05 10:00:36] 2025-06-05 10:00:31,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 10:00:36] 2025-06-05 10:00:31,640 | INFO     | [monitor] control thread has ended
[2025-06-05 10:00:36] 2025-06-05 10:00:36,389 | INFO     | all workflow threads have been joined
[2025-06-05 10:00:36] 2025-06-05 10:00:36,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 10:00:36] 2025-06-05 10:00:36,390 | INFO     | traces error code: 0
[2025-06-05 10:00:36] 2025-06-05 10:00:36,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 10:00:36] 2025-06-05 10:00:36,499 [wrapper] ==== pilot stdout END ====
[2025-06-05 10:00:36] 2025-06-05 10:00:36,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 10:00:36] 2025-06-05 10:00:36,503 [wrapper] pilotpid: 1088804
[2025-06-05 10:00:36] 2025-06-05 10:00:36,504 [wrapper] Pilot exit status: 0
[2025-06-05 10:00:36] 2025-06-05 10:00:36,510 [wrapper] pandaids: 6677782247
[2025-06-05 10:00:36] 2025-06-05 10:00:36,521 [wrapper] cleanup supervisor_pilot 1119882 1088805
[2025-06-05 10:00:36] 2025-06-05 10:00:36,523 [wrapper] Test setup, not cleaning
[2025-06-05 10:00:36] 2025-06-05 10:00:36,524 [wrapper] apfmon messages muted
[2025-06-05 10:00:36] 2025-06-05 10:00:36,526 [wrapper] ==== wrapper stdout END ====
[2025-06-05 10:00:36] 2025-06-05 10:00:36,527 [wrapper] ==== wrapper stderr END ====
[2025-06-05 10:00:36]  *** Error codes and diagnostics ***
[2025-06-05 10:00:36]     "exeErrorCode": 0,
[2025-06-05 10:00:36]     "exeErrorDiag": "",
[2025-06-05 10:00:36]     "pilotErrorCode": 0,
[2025-06-05 10:00:36]     "pilotErrorDiag": "",
[2025-06-05 10:00:36]  *** Listing of results directory ***
[2025-06-05 10:00:36] total 392192
[2025-06-05 10:00:36] -rw-r--r-- 1 boinc boinc    495897 Jun  3 16:31 pilot3.tar.gz
[2025-06-05 10:00:36] -rw-r--r-- 1 boinc boinc      5111 Jun  3 16:34 queuedata.json
[2025-06-05 10:00:36] -rwx------ 1 boinc boinc     37140 Jun  3 16:35 runpilot2-wrapper.sh
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc       100 Jun  5 07:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 10:00:36] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 07:24 run_atlas
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc       105 Jun  5 07:24 job.xml
[2025-06-05 10:00:36] -rw-r--r-- 2 boinc boinc 218456741 Jun  5 07:24 EVNT.45006593._001556.pool.root.1
[2025-06-05 10:00:36] -rw-r--r-- 2 boinc boinc     15093 Jun  5 07:24 start_atlas.sh
[2025-06-05 10:00:36] drwxrwx--x 2 boinc boinc      4096 Jun  5 07:24 shared
[2025-06-05 10:00:36] -rw-r--r-- 2 boinc boinc    508876 Jun  5 07:24 input.tar.gz
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc      9360 Jun  5 07:24 init_data.xml
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc         0 Jun  5 07:24 boinc_lockfile
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc      2524 Jun  5 07:24 pandaJob.out
[2025-06-05 10:00:36] -rw------- 1 boinc boinc    983087 Jun  5 07:25 agis_schedconf.cvmfs.json
[2025-06-05 10:00:36] -rw------- 1 boinc boinc   1598969 Jun  5 07:25 agis_ddmendpoints.agis.ALL.json
[2025-06-05 10:00:36] drwx------ 4 boinc boinc      4096 Jun  5 07:25 pilot3
[2025-06-05 10:00:36] -rw------- 1 boinc boinc 176728650 Jun  5 09:59 HITS.45006595._038791.pool.root.1
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc       529 Jun  5 09:59 boinc_task_state.xml
[2025-06-05 10:00:36] -rw------- 1 boinc boinc      1021 Jun  5 10:00 memory_monitor_summary.json
[2025-06-05 10:00:36] -rw------- 1 boinc boinc        95 Jun  5 10:00 pilot_heartbeat.json
[2025-06-05 10:00:36] -rw------- 1 boinc boinc    401247 Jun  5 10:00 log.45006595._038791.job.log.tgz.1
[2025-06-05 10:00:36] -rw------- 1 boinc boinc      7665 Jun  5 10:00 heartbeat.json
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 10:00 boinc_mmap_file
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc        27 Jun  5 10:00 wrapper_checkpoint.txt
[2025-06-05 10:00:36] -rw------- 1 boinc boinc      4376 Jun  5 10:00 pilotlog.txt
[2025-06-05 10:00:36] -rw------- 1 boinc boinc    892403 Jun  5 10:00 log.45006595._038791.job.log.1
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc       620 Jun  5 10:00 runtime_log
[2025-06-05 10:00:36] -rw------- 1 boinc boinc   1310720 Jun  5 10:00 result.tar.gz
[2025-06-05 10:00:36] -rw------- 1 boinc boinc       357 Jun  5 10:00 output.list
[2025-06-05 10:00:36] -rw------- 1 boinc boinc       649 Jun  5 10:00 X5kLDmEnjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgHZKDmWaBKAn.diag
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc      8953 Jun  5 10:00 runtime_log.err
[2025-06-05 10:00:36] -rw-rw-r-- 1 boinc boinc     21423 Jun  5 10:00 stderr.txt
[2025-06-05 10:00:36] HITS file was successfully produced:
[2025-06-05 10:00:36] -rw------- 1 boinc boinc 176728650 Jun  5 09:59 shared/HITS.pool.root.1
[2025-06-05 10:00:36]  *** Contents of shared directory: ***
[2025-06-05 10:00:36] total 387732
[2025-06-05 10:00:36] -rw-r--r-- 2 boinc boinc 218456741 Jun  5 07:24 ATLAS.root_0
[2025-06-05 10:00:36] -rw-r--r-- 2 boinc boinc     15093 Jun  5 07:24 start_atlas.sh
[2025-06-05 10:00:36] -rw-r--r-- 2 boinc boinc    508876 Jun  5 07:24 input.tar.gz
[2025-06-05 10:00:36] -rw------- 1 boinc boinc 176728650 Jun  5 09:59 HITS.pool.root.1
[2025-06-05 10:00:36] -rw------- 1 boinc boinc   1310720 Jun  5 10:00 result.tar.gz
10:00:37 (1085193): run_atlas exited; CPU time 35703.763902
10:00:37 (1085193): called boinc_finish(0)

</stderr_txt>
]]>

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