Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:18:04 (2716013): wrapper (7.7.26015): starting
14:18:04 (2716013): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 14:18:04] Arguments: --nthreads 4
[2025-06-05 14:18:04] Threads: 4
[2025-06-05 14:18:04] Checking for CVMFS
[2025-06-05 14:18:04] No cvmfs_config command found, will try listing directly
[2025-06-05 14:18:04] CVMFS is ok
[2025-06-05 14:18:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 14:18:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 14:18:04] Further information can be found at the LHC@home message board.
[2025-06-05 14:18:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:18:04] Checking for apptainer binary...
[2025-06-05 14:18:04] which: no apptainer in ((null))
[2025-06-05 14:18:04] apptainer is not installed, using version from CVMFS
[2025-06-05 14:18:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:18:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-05 14:18:04] apptainer works
[2025-06-05 14:18:04] Set ATHENA_PROC_NUMBER=4
[2025-06-05 14:18:04] Set ATHENA_CORE_NUMBER=4
[2025-06-05 14:18:04] Starting ATLAS job with PandaID=6677735787
[2025-06-05 14:18:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:55:41]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:55:41] 2025-06-05 14:55:24,022 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3770425/.job.ad'
[2025-06-05 16:55:41] 2025-06-05 14:55:24,022 | INFO     | total number of processed events: 400 (read)
[2025-06-05 16:55:41] 2025-06-05 14:55:24,025 | INFO     | executing command: lscpu
[2025-06-05 16:55:41] 2025-06-05 14:55:24,082 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 16:55:41] 2025-06-05 14:55:25,607 | INFO     | monitor loop #690: job 0:6677735787 is in state 'finished'
[2025-06-05 16:55:41] 2025-06-05 14:55:25,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 16:55:41] 2025-06-05 14:55:28,081 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 16:55:41] 2025-06-05 14:55:28,081 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6677735787/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:55:41] 2025-06-05 14:55:28,082 | INFO     | extracted standard info from prmon json
[2025-06-05 16:55:41] 2025-06-05 14:55:28,083 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:55:41] 2025-06-05 14:55:28,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:55:41] 2025-06-05 14:55:28,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:55:41] 2025-06-05 14:55:28,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:55:41] 2025-06-05 14:55:28,087 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:55:41] 2025-06-05 14:55:28,087 | INFO     | sum of square deviations: 1132458442.5
[2025-06-05 16:55:41] 2025-06-05 14:55:28,088 | INFO     | sum of deviations: 8439723503.000003
[2025-06-05 16:55:41] 2025-06-05 14:55:28,088 | INFO     | mean x: 1749130587.5
[2025-06-05 16:55:41] 2025-06-05 14:55:28,088 | INFO     | mean y: 2336061.051948052
[2025-06-05 16:55:41] 2025-06-05 14:55:28,088 | INFO     | -- intersect: -13033178510.72445
[2025-06-05 16:55:41] 2025-06-05 14:55:28,088 | INFO     | intersect: -13033178510.72445
[2025-06-05 16:55:41] 2025-06-05 14:55:28,089 | INFO     | chi2: 1.7719882739035517
[2025-06-05 16:55:41] 2025-06-05 14:55:28,089 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,090 | INFO     | sum of deviations: 8484753824.999998
[2025-06-05 16:55:41] 2025-06-05 14:55:28,090 | INFO     | mean x: 1749130435.0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,090 | INFO     | mean y: 2336125.912751678
[2025-06-05 16:55:41] 2025-06-05 14:55:28,090 | INFO     | -- intersect: -14466839098.86334
[2025-06-05 16:55:41] 2025-06-05 14:55:28,090 | INFO     | intersect: -14466839098.86334
[2025-06-05 16:55:41] 2025-06-05 14:55:28,091 | INFO     | chi2: 1.7741051099510394
[2025-06-05 16:55:41] 2025-06-05 14:55:28,091 | INFO     | current chi2=1.7741051099510394 (change=-0.11946106408618985 %)
[2025-06-05 16:55:41] 2025-06-05 14:55:28,091 | INFO     | right removable region: 148
[2025-06-05 16:55:41] 2025-06-05 14:55:28,091 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,092 | INFO     | sum of deviations: -17458009009.0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,092 | INFO     | mean x: 1749130740.0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,092 | INFO     | mean y: 2372617.4429530203
[2025-06-05 16:55:41] 2025-06-05 14:55:28,092 | INFO     | -- intersect: 29773776795.326702
[2025-06-05 16:55:41] 2025-06-05 14:55:28,092 | INFO     | intersect: 29773776795.326702
[2025-06-05 16:55:41] 2025-06-05 14:55:28,093 | INFO     | chi2: 0.04226871584299322
[2025-06-05 16:55:41] 2025-06-05 14:55:28,093 | INFO     | current chi2=0.04226871584299322 (change=97.6146165036477 %)
[2025-06-05 16:55:41] 2025-06-05 14:55:28,093 | INFO     | sum of square deviations: 925859220.0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,094 | INFO     | sum of deviations: -16981542126.5
[2025-06-05 16:55:41] 2025-06-05 14:55:28,094 | INFO     | mean x: 1749130892.5
[2025-06-05 16:55:41] 2025-06-05 14:55:28,094 | INFO     | mean y: 2371850.6319444445
[2025-06-05 16:55:41] 2025-06-05 14:55:28,094 | INFO     | -- intersect: 32083858208.51613
[2025-06-05 16:55:41] 2025-06-05 14:55:28,094 | INFO     | intersect: 32083858208.51613
[2025-06-05 16:55:41] 2025-06-05 14:55:28,095 | INFO     | chi2: 0.03590362072911384
[2025-06-05 16:55:41] 2025-06-05 14:55:28,095 | INFO     | current chi2=0.03590362072911384 (change=15.058643223329685 %)
[2025-06-05 16:55:41] 2025-06-05 14:55:28,095 | INFO     | left removable region: 20
[2025-06-05 16:55:41] 2025-06-05 14:55:28,095 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,096 | INFO     | sum of deviations: -12009193830.0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,096 | INFO     | mean x: 1749131014.5
[2025-06-05 16:55:41] 2025-06-05 14:55:28,096 | INFO     | mean y: 2366043.5
[2025-06-05 16:55:41] 2025-06-05 14:55:28,096 | INFO     | -- intersect: 32306222371.28465
[2025-06-05 16:55:41] 2025-06-05 14:55:28,096 | INFO     | intersect: 32306222371.28465
[2025-06-05 16:55:41] 2025-06-05 14:55:28,096 | INFO     | chi2: 0.03162028726356347
[2025-06-05 16:55:41] 2025-06-05 14:55:28,096 | INFO     | -- intersect: 32306222371.28465
[2025-06-05 16:55:41] 2025-06-05 14:55:28,097 | INFO     | current memory leak: -18.47 B/s (using 128 data points, chi2=0.03)
[2025-06-05 16:55:41] 2025-06-05 14:55:28,097 | INFO     | ..............................
[2025-06-05 16:55:41] 2025-06-05 14:55:28,097 | INFO     | . Timing measurements:
[2025-06-05 16:55:41] 2025-06-05 14:55:28,097 | INFO     | . get job = 0 s
[2025-06-05 16:55:41] 2025-06-05 14:55:28,097 | INFO     | . initial setup = 1 s
[2025-06-05 16:55:41] 2025-06-05 14:55:28,098 | INFO     | . payload setup = 6 s
[2025-06-05 16:55:41] 2025-06-05 14:55:28,098 | INFO     | . stage-in = 0 s
[2025-06-05 16:55:41] 2025-06-05 14:55:28,098 | INFO     | . payload execution = 9398 s
[2025-06-05 16:55:41] 2025-06-05 14:55:28,098 | INFO     | . stage-out = 0 s
[2025-06-05 16:55:41] 2025-06-05 14:55:28,098 | INFO     | . log creation = 0 s
[2025-06-05 16:55:41] 2025-06-05 14:55:28,098 | INFO     | ..............................
[2025-06-05 16:55:41] 2025-06-05 14:55:28,207 | INFO     | 
[2025-06-05 16:55:41] 2025-06-05 14:55:28,208 | INFO     | job summary report
[2025-06-05 16:55:41] 2025-06-05 14:55:28,208 | INFO     | --------------------------------------------------
[2025-06-05 16:55:41] 2025-06-05 14:55:28,208 | INFO     | PanDA job id: 6677735787
[2025-06-05 16:55:41] 2025-06-05 14:55:28,208 | INFO     | task id: 45006595
[2025-06-05 16:55:41] 2025-06-05 14:55:28,208 | INFO     | errors: (none)
[2025-06-05 16:55:41] 2025-06-05 14:55:28,208 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:55:41] 2025-06-05 14:55:28,208 | INFO     | pilot state: finished 
[2025-06-05 16:55:41] 2025-06-05 14:55:28,208 | INFO     | transexitcode: 0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,208 | INFO     | exeerrorcode: 0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | exeerrordiag: 
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | exitcode: 0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | exitmsg: OK
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | cpuconsumptiontime: 35772 s
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | nevents: 400
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | neventsw: 0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | pid: 2742698
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | pgrp: 2742698
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | corecount: 4
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | event service: False
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | sizes: {0: 2397176, 1: 2397375, 5: 2397581, 11: 2397637, 9408: 2425899, 9411: 2435046, 9418: 2435188}
[2025-06-05 16:55:41] 2025-06-05 14:55:28,209 | INFO     | --------------------------------------------------
[2025-06-05 16:55:41] 2025-06-05 14:55:28,210 | INFO     | 
[2025-06-05 16:55:41] 2025-06-05 14:55:28,210 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-06-05 16:55:41] 2025-06-05 14:55:28,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:55:41] 2025-06-05 14:55:28,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:55:41] 2025-06-05 14:55:28,233 | INFO     | job 6677735787 has completed (purged errors)
[2025-06-05 16:55:41] 2025-06-05 14:55:28,234 | INFO     | overall cleanup function is called
[2025-06-05 16:55:41] 2025-06-05 14:55:29,240 | INFO     | --- collectZombieJob: --- 10, [2742698]
[2025-06-05 16:55:41] 2025-06-05 14:55:29,240 | INFO     | zombie collector waiting for pid 2742698
[2025-06-05 16:55:41] 2025-06-05 14:55:29,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:55:41] 2025-06-05 14:55:29,241 | INFO     | collected zombie processes
[2025-06-05 16:55:41] 2025-06-05 14:55:29,241 | INFO     | will attempt to kill all subprocesses of pid=2742698
[2025-06-05 16:55:41] 2025-06-05 14:55:29,611 | INFO     | process IDs to be killed: [2742698] (in reverse order)
[2025-06-05 16:55:41] 2025-06-05 14:55:29,722 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:55:41] 2025-06-05 14:55:29,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:55:41] 2025-06-05 14:55:29,734 | INFO     | did not find any defunct processes belonging to 2742698
[2025-06-05 16:55:41] 2025-06-05 14:55:29,746 | INFO     | did not find any defunct processes belonging to 2742698
[2025-06-05 16:55:41] 2025-06-05 14:55:29,746 | INFO     | ready for new job
[2025-06-05 16:55:41] 2025-06-05 14:55:29,747 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:55:41] 2025-06-05 14:55:29,749 | INFO     | **************************************
[2025-06-05 16:55:41] 2025-06-05 14:55:29,749 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:55:41] 2025-06-05 14:55:29,749 | INFO     | **************************************
[2025-06-05 16:55:41] 2025-06-05 14:55:29,749 | INFO     | 
[2025-06-05 16:55:41] 2025-06-05 14:55:29,753 | INFO     | architecture information:
[2025-06-05 16:55:41] 2025-06-05 14:55:29,754 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:55:41] 2025-06-05 14:55:29,769 | INFO     | cat /etc/os-release:
[2025-06-05 16:55:41] NAME="CentOS Linux"
[2025-06-05 16:55:41] VERSION="7 (Core)"
[2025-06-05 16:55:41] ID="centos"
[2025-06-05 16:55:41] ID_LIKE="rhel fedora"
[2025-06-05 16:55:41] VERSION_ID="7"
[2025-06-05 16:55:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:55:41] ANSI_COLOR="0;31"
[2025-06-05 16:55:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:55:41] HOME_URL="https://www.centos.org/"
[2025-06-05 16:55:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:55:41] 
[2025-06-05 16:55:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:55:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:55:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:55:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:55:41] 
[2025-06-05 16:55:41] 2025-06-05 14:55:29,770 | INFO     | **************************************
[2025-06-05 16:55:41] 2025-06-05 14:55:30,272 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-06-05 16:55:41] 2025-06-05 14:55:30,289 | INFO     | sufficient remaining disk space (670898847744 B)
[2025-06-05 16:55:41] 2025-06-05 14:55:30,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:55:41] 2025-06-05 14:55:30,289 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:55:41] 2025-06-05 14:55:30,289 | INFO     | update_server=False
[2025-06-05 16:55:41] 2025-06-05 14:55:30,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:55:41] 2025-06-05 14:55:30,619 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 16:55:41] 2025-06-05 14:55:30,619 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 16:55:41] 2025-06-05 14:55:30,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:55:41] 2025-06-05 14:55:30,620 | INFO     | will abort loop
[2025-06-05 16:55:41] 2025-06-05 14:55:30,641 | INFO     | all job control threads have been joined
[2025-06-05 16:55:41] 2025-06-05 14:55:31,128 | INFO     | all payload control threads have been joined
[2025-06-05 16:55:41] 2025-06-05 14:55:31,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:55:41] 2025-06-05 14:55:31,226 | INFO     | all data control threads have been joined
[2025-06-05 16:55:41] 2025-06-05 14:55:31,250 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:55:41] 2025-06-05 14:55:31,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:55:41] 2025-06-05 14:55:31,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:55:41] 2025-06-05 14:55:31,295 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:31,479 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:31,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:55:41] 2025-06-05 14:55:31,624 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:31,647 | INFO     | [job] control thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:31,832 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:31,987 | INFO     | [job] validate thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:32,134 | INFO     | [payload] control thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:32,203 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:32,205 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:32,231 | INFO     | [data] control thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:32,383 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:32,596 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:32,676 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:33,141 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:33,217 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:55:41] 2025-06-05 14:55:34,222 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:35,565 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:55:41] 2025-06-05 14:55:35,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22719273568064)>', '<ExcThread(monitor, started 22719038985984)>']
[2025-06-05 16:55:41] 2025-06-05 14:55:36,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:55:41] 2025-06-05 14:55:36,275 | INFO     | [monitor] control thread has ended
[2025-06-05 16:55:41] 2025-06-05 14:55:40,833 | INFO     | all workflow threads have been joined
[2025-06-05 16:55:41] 2025-06-05 14:55:40,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:55:41] 2025-06-05 14:55:40,834 | INFO     | traces error code: 0
[2025-06-05 16:55:41] 2025-06-05 14:55:40,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:55:41] 2025-06-05 14:55:40,987 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:55:41] 2025-06-05 14:55:40,990 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:55:41] 2025-06-05 14:55:40,992 [wrapper] pilotpid: 2721919
[2025-06-05 16:55:41] 2025-06-05 14:55:40,995 [wrapper] Pilot exit status: 0
[2025-06-05 16:55:41] 2025-06-05 14:55:41,004 [wrapper] pandaids: 6677735787
[2025-06-05 16:55:41] 2025-06-05 14:55:41,075 [wrapper] cleanup supervisor_pilot 2968647 2721920
[2025-06-05 16:55:41] 2025-06-05 14:55:41,078 [wrapper] Test setup, not cleaning
[2025-06-05 16:55:41] 2025-06-05 14:55:41,081 [wrapper] apfmon messages muted
[2025-06-05 16:55:41] 2025-06-05 14:55:41,083 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:55:41] 2025-06-05 14:55:41,086 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:55:41]  *** Error codes and diagnostics ***
[2025-06-05 16:55:41]     "exeErrorCode": 0,
[2025-06-05 16:55:41]     "exeErrorDiag": "",
[2025-06-05 16:55:41]     "pilotErrorCode": 0,
[2025-06-05 16:55:41]     "pilotErrorDiag": "",
[2025-06-05 16:55:41]  *** Listing of results directory ***
[2025-06-05 16:55:41] total 391304
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:03 pilot3.tar.gz
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc      5111 Jun  3 18:14 queuedata.json
[2025-06-05 16:55:41] -rwx------ 1 boinc boinc     37140 Jun  3 18:14 runpilot2-wrapper.sh
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc       100 Jun  5 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:55:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 14:17 run_atlas
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc       105 Jun  5 14:17 job.xml
[2025-06-05 16:55:41] -rw-r--r-- 2 boinc boinc 216135802 Jun  5 14:18 EVNT.45006593._001541.pool.root.1
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc      6636 Jun  5 14:18 init_data.xml
[2025-06-05 16:55:41] -rw-r--r-- 2 boinc boinc     15093 Jun  5 14:18 start_atlas.sh
[2025-06-05 16:55:41] drwxrwx--x 2 boinc boinc      4096 Jun  5 14:18 shared
[2025-06-05 16:55:41] -rw-r--r-- 2 boinc boinc    508883 Jun  5 14:18 input.tar.gz
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc         0 Jun  5 14:18 boinc_lockfile
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc      2522 Jun  5 14:18 pandaJob.out
[2025-06-05 16:55:41] -rw------- 1 boinc boinc    983210 Jun  5 14:18 agis_schedconf.cvmfs.json
[2025-06-05 16:55:41] -rw------- 1 boinc boinc   1598969 Jun  5 14:18 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:55:41] drwx------ 4 boinc boinc      4096 Jun  5 14:18 pilot3
[2025-06-05 16:55:41] -rw------- 1 boinc boinc 178385968 Jun  5 16:54 HITS.45006595._038384.pool.root.1
[2025-06-05 16:55:41] -rw------- 1 boinc boinc        95 Jun  5 16:54 pilot_heartbeat.json
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc       528 Jun  5 16:54 boinc_task_state.xml
[2025-06-05 16:55:41] -rw------- 1 boinc boinc      1033 Jun  5 16:55 memory_monitor_summary.json
[2025-06-05 16:55:41] -rw------- 1 boinc boinc    276789 Jun  5 16:55 log.45006595._038384.job.log.tgz.1
[2025-06-05 16:55:41] -rw------- 1 boinc boinc      7724 Jun  5 16:55 heartbeat.json
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc      8192 Jun  5 16:55 boinc_mmap_file
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc        27 Jun  5 16:55 wrapper_checkpoint.txt
[2025-06-05 16:55:41] -rw------- 1 boinc boinc      4549 Jun  5 16:55 pilotlog.txt
[2025-06-05 16:55:41] -rw------- 1 boinc boinc    895699 Jun  5 16:55 log.45006595._038384.job.log.1
[2025-06-05 16:55:41] -rw------- 1 boinc boinc       357 Jun  5 16:55 output.list
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc       620 Jun  5 16:55 runtime_log
[2025-06-05 16:55:41] -rw------- 1 boinc boinc   1187840 Jun  5 16:55 result.tar.gz
[2025-06-05 16:55:41] -rw------- 1 boinc boinc       662 Jun  5 16:55 xJcLDmOSjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz0kKDmDFVH5n.diag
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc      9025 Jun  5 16:55 runtime_log.err
[2025-06-05 16:55:41] -rw-r--r-- 1 boinc boinc     20908 Jun  5 16:55 stderr.txt
[2025-06-05 16:55:41] HITS file was successfully produced:
[2025-06-05 16:55:41] -rw------- 1 boinc boinc 178385968 Jun  5 16:54 shared/HITS.pool.root.1
[2025-06-05 16:55:41]  *** Contents of shared directory: ***
[2025-06-05 16:55:41] total 386964
[2025-06-05 16:55:41] -rw-r--r-- 2 boinc boinc 216135802 Jun  5 14:18 ATLAS.root_0
[2025-06-05 16:55:41] -rw-r--r-- 2 boinc boinc     15093 Jun  5 14:18 start_atlas.sh
[2025-06-05 16:55:41] -rw-r--r-- 2 boinc boinc    508883 Jun  5 14:18 input.tar.gz
[2025-06-05 16:55:41] -rw------- 1 boinc boinc 178385968 Jun  5 16:54 HITS.pool.root.1
[2025-06-05 16:55:41] -rw------- 1 boinc boinc   1187840 Jun  5 16:55 result.tar.gz
16:55:43 (2716013): run_atlas exited; CPU time 36142.254246
16:55:43 (2716013): called boinc_finish(0)

</stderr_txt>
]]>

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