Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:54:34 (23745): wrapper (7.7.26015): starting
10:54:34 (23745): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:54:34] Arguments: --nthreads 8
[2025-06-04 10:54:34] Threads: 8
[2025-06-04 10:54:34] Checking for CVMFS
[2025-06-04 10:54:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:54:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:54:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:54:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:54:37] 2.11.2.0 16161 32982 92108 146773 3 69 17702928 25165824 4293 130560 0 17526268 99.804 18690410 2134 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 10:54:37] CVMFS is ok
[2025-06-04 10:54:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:54:37] Checking for apptainer binary...
[2025-06-04 10:54:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:54:37] Running /usr/bin/apptainer --version
[2025-06-04 10:54:37] apptainer version 1.3.2-1.el7
[2025-06-04 10:54:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:05:23] cg-vwn420.simple-grid.lan
[2025-06-04 11:05:23] apptainer works
[2025-06-04 11:05:23] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:05:23] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:05:23] Starting ATLAS job with PandaID=6677762806
[2025-06-04 11:05:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:22:35]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:22:35] 2025-06-04 13:06:26,211 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6677762806/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:22:35] 2025-06-04 13:06:26,212 | INFO     | extracted standard info from prmon json
[2025-06-04 15:22:35] 2025-06-04 13:06:26,212 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:22:35] 2025-06-04 13:06:26,213 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:22:35] 2025-06-04 13:06:26,213 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:22:35] 2025-06-04 13:06:26,213 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:22:35] 2025-06-04 13:06:26,218 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:22:35] 2025-06-04 13:06:26,218 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,220 | INFO     | sum of deviations: 80577925112.0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,220 | INFO     | mean x: 1749035422.0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,220 | INFO     | mean y: 2431586.8533333335
[2025-06-04 15:22:35] 2025-06-04 13:06:26,221 | INFO     | -- intersect: -39899809248.992
[2025-06-04 15:22:35] 2025-06-04 13:06:26,221 | INFO     | intersect: -39899809248.992
[2025-06-04 15:22:35] 2025-06-04 13:06:26,221 | INFO     | chi2: 6.450719245699236
[2025-06-04 15:22:35] 2025-06-04 13:06:26,221 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,226 | INFO     | sum of deviations: 93408786471.49998
[2025-06-04 15:22:35] 2025-06-04 13:06:26,227 | INFO     | mean x: 1749035269.5
[2025-06-04 15:22:35] 2025-06-04 13:06:26,227 | INFO     | mean y: 2439906.340909091
[2025-06-04 15:22:35] 2025-06-04 13:06:26,227 | INFO     | -- intersect: -49479737702.64086
[2025-06-04 15:22:35] 2025-06-04 13:06:26,227 | INFO     | intersect: -49479737702.64086
[2025-06-04 15:22:35] 2025-06-04 13:06:26,227 | INFO     | chi2: 5.732190326907814
[2025-06-04 15:22:35] 2025-06-04 13:06:26,227 | INFO     | current chi2=5.732190326907814 (change=11.138741145345513 %)
[2025-06-04 15:22:35] 2025-06-04 13:06:26,227 | INFO     | right removable region: 219
[2025-06-04 15:22:35] 2025-06-04 13:06:26,228 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,230 | INFO     | sum of deviations: 3652227593.4999924
[2025-06-04 15:22:35] 2025-06-04 13:06:26,230 | INFO     | mean x: 1749035574.5
[2025-06-04 15:22:35] 2025-06-04 13:06:26,230 | INFO     | mean y: 2482479.577272727
[2025-06-04 15:22:35] 2025-06-04 13:06:26,230 | INFO     | -- intersect: -1932241359.4852133
[2025-06-04 15:22:35] 2025-06-04 13:06:26,230 | INFO     | intersect: -1932241359.4852133
[2025-06-04 15:22:35] 2025-06-04 13:06:26,230 | INFO     | chi2: 1.7570041334763205
[2025-06-04 15:22:35] 2025-06-04 13:06:26,230 | INFO     | current chi2=1.7570041334763205 (change=72.76266309919265 %)
[2025-06-04 15:22:35] 2025-06-04 13:06:26,231 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,232 | INFO     | sum of deviations: -27325423970.000008
[2025-06-04 15:22:35] 2025-06-04 13:06:26,233 | INFO     | mean x: 1749035727.0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,233 | INFO     | mean y: 2503812.665116279
[2025-06-04 15:22:35] 2025-06-04 13:06:26,233 | INFO     | -- intersect: 15511410443.742168
[2025-06-04 15:22:35] 2025-06-04 13:06:26,233 | INFO     | intersect: 15511410443.742168
[2025-06-04 15:22:35] 2025-06-04 13:06:26,233 | INFO     | chi2: 0.8506374940079139
[2025-06-04 15:22:35] 2025-06-04 13:06:26,233 | INFO     | current chi2=0.8506374940079139 (change=51.58591389737456 %)
[2025-06-04 15:22:35] 2025-06-04 13:06:26,234 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 15:22:35] 2025-06-04 13:06:26,235 | INFO     | sum of deviations: -31082798148.0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,238 | INFO     | mean x: 1749035879.5
[2025-06-04 15:22:35] 2025-06-04 13:06:26,238 | INFO     | mean y: 2506500.8285714285
[2025-06-04 15:22:35] 2025-06-04 13:06:26,238 | INFO     | -- intersect: 18934326501.04169
[2025-06-04 15:22:35] 2025-06-04 13:06:26,239 | INFO     | intersect: 18934326501.04169
[2025-06-04 15:22:35] 2025-06-04 13:06:26,239 | INFO     | chi2: 0.8157081466585121
[2025-06-04 15:22:35] 2025-06-04 13:06:26,239 | INFO     | current chi2=0.8157081466585121 (change=4.106255319739859 %)
[2025-06-04 15:22:35] 2025-06-04 13:06:26,239 | INFO     | left removable region: 30
[2025-06-04 15:22:35] 2025-06-04 13:06:26,240 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,241 | INFO     | sum of deviations: -12872256843.999998
[2025-06-04 15:22:35] 2025-06-04 13:06:26,241 | INFO     | mean x: 1749036154.0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,241 | INFO     | mean y: 2514048.4656084655
[2025-06-04 15:22:35] 2025-06-04 13:06:26,242 | INFO     | -- intersect: 10757300842.066195
[2025-06-04 15:22:35] 2025-06-04 13:06:26,242 | INFO     | intersect: 10757300842.066195
[2025-06-04 15:22:35] 2025-06-04 13:06:26,242 | INFO     | chi2: 0.024167177229606242
[2025-06-04 15:22:35] 2025-06-04 13:06:26,242 | INFO     | -- intersect: 10757300842.066195
[2025-06-04 15:22:35] 2025-06-04 13:06:26,242 | INFO     | current memory leak: -6.15 B/s (using 189 data points, chi2=0.02)
[2025-06-04 15:22:35] 2025-06-04 13:06:26,243 | INFO     | ..............................
[2025-06-04 15:22:35] 2025-06-04 13:06:26,243 | INFO     | . Timing measurements:
[2025-06-04 15:22:35] 2025-06-04 13:06:26,244 | INFO     | . get job = 0 s
[2025-06-04 15:22:35] 2025-06-04 13:06:26,244 | INFO     | . initial setup = 5 s
[2025-06-04 15:22:35] 2025-06-04 13:06:26,244 | INFO     | . payload setup = 157 s
[2025-06-04 15:22:35] 2025-06-04 13:06:26,244 | INFO     | . stage-in = 0 s
[2025-06-04 15:22:35] 2025-06-04 13:06:26,244 | INFO     | . payload execution = 13840 s
[2025-06-04 15:22:35] 2025-06-04 13:06:26,244 | INFO     | . stage-out = 3 s
[2025-06-04 15:22:35] 2025-06-04 13:06:26,244 | INFO     | . log creation = 1 s
[2025-06-04 15:22:35] 2025-06-04 13:06:26,244 | INFO     | ..............................
[2025-06-04 15:22:35] 2025-06-04 13:06:26,549 | INFO     | 
[2025-06-04 15:22:35] 2025-06-04 13:06:26,549 | INFO     | job summary report
[2025-06-04 15:22:35] 2025-06-04 13:06:26,549 | INFO     | --------------------------------------------------
[2025-06-04 15:22:35] 2025-06-04 13:06:26,549 | INFO     | PanDA job id: 6677762806
[2025-06-04 15:22:35] 2025-06-04 13:06:26,549 | INFO     | task id: 45006595
[2025-06-04 15:22:35] 2025-06-04 13:06:26,549 | INFO     | errors: (none)
[2025-06-04 15:22:35] 2025-06-04 13:06:26,549 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:22:35] 2025-06-04 13:06:26,549 | INFO     | pilot state: finished 
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | transexitcode: 0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | exeerrorcode: 0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | exeerrordiag: 
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | exitcode: 0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | exitmsg: OK
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | cpuconsumptiontime: 50774 s
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | nevents: 400
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | neventsw: 0
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | pid: 6043
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | pgrp: 6043
[2025-06-04 15:22:35] 2025-06-04 13:06:26,550 | INFO     | corecount: 8
[2025-06-04 15:22:35] 2025-06-04 13:06:26,551 | INFO     | event service: False
[2025-06-04 15:22:35] 2025-06-04 13:06:26,551 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 13: 2405240, 23: 2405296, 34: 2405324, 45: 2405480, 56: 2405508, 66: 2405536, 77: 2405564, 88: 2405620, 90: 2406134, 99
[2025-06-04 15:22:35] 2025-06-04 13:06:26,551 | INFO     | --------------------------------------------------
[2025-06-04 15:22:35] 2025-06-04 13:06:26,551 | INFO     | 
[2025-06-04 15:22:35] 2025-06-04 13:06:26,551 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 15:22:35] 2025-06-04 13:06:27,022 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,024 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,024 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,024 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,024 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,024 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,024 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:22:35] 2025-06-04 13:06:27,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,024 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:22:35] 2025-06-04 13:06:27,024 | INFO     | job 6677762806 has completed (purged errors)
[2025-06-04 15:22:35] 2025-06-04 13:06:27,024 | INFO     | overall cleanup function is called
[2025-06-04 15:22:35] 2025-06-04 13:06:28,039 | INFO     | --- collectZombieJob: --- 10, [6043]
[2025-06-04 15:22:35] 2025-06-04 13:06:28,039 | INFO     | zombie collector waiting for pid 6043
[2025-06-04 15:22:35] 2025-06-04 13:06:28,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:22:35] 2025-06-04 13:06:28,039 | INFO     | collected zombie processes
[2025-06-04 15:22:35] 2025-06-04 13:06:28,039 | INFO     | will attempt to kill all subprocesses of pid=6043
[2025-06-04 15:22:35] 2025-06-04 13:06:28,178 | INFO     | process IDs to be killed: [6043] (in reverse order)
[2025-06-04 15:22:35] 2025-06-04 13:06:29,081 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:22:35] 2025-06-04 13:06:29,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:22:35] 2025-06-04 13:06:29,085 | INFO     | did not find any defunct processes belonging to 6043
[2025-06-04 15:22:35] 2025-06-04 13:06:29,089 | INFO     | did not find any defunct processes belonging to 6043
[2025-06-04 15:22:35] 2025-06-04 13:06:29,089 | INFO     | ready for new job
[2025-06-04 15:22:35] 2025-06-04 13:06:29,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:22:35] 2025-06-04 13:06:29,091 | INFO     | **************************************
[2025-06-04 15:22:35] 2025-06-04 13:06:29,092 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:22:35] 2025-06-04 13:06:29,092 | INFO     | **************************************
[2025-06-04 15:22:35] 2025-06-04 13:06:29,092 | INFO     | 
[2025-06-04 15:22:35] 2025-06-04 13:06:29,093 | INFO     | pilot is running in a VM
[2025-06-04 15:22:35] 2025-06-04 13:06:29,093 | INFO     | architecture information:
[2025-06-04 15:22:35] 2025-06-04 13:06:29,094 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:22:35] 2025-06-04 13:06:29,342 | INFO     | cat /etc/os-release:
[2025-06-04 15:22:35] NAME="CentOS Linux"
[2025-06-04 15:22:35] VERSION="7 (Core)"
[2025-06-04 15:22:35] ID="centos"
[2025-06-04 15:22:35] ID_LIKE="rhel fedora"
[2025-06-04 15:22:35] VERSION_ID="7"
[2025-06-04 15:22:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:22:35] ANSI_COLOR="0;31"
[2025-06-04 15:22:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:22:35] HOME_URL="https://www.centos.org/"
[2025-06-04 15:22:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:22:35] 
[2025-06-04 15:22:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:22:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:22:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:22:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:22:35] 
[2025-06-04 15:22:35] 2025-06-04 13:06:29,343 | INFO     | **************************************
[2025-06-04 15:22:35] 2025-06-04 13:06:29,846 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 15:22:35] 2025-06-04 13:06:30,142 | INFO     | sufficient remaining disk space (495949185024 B)
[2025-06-04 15:22:35] 2025-06-04 13:06:30,143 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:22:35] 2025-06-04 13:06:30,143 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:22:35] 2025-06-04 13:06:30,143 | INFO     | update_server=False
[2025-06-04 15:22:35] 2025-06-04 13:06:30,143 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:22:35] 2025-06-04 13:06:30,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:22:35] 2025-06-04 13:06:30,146 | INFO     | aborting loop
[2025-06-04 15:22:35] 2025-06-04 13:06:30,212 | INFO     | all data control threads have been joined
[2025-06-04 15:22:35] 2025-06-04 13:06:30,286 | INFO     | all payload control threads have been joined
[2025-06-04 15:22:35] 2025-06-04 13:06:30,325 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:22:35] 2025-06-04 13:06:30,358 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:22:35] 2025-06-04 13:06:30,358 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:22:35] 2025-06-04 13:06:30,358 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:22:35] 2025-06-04 13:06:31,061 | INFO     | all job control threads have been joined
[2025-06-04 15:22:35] 2025-06-04 13:06:31,150 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:31,152 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:31,218 | INFO     | [data] control thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:31,292 | INFO     | [payload] control thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:31,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:31,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:22:35] 2025-06-04 13:06:31,547 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:31,559 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:31,841 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:31,882 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:32,067 | INFO     | [job] control thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:32,332 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:32,401 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:32,564 | INFO     | [job] validate thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:32,574 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:32,653 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:33,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:22:35] 2025-06-04 13:06:37,048 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:22:35] 2025-06-04 13:06:38,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140296547264320)>', '<ExcThread(monitor, started 140295953958656)>']
[2025-06-04 15:22:35] 2025-06-04 13:06:38,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:22:35] 2025-06-04 13:06:38,406 | INFO     | [monitor] control thread has ended
[2025-06-04 15:22:35] 2025-06-04 13:06:43,244 | INFO     | all workflow threads have been joined
[2025-06-04 15:22:35] 2025-06-04 13:06:43,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:22:35] 2025-06-04 13:06:43,244 | INFO     | traces error code: 0
[2025-06-04 15:22:35] 2025-06-04 13:06:43,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:22:35] 2025-06-04 13:06:43,539 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:22:35] 2025-06-04 13:06:43,560 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:22:35] 2025-06-04 13:06:43,652 [wrapper] pilotpid: 31808
[2025-06-04 15:22:35] 2025-06-04 13:06:43,715 [wrapper] Pilot exit status: 0
[2025-06-04 15:22:35] 2025-06-04 13:06:44,179 [wrapper] pandaids: 6677762806
[2025-06-04 15:22:35] 2025-06-04 13:06:45,200 [wrapper] cleanup supervisor_pilot 11248 31809
[2025-06-04 15:22:35] 2025-06-04 13:06:45,293 [wrapper] Test setup, not cleaning
[2025-06-04 15:22:35] 2025-06-04 13:06:45,368 [wrapper] apfmon messages muted
[2025-06-04 15:22:35] 2025-06-04 13:06:45,447 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:22:35] 2025-06-04 13:06:45,522 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:22:35]  *** Error codes and diagnostics ***
[2025-06-04 15:22:35]     "exeErrorCode": 0,
[2025-06-04 15:22:35]     "exeErrorDiag": "",
[2025-06-04 15:22:35]     "pilotErrorCode": 0,
[2025-06-04 15:22:35]     "pilotErrorDiag": "",
[2025-06-04 15:22:35]  *** Listing of results directory ***
[2025-06-04 15:22:35] total 393120
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:03 pilot3.tar.gz
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc      5111 Jun  3 18:24 queuedata.json
[2025-06-04 15:22:35] -rwx------. 1 boinc boinc     37140 Jun  3 18:25 runpilot2-wrapper.sh
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc       100 Jun  4 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:22:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 10:54 run_atlas
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc       105 Jun  4 10:54 job.xml
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc      6392 Jun  4 10:54 init_data.xml
[2025-06-04 15:22:35] -rw-r--r--. 2 boinc boinc 213103114 Jun  4 10:54 EVNT.45006593._001551.pool.root.1
[2025-06-04 15:22:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:54 start_atlas.sh
[2025-06-04 15:22:35] drwxrwx--x. 2 boinc boinc        68 Jun  4 10:54 shared
[2025-06-04 15:22:35] -rw-r--r--. 2 boinc boinc    508886 Jun  4 10:54 input.tar.gz
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc         0 Jun  4 10:54 boinc_lockfile
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc      2525 Jun  4 11:05 pandaJob.out
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc    986774 Jun  4 11:08 agis_schedconf.cvmfs.json
[2025-06-04 15:22:35] drwx------. 4 boinc boinc      4096 Jun  4 11:08 pilot3
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc 182414453 Jun  4 15:03 HITS.45006595._038660.pool.root.1
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc       531 Jun  4 15:03 boinc_task_state.xml
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc      1016 Jun  4 15:04 memory_monitor_summary.json
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc   1598969 Jun  4 15:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc    393137 Jun  4 15:04 log.45006595._038660.job.log.tgz.1
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc        95 Jun  4 15:06 pilot_heartbeat.json
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc      7694 Jun  4 15:06 heartbeat.json
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc      4416 Jun  4 15:06 pilotlog.txt
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc   1218403 Jun  4 15:06 log.45006595._038660.job.log.1
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc       357 Jun  4 15:06 output.list
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc       620 Jun  4 15:06 runtime_log
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc   1628160 Jun  4 15:06 result.tar.gz
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc       657 Jun  4 15:06 uGHODmHdjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm12kKDm7fljmn.diag
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc      8659 Jun  4 15:06 runtime_log.err
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc      8192 Jun  4 15:22 boinc_mmap_file
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc        28 Jun  4 15:22 wrapper_checkpoint.txt
[2025-06-04 15:22:35] -rw-r--r--. 1 boinc boinc     20522 Jun  4 15:22 stderr.txt
[2025-06-04 15:22:35] HITS file was successfully produced:
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc 182414453 Jun  4 15:03 shared/HITS.pool.root.1
[2025-06-04 15:22:35]  *** Contents of shared directory: ***
[2025-06-04 15:22:35] total 388360
[2025-06-04 15:22:35] -rw-r--r--. 2 boinc boinc 213103114 Jun  4 10:54 ATLAS.root_0
[2025-06-04 15:22:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 10:54 start_atlas.sh
[2025-06-04 15:22:35] -rw-r--r--. 2 boinc boinc    508886 Jun  4 10:54 input.tar.gz
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc 182414453 Jun  4 15:03 HITS.pool.root.1
[2025-06-04 15:22:35] -rw-------. 1 boinc boinc   1628160 Jun  4 15:06 result.tar.gz
15:22:37 (23745): run_atlas exited; CPU time 50974.321002
15:22:37 (23745): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN