Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:41:14 (1789291): wrapper (7.7.26015): starting
14:41:14 (1789291): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:41:14] Arguments: --nthreads 8
[2025-06-03 14:41:14] Threads: 8
[2025-06-03 14:41:14] Checking for CVMFS
[2025-06-03 14:41:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:41:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:41:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:41:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:41:15] 2.12.6.0 814677 89576 891752 146752 2 441 11275485 21551105 8913 16776704 1 293990324 99.328 537202820 27517 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 14:41:15] CVMFS is ok
[2025-06-03 14:41:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:41:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:41:15] Further information can be found at the LHC@home message board.
[2025-06-03 14:41:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:41:15] Checking for apptainer binary...
[2025-06-03 14:41:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:41:15] Running /usr/bin/apptainer --version
[2025-06-03 14:41:15] apptainer version 1.4.1-1.el9
[2025-06-03 14:41:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:41:15] c-16-30.aglt2.org
[2025-06-03 14:41:15] apptainer works
[2025-06-03 14:41:15] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:41:15] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:41:15] Starting ATLAS job with PandaID=6677735756
[2025-06-03 14:41:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:46:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:46:21] 2025-06-04 04:46:07,497 | INFO     | using path: /var/lib/condor/boinchome/slots/2/PanDA_Pilot-6677735756/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:46:21] 2025-06-04 04:46:07,498 | INFO     | extracted standard info from prmon json
[2025-06-04 00:46:21] 2025-06-04 04:46:07,498 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:46:21] 2025-06-04 04:46:07,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:46:21] 2025-06-04 04:46:07,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:46:21] 2025-06-04 04:46:07,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:46:21] 2025-06-04 04:46:07,516 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:46:21] 2025-06-04 04:46:07,517 | INFO     | sum of square deviations: 64988235369.10433
[2025-06-04 00:46:21] 2025-06-04 04:46:07,526 | INFO     | sum of deviations: 169140743174.9833
[2025-06-04 00:46:21] 2025-06-04 04:46:07,527 | INFO     | mean x: 1748994238.8922558
[2025-06-04 00:46:21] 2025-06-04 04:46:07,527 | INFO     | mean y: 2048867.4528619528
[2025-06-04 00:46:21] 2025-06-04 04:46:07,527 | INFO     | -- intersect: -4549947100.661043
[2025-06-04 00:46:21] 2025-06-04 04:46:07,527 | INFO     | intersect: -4549947100.661043
[2025-06-04 00:46:21] 2025-06-04 04:46:07,528 | INFO     | chi2: 4.3856447653864805
[2025-06-04 00:46:21] 2025-06-04 04:46:07,529 | INFO     | sum of square deviations: 63360882766.40404
[2025-06-04 00:46:21] 2025-06-04 04:46:07,539 | INFO     | sum of deviations: 211777095036.46014
[2025-06-04 00:46:21] 2025-06-04 04:46:07,540 | INFO     | mean x: 1748994086.3921902
[2025-06-04 00:46:21] 2025-06-04 04:46:07,540 | INFO     | mean y: 2052845.5348047537
[2025-06-04 00:46:21] 2025-06-04 04:46:07,540 | INFO     | -- intersect: -5843776168.837481
[2025-06-04 00:46:21] 2025-06-04 04:46:07,540 | INFO     | intersect: -5843776168.837481
[2025-06-04 00:46:21] 2025-06-04 04:46:07,541 | INFO     | chi2: 3.680381044898196
[2025-06-04 00:46:21] 2025-06-04 04:46:07,541 | INFO     | current chi2=3.680381044898196 (change=16.08118664910002 %)
[2025-06-04 00:46:21] 2025-06-04 04:46:07,541 | INFO     | right removable region: 588
[2025-06-04 00:46:21] 2025-06-04 04:46:07,543 | INFO     | sum of square deviations: 63360812860.828514
[2025-06-04 00:46:21] 2025-06-04 04:46:07,553 | INFO     | sum of deviations: 54944580021.631615
[2025-06-04 00:46:21] 2025-06-04 04:46:07,553 | INFO     | mean x: 1748994391.3955858
[2025-06-04 00:46:21] 2025-06-04 04:46:07,553 | INFO     | mean y: 2059554.4736842106
[2025-06-04 00:46:21] 2025-06-04 04:46:07,553 | INFO     | -- intersect: -1514615468.4067445
[2025-06-04 00:46:21] 2025-06-04 04:46:07,553 | INFO     | intersect: -1514615468.4067445
[2025-06-04 00:46:21] 2025-06-04 04:46:07,554 | INFO     | chi2: 2.2348420413713894
[2025-06-04 00:46:21] 2025-06-04 04:46:07,555 | INFO     | current chi2=2.2348420413713894 (change=49.041881845748485 %)
[2025-06-04 00:46:21] 2025-06-04 04:46:07,555 | INFO     | sum of square deviations: 61760786215.03968
[2025-06-04 00:46:21] 2025-06-04 04:46:07,565 | INFO     | sum of deviations: -21464048804.710625
[2025-06-04 00:46:21] 2025-06-04 04:46:07,565 | INFO     | mean x: 1748994543.8989725
[2025-06-04 00:46:21] 2025-06-04 04:46:07,565 | INFO     | mean y: 2066833.6489726028
[2025-06-04 00:46:21] 2025-06-04 04:46:07,566 | INFO     | -- intersect: 609904048.0055228
[2025-06-04 00:46:21] 2025-06-04 04:46:07,566 | INFO     | intersect: 609904048.0055228
[2025-06-04 00:46:21] 2025-06-04 04:46:07,567 | INFO     | chi2: 1.3529037942671698
[2025-06-04 00:46:21] 2025-06-04 04:46:07,567 | INFO     | current chi2=1.3529037942671698 (change=39.463113310819345 %)
[2025-06-04 00:46:21] 2025-06-04 04:46:07,568 | INFO     | sum of square deviations: 60187922869.23668
[2025-06-04 00:46:21] 2025-06-04 04:46:07,578 | INFO     | sum of deviations: -35826663694.81174
[2025-06-04 00:46:21] 2025-06-04 04:46:07,578 | INFO     | mean x: 1748994696.402418
[2025-06-04 00:46:21] 2025-06-04 04:46:07,578 | INFO     | mean y: 2068217.4369602764
[2025-06-04 00:46:21] 2025-06-04 04:46:07,578 | INFO     | -- intersect: 1043151574.4445496
[2025-06-04 00:46:21] 2025-06-04 04:46:07,579 | INFO     | intersect: 1043151574.4445496
[2025-06-04 00:46:21] 2025-06-04 04:46:07,580 | INFO     | chi2: 1.2589236363275074
[2025-06-04 00:46:21] 2025-06-04 04:46:07,580 | INFO     | current chi2=1.2589236363275074 (change=6.946551435356779 %)
[2025-06-04 00:46:21] 2025-06-04 04:46:07,580 | INFO     | left removable region: 30
[2025-06-04 00:46:21] 2025-06-04 04:46:07,581 | INFO     | sum of square deviations: 53873512897.154144
[2025-06-04 00:46:21] 2025-06-04 04:46:07,590 | INFO     | sum of deviations: 44881166431.05018
[2025-06-04 00:46:21] 2025-06-04 04:46:07,590 | INFO     | mean x: 1748994970.90681
[2025-06-04 00:46:21] 2025-06-04 04:46:07,590 | INFO     | mean y: 2069036.5394265233
[2025-06-04 00:46:21] 2025-06-04 04:46:07,590 | INFO     | -- intersect: -1454990846.0450056
[2025-06-04 00:46:21] 2025-06-04 04:46:07,591 | INFO     | intersect: -1454990846.0450056
[2025-06-04 00:46:21] 2025-06-04 04:46:07,592 | INFO     | chi2: 0.46374379657420867
[2025-06-04 00:46:21] 2025-06-04 04:46:07,592 | INFO     | -- intersect: -1454990846.0450056
[2025-06-04 00:46:21] 2025-06-04 04:46:07,592 | INFO     | current memory leak: 0.83 B/s (using 558 data points, chi2=0.46)
[2025-06-04 00:46:21] 2025-06-04 04:46:07,593 | INFO     | ..............................
[2025-06-04 00:46:21] 2025-06-04 04:46:07,593 | INFO     | . Timing measurements:
[2025-06-04 00:46:21] 2025-06-04 04:46:07,594 | INFO     | . get job = 0 s
[2025-06-04 00:46:21] 2025-06-04 04:46:07,594 | INFO     | . initial setup = 4 s
[2025-06-04 00:46:21] 2025-06-04 04:46:07,594 | INFO     | . payload setup = 13 s
[2025-06-04 00:46:21] 2025-06-04 04:46:07,594 | INFO     | . stage-in = 0 s
[2025-06-04 00:46:21] 2025-06-04 04:46:07,594 | INFO     | . payload execution = 36206 s
[2025-06-04 00:46:21] 2025-06-04 04:46:07,594 | INFO     | . stage-out = 3 s
[2025-06-04 00:46:21] 2025-06-04 04:46:07,595 | INFO     | . log creation = 0 s
[2025-06-04 00:46:21] 2025-06-04 04:46:07,595 | INFO     | ..............................
[2025-06-04 00:46:21] 2025-06-04 04:46:07,745 | INFO     | 
[2025-06-04 00:46:21] 2025-06-04 04:46:07,745 | INFO     | job summary report
[2025-06-04 00:46:21] 2025-06-04 04:46:07,745 | INFO     | --------------------------------------------------
[2025-06-04 00:46:21] 2025-06-04 04:46:07,745 | INFO     | PanDA job id: 6677735756
[2025-06-04 00:46:21] 2025-06-04 04:46:07,745 | INFO     | task id: 45006595
[2025-06-04 00:46:21] 2025-06-04 04:46:07,746 | INFO     | errors: (none)
[2025-06-04 00:46:21] 2025-06-04 04:46:07,746 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:46:21] 2025-06-04 04:46:07,746 | INFO     | pilot state: finished 
[2025-06-04 00:46:21] 2025-06-04 04:46:07,746 | INFO     | transexitcode: 0
[2025-06-04 00:46:21] 2025-06-04 04:46:07,746 | INFO     | exeerrorcode: 0
[2025-06-04 00:46:21] 2025-06-04 04:46:07,746 | INFO     | exeerrordiag: 
[2025-06-04 00:46:21] 2025-06-04 04:46:07,746 | INFO     | exitcode: 0
[2025-06-04 00:46:21] 2025-06-04 04:46:07,747 | INFO     | exitmsg: OK
[2025-06-04 00:46:21] 2025-06-04 04:46:07,747 | INFO     | cpuconsumptiontime: 69361 s
[2025-06-04 00:46:21] 2025-06-04 04:46:07,747 | INFO     | nevents: 400
[2025-06-04 00:46:21] 2025-06-04 04:46:07,747 | INFO     | neventsw: 0
[2025-06-04 00:46:21] 2025-06-04 04:46:07,747 | INFO     | pid: 1808067
[2025-06-04 00:46:21] 2025-06-04 04:46:07,747 | INFO     | pgrp: 1808067
[2025-06-04 00:46:21] 2025-06-04 04:46:07,747 | INFO     | corecount: 8
[2025-06-04 00:46:21] 2025-06-04 04:46:07,748 | INFO     | event service: False
[2025-06-04 00:46:21] 2025-06-04 04:46:07,748 | INFO     | sizes: {0: 2405024, 1: 2405052, 2: 2405251, 10: 2405457, 13: 2405485, 36223: 2445118, 36226: 2454081, 36228: 2454137, 36241: 2454307}
[2025-06-04 00:46:21] 2025-06-04 04:46:07,748 | INFO     | --------------------------------------------------
[2025-06-04 00:46:21] 2025-06-04 04:46:07,748 | INFO     | 
[2025-06-04 00:46:21] 2025-06-04 04:46:07,748 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/2
[2025-06-04 00:46:21] 2025-06-04 04:46:07,777 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,778 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,778 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,780 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:46:21] 2025-06-04 04:46:07,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,781 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:46:21] 2025-06-04 04:46:07,781 | INFO     | job 6677735756 has completed (purged errors)
[2025-06-04 00:46:21] 2025-06-04 04:46:07,781 | INFO     | overall cleanup function is called
[2025-06-04 00:46:21] 2025-06-04 04:46:08,790 | INFO     | --- collectZombieJob: --- 10, [1808067]
[2025-06-04 00:46:21] 2025-06-04 04:46:08,790 | INFO     | zombie collector waiting for pid 1808067
[2025-06-04 00:46:21] 2025-06-04 04:46:08,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:46:21] 2025-06-04 04:46:08,790 | INFO     | collected zombie processes
[2025-06-04 00:46:21] 2025-06-04 04:46:08,790 | INFO     | will attempt to kill all subprocesses of pid=1808067
[2025-06-04 00:46:21] 2025-06-04 04:46:09,304 | INFO     | process IDs to be killed: [1808067] (in reverse order)
[2025-06-04 00:46:21] 2025-06-04 04:46:09,431 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:46:21] 2025-06-04 04:46:09,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:46:21] 2025-06-04 04:46:09,451 | INFO     | did not find any defunct processes belonging to 1808067
[2025-06-04 00:46:21] 2025-06-04 04:46:09,471 | INFO     | did not find any defunct processes belonging to 1808067
[2025-06-04 00:46:21] 2025-06-04 04:46:09,471 | INFO     | ready for new job
[2025-06-04 00:46:21] 2025-06-04 04:46:09,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:46:21] 2025-06-04 04:46:09,474 | INFO     | **************************************
[2025-06-04 00:46:21] 2025-06-04 04:46:09,475 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:46:21] 2025-06-04 04:46:09,475 | INFO     | **************************************
[2025-06-04 00:46:21] 2025-06-04 04:46:09,475 | INFO     | 
[2025-06-04 00:46:21] 2025-06-04 04:46:09,489 | INFO     | architecture information:
[2025-06-04 00:46:21] 2025-06-04 04:46:09,490 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:46:21] 2025-06-04 04:46:09,508 | INFO     | cat /etc/os-release:
[2025-06-04 00:46:21] NAME="CentOS Linux"
[2025-06-04 00:46:21] VERSION="7 (Core)"
[2025-06-04 00:46:21] ID="centos"
[2025-06-04 00:46:21] ID_LIKE="rhel fedora"
[2025-06-04 00:46:21] VERSION_ID="7"
[2025-06-04 00:46:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:46:21] ANSI_COLOR="0;31"
[2025-06-04 00:46:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:46:21] HOME_URL="https://www.centos.org/"
[2025-06-04 00:46:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:46:21] 
[2025-06-04 00:46:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:46:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:46:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:46:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:46:21] 
[2025-06-04 00:46:21] 2025-06-04 04:46:09,509 | INFO     | **************************************
[2025-06-04 00:46:21] 2025-06-04 04:46:10,013 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/2
[2025-06-04 00:46:21] 2025-06-04 04:46:10,041 | INFO     | sufficient remaining disk space (1857129807872 B)
[2025-06-04 00:46:21] 2025-06-04 04:46:10,041 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:46:21] 2025-06-04 04:46:10,042 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:46:21] 2025-06-04 04:46:10,042 | INFO     | update_server=False
[2025-06-04 00:46:21] 2025-06-04 04:46:10,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:46:21] 2025-06-04 04:46:10,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:46:21] 2025-06-04 04:46:10,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:46:21] 2025-06-04 04:46:10,043 | INFO     | aborting loop
[2025-06-04 00:46:21] 2025-06-04 04:46:10,043 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 00:46:21] 2025-06-04 04:46:10,044 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:46:21] 2025-06-04 04:46:10,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:46:21] 2025-06-04 04:46:10,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:46:21] 2025-06-04 04:46:10,435 | INFO     | all payload control threads have been joined
[2025-06-04 00:46:21] 2025-06-04 04:46:10,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:46:21] 2025-06-04 04:46:10,615 | INFO     | all data control threads have been joined
[2025-06-04 00:46:21] 2025-06-04 04:46:10,825 | INFO     | all job control threads have been joined
[2025-06-04 00:46:21] 2025-06-04 04:46:11,048 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:11,049 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:11,186 | INFO     | [job] validate thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:11,370 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:11,440 | INFO     | [payload] control thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:11,620 | INFO     | [data] control thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:11,668 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:11,830 | INFO     | [job] control thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:12,050 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:12,137 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:12,203 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:12,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:12,338 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:12,342 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:12,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:46:21] 2025-06-04 04:46:13,764 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:14,533 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:46:21] 2025-06-04 04:46:16,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925770880832)>', '<ExcThread(monitor, started 139925429135104)>']
[2025-06-04 00:46:21] 2025-06-04 04:46:17,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:46:21] 2025-06-04 04:46:17,086 | INFO     | [monitor] control thread has ended
[2025-06-04 00:46:21] 2025-06-04 04:46:21,121 | INFO     | all workflow threads have been joined
[2025-06-04 00:46:21] 2025-06-04 04:46:21,121 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:46:21] 2025-06-04 04:46:21,121 | INFO     | traces error code: 0
[2025-06-04 00:46:21] 2025-06-04 04:46:21,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:46:21] 2025-06-04 04:46:21,306 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:46:21] 2025-06-04 04:46:21,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:46:21] 2025-06-04 04:46:21,312 [wrapper] pilotpid: 1793406
[2025-06-04 00:46:21] 2025-06-04 04:46:21,315 [wrapper] Pilot exit status: 0
[2025-06-04 00:46:21] 2025-06-04 04:46:21,328 [wrapper] pandaids: 6677735756
[2025-06-04 00:46:21] 2025-06-04 04:46:21,414 [wrapper] cleanup supervisor_pilot  485156 1793407
[2025-06-04 00:46:21] 2025-06-04 04:46:21,417 [wrapper] Test setup, not cleaning
[2025-06-04 00:46:21] 2025-06-04 04:46:21,421 [wrapper] apfmon messages muted
[2025-06-04 00:46:21] 2025-06-04 04:46:21,425 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:46:21] 2025-06-04 04:46:21,428 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:46:21]  *** Error codes and diagnostics ***
[2025-06-04 00:46:21]     "exeErrorCode": 0,
[2025-06-04 00:46:21]     "exeErrorDiag": "",
[2025-06-04 00:46:21]     "pilotErrorCode": 0,
[2025-06-04 00:46:21]     "pilotErrorDiag": "",
[2025-06-04 00:46:21]  *** Listing of results directory ***
[2025-06-04 00:46:21] total 395780
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:03 pilot3.tar.gz
[2025-06-04 00:46:21] -rwx------. 1 boincer umatlas     37140 Jun  3 12:14 runpilot2-wrapper.sh
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:14 queuedata.json
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas       100 Jun  3 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:46:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 14:41 run_atlas
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas       105 Jun  3 14:41 job.xml
[2025-06-04 00:46:21] -rw-r--r--. 2 boincer umatlas 215184474 Jun  3 14:41 EVNT.45006593._001539.pool.root.1
[2025-06-04 00:46:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:41 start_atlas.sh
[2025-06-04 00:46:21] drwxrwx--x. 2 boincer umatlas        68 Jun  3 14:41 shared
[2025-06-04 00:46:21] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 14:41 input.tar.gz
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas         0 Jun  3 14:41 boinc_lockfile
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 14:41 pandaJob.out
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas    986893 Jun  3 14:41 agis_schedconf.cvmfs.json
[2025-06-04 00:46:21] drwx------. 4 boincer umatlas      4096 Jun  3 14:41 pilot3
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas 179773400 Jun  4 00:45 HITS.45006595._038353.pool.root.1
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas       531 Jun  4 00:45 boinc_task_state.xml
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas        95 Jun  4 00:45 pilot_heartbeat.json
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas      1035 Jun  4 00:45 memory_monitor_summary.json
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas   1603667 Jun  4 00:45 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas      6549 Jun  4 00:45 init_data.xml
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas    572813 Jun  4 00:45 log.45006595._038353.job.log.tgz.1
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 00:46 boinc_mmap_file
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas        28 Jun  4 00:46 wrapper_checkpoint.txt
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas      7708 Jun  4 00:46 heartbeat.json
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas      4489 Jun  4 00:46 pilotlog.txt
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas   2674019 Jun  4 00:46 log.45006595._038353.job.log.1
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas       357 Jun  4 00:46 output.list
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas       620 Jun  4 00:46 runtime_log
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas   3266560 Jun  4 00:46 result.tar.gz
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas      8809 Jun  4 00:46 runtime_log.err
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas       657 Jun  4 00:46 MJrMDmCSjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmg0kKDmtfxN7m.diag
[2025-06-04 00:46:21] -rw-r--r--. 1 boincer umatlas     21015 Jun  4 00:46 stderr.txt
[2025-06-04 00:46:21] HITS file was successfully produced:
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas 179773400 Jun  4 00:45 shared/HITS.pool.root.1
[2025-06-04 00:46:21]  *** Contents of shared directory: ***
[2025-06-04 00:46:21] total 389416
[2025-06-04 00:46:21] -rw-r--r--. 2 boincer umatlas 215184474 Jun  3 14:41 ATLAS.root_0
[2025-06-04 00:46:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:41 start_atlas.sh
[2025-06-04 00:46:21] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 14:41 input.tar.gz
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas 179773400 Jun  4 00:45 HITS.pool.root.1
[2025-06-04 00:46:21] -rw-------. 1 boincer umatlas   3266560 Jun  4 00:46 result.tar.gz
00:46:23 (1789291): run_atlas exited; CPU time 71232.007901
00:46:23 (1789291): called boinc_finish(0)

</stderr_txt>
]]>

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