Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:35:48 (2175837): wrapper (7.7.26015): starting
14:35:48 (2175837): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 14:35:49] Arguments: --nthreads 8
[2025-06-03 14:35:49] Threads: 8
[2025-06-03 14:35:49] Checking for CVMFS
[2025-06-03 14:35:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 14:35:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 14:35:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 14:35:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 14:35:51] 2.12.6.0 3581464 138450 246996 146752 2 490 26137880 32935937 12787 130560 0 358160806 99.604 381446849 28102 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 14:35:51] CVMFS is ok
[2025-06-03 14:35:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 14:35:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 14:35:51] Further information can be found at the LHC@home message board.
[2025-06-03 14:35:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 14:35:51] Checking for apptainer binary...
[2025-06-03 14:35:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 14:35:51] Running /usr/bin/apptainer --version
[2025-06-03 14:35:51] apptainer version 1.4.1-1.el9
[2025-06-03 14:35:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 14:35:52] c-6-6.aglt2.org
[2025-06-03 14:35:52] apptainer works
[2025-06-03 14:35:52] Set ATHENA_PROC_NUMBER=8
[2025-06-03 14:35:52] Set ATHENA_CORE_NUMBER=8
[2025-06-03 14:35:52] Starting ATLAS job with PandaID=6677735648
[2025-06-03 14:35:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:44:41]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:44:41] 2025-06-03 23:44:21,063 | INFO     | extracted standard info from prmon json
[2025-06-03 19:44:41] 2025-06-03 23:44:21,063 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:44:41] 2025-06-03 23:44:21,063 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:44:41] 2025-06-03 23:44:21,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:44:41] 2025-06-03 23:44:21,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:44:41] 2025-06-03 23:44:21,070 | INFO     | fitting pss+swap vs Time
[2025-06-03 19:44:41] 2025-06-03 23:44:21,070 | INFO     | sum of square deviations: 8372403267.946649
[2025-06-03 19:44:41] 2025-06-03 23:44:21,073 | INFO     | sum of deviations: 114101917096.80006
[2025-06-03 19:44:41] 2025-06-03 23:44:21,073 | INFO     | mean x: 1748985065.6533334
[2025-06-03 19:44:41] 2025-06-03 23:44:21,073 | INFO     | mean y: 2077823.2
[2025-06-03 19:44:41] 2025-06-03 23:44:21,073 | INFO     | -- intersect: -23833676688.140118
[2025-06-03 19:44:41] 2025-06-03 23:44:21,073 | INFO     | intersect: -23833676688.140118
[2025-06-03 19:44:41] 2025-06-03 23:44:21,074 | INFO     | chi2: 4.583269312891671
[2025-06-03 19:44:41] 2025-06-03 23:44:21,074 | INFO     | sum of square deviations: 7960835956.183077
[2025-06-03 19:44:41] 2025-06-03 23:44:21,077 | INFO     | sum of deviations: 109052648784.63394
[2025-06-03 19:44:41] 2025-06-03 23:44:21,077 | INFO     | mean x: 1748984913.1728814
[2025-06-03 19:44:41] 2025-06-03 23:44:21,077 | INFO     | mean y: 2075954.654237288
[2025-06-03 19:44:41] 2025-06-03 23:44:21,077 | INFO     | -- intersect: -23956643772.226597
[2025-06-03 19:44:41] 2025-06-03 23:44:21,078 | INFO     | intersect: -23956643772.226597
[2025-06-03 19:44:41] 2025-06-03 23:44:21,078 | INFO     | chi2: 4.5842765759940365
[2025-06-03 19:44:41] 2025-06-03 23:44:21,078 | INFO     | current chi2=4.5842765759940365 (change=-0.021976956482395893 %)
[2025-06-03 19:44:41] 2025-06-03 23:44:21,078 | INFO     | right removable region: 294
[2025-06-03 19:44:41] 2025-06-03 23:44:21,079 | INFO     | sum of square deviations: 7960624896.18308
[2025-06-03 19:44:41] 2025-06-03 23:44:21,081 | INFO     | sum of deviations: 48426740163.19322
[2025-06-03 19:44:41] 2025-06-03 23:44:21,081 | INFO     | mean x: 1748985218.1728814
[2025-06-03 19:44:41] 2025-06-03 23:44:21,082 | INFO     | mean y: 2102095.349152542
[2025-06-03 19:44:41] 2025-06-03 23:44:21,082 | INFO     | -- intersect: -10637471281.652237
[2025-06-03 19:44:41] 2025-06-03 23:44:21,082 | INFO     | intersect: -10637471281.652237
[2025-06-03 19:44:41] 2025-06-03 23:44:21,082 | INFO     | chi2: 1.8612313605114863
[2025-06-03 19:44:41] 2025-06-03 23:44:21,082 | INFO     | current chi2=1.8612313605114863 (change=59.39074853672083 %)
[2025-06-03 19:44:41] 2025-06-03 23:44:21,083 | INFO     | sum of square deviations: 7562567711.686202
[2025-06-03 19:44:41] 2025-06-03 23:44:21,085 | INFO     | sum of deviations: 8536583208.07929
[2025-06-03 19:44:41] 2025-06-03 23:44:21,086 | INFO     | mean x: 1748985370.6931036
[2025-06-03 19:44:41] 2025-06-03 23:44:21,086 | INFO     | mean y: 2117369.9896551725
[2025-06-03 19:44:41] 2025-06-03 23:44:21,086 | INFO     | -- intersect: -1972127319.8877866
[2025-06-03 19:44:41] 2025-06-03 23:44:21,086 | INFO     | intersect: -1972127319.8877866
[2025-06-03 19:44:41] 2025-06-03 23:44:21,087 | INFO     | chi2: 0.9204734339304793
[2025-06-03 19:44:41] 2025-06-03 23:44:21,087 | INFO     | current chi2=0.9204734339304793 (change=50.54492131072177 %)
[2025-06-03 19:44:41] 2025-06-03 23:44:21,087 | INFO     | sum of square deviations: 7177999151.943874
[2025-06-03 19:44:41] 2025-06-03 23:44:21,089 | INFO     | sum of deviations: -8921138773.66317
[2025-06-03 19:44:41] 2025-06-03 23:44:21,090 | INFO     | mean x: 1748985523.214035
[2025-06-03 19:44:41] 2025-06-03 23:44:21,090 | INFO     | mean y: 2124266.7157894736
[2025-06-03 19:44:41] 2025-06-03 23:44:21,090 | INFO     | -- intersect: 2175841793.764376
[2025-06-03 19:44:41] 2025-06-03 23:44:21,090 | INFO     | intersect: 2175841793.764376
[2025-06-03 19:44:41] 2025-06-03 23:44:21,091 | INFO     | chi2: 0.6908077390701763
[2025-06-03 19:44:41] 2025-06-03 23:44:21,091 | INFO     | current chi2=0.6908077390701763 (change=24.950822739078525 %)
[2025-06-03 19:44:41] 2025-06-03 23:44:21,091 | INFO     | left removable region: 30
[2025-06-03 19:44:41] 2025-06-03 23:44:21,091 | INFO     | sum of square deviations: 5705317359.439401
[2025-06-03 19:44:41] 2025-06-03 23:44:21,093 | INFO     | sum of deviations: 26850739816.060608
[2025-06-03 19:44:41] 2025-06-03 23:44:21,093 | INFO     | mean x: 1748985797.7651515
[2025-06-03 19:44:41] 2025-06-03 23:44:21,094 | INFO     | mean y: 2106003.984848485
[2025-06-03 19:44:41] 2025-06-03 23:44:21,094 | INFO     | -- intersect: -8229085994.4900055
[2025-06-03 19:44:41] 2025-06-03 23:44:21,094 | INFO     | intersect: -8229085994.4900055
[2025-06-03 19:44:41] 2025-06-03 23:44:21,094 | INFO     | chi2: 0.3273020511603239
[2025-06-03 19:44:41] 2025-06-03 23:44:21,094 | INFO     | -- intersect: -8229085994.4900055
[2025-06-03 19:44:41] 2025-06-03 23:44:21,095 | INFO     | current memory leak: 4.71 B/s (using 264 data points, chi2=0.33)
[2025-06-03 19:44:41] 2025-06-03 23:44:21,095 | INFO     | ..............................
[2025-06-03 19:44:41] 2025-06-03 23:44:21,095 | INFO     | . Timing measurements:
[2025-06-03 19:44:41] 2025-06-03 23:44:21,096 | INFO     | . get job = 0 s
[2025-06-03 19:44:41] 2025-06-03 23:44:21,096 | INFO     | . initial setup = 4 s
[2025-06-03 19:44:41] 2025-06-03 23:44:21,096 | INFO     | . payload setup = 45 s
[2025-06-03 19:44:41] 2025-06-03 23:44:21,096 | INFO     | . stage-in = 0 s
[2025-06-03 19:44:41] 2025-06-03 23:44:21,096 | INFO     | . payload execution = 18324 s
[2025-06-03 19:44:41] 2025-06-03 23:44:21,096 | INFO     | . stage-out = 2 s
[2025-06-03 19:44:41] 2025-06-03 23:44:21,096 | INFO     | . log creation = 0 s
[2025-06-03 19:44:41] 2025-06-03 23:44:21,096 | INFO     | ..............................
[2025-06-03 19:44:41] 2025-06-03 23:44:21,203 | INFO     | 
[2025-06-03 19:44:41] 2025-06-03 23:44:21,203 | INFO     | job summary report
[2025-06-03 19:44:41] 2025-06-03 23:44:21,203 | INFO     | --------------------------------------------------
[2025-06-03 19:44:41] 2025-06-03 23:44:21,203 | INFO     | PanDA job id: 6677735648
[2025-06-03 19:44:41] 2025-06-03 23:44:21,203 | INFO     | task id: 45006595
[2025-06-03 19:44:41] 2025-06-03 23:44:21,203 | INFO     | errors: (none)
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | pilot state: finished 
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | transexitcode: 0
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | exeerrorcode: 0
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | exeerrordiag: 
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | exitcode: 0
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | exitmsg: OK
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | cpuconsumptiontime: 42242 s
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | nevents: 400
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | neventsw: 0
[2025-06-03 19:44:41] 2025-06-03 23:44:21,204 | INFO     | pid: 2194439
[2025-06-03 19:44:41] 2025-06-03 23:44:21,205 | INFO     | pgrp: 2194439
[2025-06-03 19:44:41] 2025-06-03 23:44:21,205 | INFO     | corecount: 8
[2025-06-03 19:44:41] 2025-06-03 23:44:21,205 | INFO     | event service: False
[2025-06-03 19:44:41] 2025-06-03 23:44:21,205 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 3: 2405268, 14: 2405268, 25: 2405296, 29: 2405658, 35: 2405686, 18373: 2437562, 18377: 2446503, 18380: 2446559, 18386: 
[2025-06-03 19:44:41] 2025-06-03 23:44:21,205 | INFO     | --------------------------------------------------
[2025-06-03 19:44:41] 2025-06-03 23:44:21,205 | INFO     | 
[2025-06-03 19:44:41] 2025-06-03 23:44:21,205 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 19:44:41] 2025-06-03 23:44:21,223 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,225 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:44:41] 2025-06-03 23:44:21,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:44:41] 2025-06-03 23:44:21,225 | INFO     | job 6677735648 has completed (purged errors)
[2025-06-03 19:44:41] 2025-06-03 23:44:21,225 | INFO     | overall cleanup function is called
[2025-06-03 19:44:41] 2025-06-03 23:44:22,233 | INFO     | --- collectZombieJob: --- 10, [2194439]
[2025-06-03 19:44:41] 2025-06-03 23:44:22,233 | INFO     | zombie collector waiting for pid 2194439
[2025-06-03 19:44:41] 2025-06-03 23:44:22,233 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:44:41] 2025-06-03 23:44:22,234 | INFO     | collected zombie processes
[2025-06-03 19:44:41] 2025-06-03 23:44:22,234 | INFO     | will attempt to kill all subprocesses of pid=2194439
[2025-06-03 19:44:41] 2025-06-03 23:44:22,574 | INFO     | process IDs to be killed: [2194439] (in reverse order)
[2025-06-03 19:44:41] 2025-06-03 23:44:22,670 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:44:41] 2025-06-03 23:44:22,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:44:41] 2025-06-03 23:44:22,683 | INFO     | did not find any defunct processes belonging to 2194439
[2025-06-03 19:44:41] 2025-06-03 23:44:22,696 | INFO     | did not find any defunct processes belonging to 2194439
[2025-06-03 19:44:41] 2025-06-03 23:44:22,696 | INFO     | ready for new job
[2025-06-03 19:44:41] 2025-06-03 23:44:22,697 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:44:41] 2025-06-03 23:44:22,698 | INFO     | **************************************
[2025-06-03 19:44:41] 2025-06-03 23:44:22,699 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:44:41] 2025-06-03 23:44:22,699 | INFO     | **************************************
[2025-06-03 19:44:41] 2025-06-03 23:44:22,699 | INFO     | 
[2025-06-03 19:44:41] 2025-06-03 23:44:22,713 | INFO     | architecture information:
[2025-06-03 19:44:41] 2025-06-03 23:44:22,713 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:44:41] 2025-06-03 23:44:22,727 | INFO     | cat /etc/os-release:
[2025-06-03 19:44:41] NAME="CentOS Linux"
[2025-06-03 19:44:41] VERSION="7 (Core)"
[2025-06-03 19:44:41] ID="centos"
[2025-06-03 19:44:41] ID_LIKE="rhel fedora"
[2025-06-03 19:44:41] VERSION_ID="7"
[2025-06-03 19:44:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:44:41] ANSI_COLOR="0;31"
[2025-06-03 19:44:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:44:41] HOME_URL="https://www.centos.org/"
[2025-06-03 19:44:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:44:41] 
[2025-06-03 19:44:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:44:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:44:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:44:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:44:41] 
[2025-06-03 19:44:41] 2025-06-03 23:44:22,728 | INFO     | **************************************
[2025-06-03 19:44:41] 2025-06-03 23:44:23,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 19:44:41] 2025-06-03 23:44:23,250 | INFO     | sufficient remaining disk space (76368838656 B)
[2025-06-03 19:44:41] 2025-06-03 23:44:23,251 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:44:41] 2025-06-03 23:44:23,251 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:44:41] 2025-06-03 23:44:23,251 | INFO     | update_server=False
[2025-06-03 19:44:41] 2025-06-03 23:44:23,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:44:41] 2025-06-03 23:44:23,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:44:41] 2025-06-03 23:44:23,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:44:41] 2025-06-03 23:44:23,253 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:44:41] 2025-06-03 23:44:23,254 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:44:41] 2025-06-03 23:44:23,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:44:41] 2025-06-03 23:44:23,255 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:44:41] 2025-06-03 23:44:23,254 | INFO     | aborting loop
[2025-06-03 19:44:41] 2025-06-03 23:44:23,290 | INFO     | all data control threads have been joined
[2025-06-03 19:44:41] 2025-06-03 23:44:24,075 | INFO     | all payload control threads have been joined
[2025-06-03 19:44:41] 2025-06-03 23:44:24,259 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:24,260 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:24,296 | INFO     | [data] control thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:24,418 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:24,523 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:24,617 | INFO     | [job] validate thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:24,887 | INFO     | all job control threads have been joined
[2025-06-03 19:44:41] 2025-06-03 23:44:24,913 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:24,942 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:25,052 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:25,081 | INFO     | [payload] control thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:25,261 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:25,426 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:25,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:44:41] 2025-06-03 23:44:25,892 | INFO     | [job] control thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:26,214 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:44:41] 2025-06-03 23:44:27,219 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:29,494 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:33,409 | INFO     | job.realtimelogging is not enabled
[2025-06-03 19:44:41] 2025-06-03 23:44:34,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:44:41] 2025-06-03 23:44:35,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635978782528)>', '<ExcThread(monitor, started 140635331876608)>']
[2025-06-03 19:44:41] 2025-06-03 23:44:36,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:44:41] 2025-06-03 23:44:36,324 | INFO     | [monitor] control thread has ended
[2025-06-03 19:44:41] 2025-06-03 23:44:40,832 | INFO     | all workflow threads have been joined
[2025-06-03 19:44:41] 2025-06-03 23:44:40,832 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:44:41] 2025-06-03 23:44:40,833 | INFO     | traces error code: 0
[2025-06-03 19:44:41] 2025-06-03 23:44:40,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:44:41] 2025-06-03 23:44:40,978 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:44:41] 2025-06-03 23:44:40,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:44:41] 2025-06-03 23:44:40,984 [wrapper] pilotpid: 2179996
[2025-06-03 19:44:41] 2025-06-03 23:44:40,986 [wrapper] Pilot exit status: 0
[2025-06-03 19:44:41] 2025-06-03 23:44:40,993 [wrapper] pandaids: 6677735648
[2025-06-03 19:44:41] 2025-06-03 23:44:41,036 [wrapper] cleanup supervisor_pilot 3696810 2179997
[2025-06-03 19:44:41] 2025-06-03 23:44:41,038 [wrapper] Test setup, not cleaning
[2025-06-03 19:44:41] 2025-06-03 23:44:41,040 [wrapper] apfmon messages muted
[2025-06-03 19:44:41] 2025-06-03 23:44:41,042 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:44:41] 2025-06-03 23:44:41,044 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:44:41]  *** Error codes and diagnostics ***
[2025-06-03 19:44:41]     "exeErrorCode": 0,
[2025-06-03 19:44:41]     "exeErrorDiag": "",
[2025-06-03 19:44:41]     "pilotErrorCode": 0,
[2025-06-03 19:44:41]     "pilotErrorDiag": "",
[2025-06-03 19:44:41]  *** Listing of results directory ***
[2025-06-03 19:44:41] total 395088
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 12:03 pilot3.tar.gz
[2025-06-03 19:44:41] -rwx------. 1 boincer umatlas     37140 Jun  3 12:11 runpilot2-wrapper.sh
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 12:11 queuedata.json
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas       100 Jun  3 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:44:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 14:35 run_atlas
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas       105 Jun  3 14:35 job.xml
[2025-06-03 19:44:41] -rw-r--r--. 2 boincer umatlas 219479984 Jun  3 14:35 EVNT.45006593._001535.pool.root.1
[2025-06-03 19:44:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:35 start_atlas.sh
[2025-06-03 19:44:41] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 14:35 shared
[2025-06-03 19:44:41] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 14:35 input.tar.gz
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas         0 Jun  3 14:35 boinc_lockfile
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 14:35 pandaJob.out
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas    986893 Jun  3 14:36 agis_schedconf.cvmfs.json
[2025-06-03 19:44:41] drwx------. 4 boincer umatlas      4096 Jun  3 14:36 pilot3
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 19:37 init_data.xml
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas        95 Jun  3 19:43 pilot_heartbeat.json
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas       530 Jun  3 19:43 boinc_task_state.xml
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas 177483980 Jun  3 19:43 HITS.45006595._038245.pool.root.1
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas      1040 Jun  3 19:44 memory_monitor_summary.json
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas   1603667 Jun  3 19:44 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas    425648 Jun  3 19:44 log.45006595._038245.job.log.tgz.1
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas      7712 Jun  3 19:44 heartbeat.json
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 19:44 boinc_mmap_file
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas        27 Jun  3 19:44 wrapper_checkpoint.txt
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas      4548 Jun  3 19:44 pilotlog.txt
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas   1458733 Jun  3 19:44 log.45006595._038245.job.log.1
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas       357 Jun  3 19:44 output.list
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas       620 Jun  3 19:44 runtime_log
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas   1904640 Jun  3 19:44 result.tar.gz
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas      8645 Jun  3 19:44 runtime_log.err
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas       653 Jun  3 19:44 6G7NDmEQjg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8DZKDmOf96Um.diag
[2025-06-03 19:44:41] -rw-r--r--. 1 boincer umatlas     20923 Jun  3 19:44 stderr.txt
[2025-06-03 19:44:41] HITS file was successfully produced:
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas 177483980 Jun  3 19:43 shared/HITS.pool.root.1
[2025-06-03 19:44:41]  *** Contents of shared directory: ***
[2025-06-03 19:44:41] total 390048
[2025-06-03 19:44:41] -rw-r--r--. 2 boincer umatlas 219479984 Jun  3 14:35 ATLAS.root_0
[2025-06-03 19:44:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 14:35 start_atlas.sh
[2025-06-03 19:44:41] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 14:35 input.tar.gz
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas 177483980 Jun  3 19:43 HITS.pool.root.1
[2025-06-03 19:44:41] -rw-------. 1 boincer umatlas   1904640 Jun  3 19:44 result.tar.gz
19:44:42 (2175837): run_atlas exited; CPU time 42924.161997
19:44:42 (2175837): called boinc_finish(0)

</stderr_txt>
]]>

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